Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-6024
         (693 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_05_0652 + 26446536-26446592,26447109-26447150,26448148-264482...    28   6.1  
03_02_0390 + 8056006-8057502                                           28   8.1  

>03_05_0652 +
           26446536-26446592,26447109-26447150,26448148-26448224,
           26448597-26448605,26448681-26448777
          Length = 93

 Score = 28.3 bits (60), Expect = 6.1
 Identities = 20/73 (27%), Positives = 33/73 (45%), Gaps = 4/73 (5%)
 Frame = -3

Query: 520 CAFFNKCIPEDVRIVTLNRPLTSLENFLSKQFLWYKLARKLIEHERQMDRCVTPSTVQI- 344
           C F   CI E V++  + +  +   NF SK  L  KL     +  ++++   +   V+I 
Sbjct: 21  CRFSLSCISEFVQVDVMEKDCSLDPNFGSKHSLNVKLILSYRQQTQEIEMHTSNDLVEIP 80

Query: 343 ---NLYDDNEDYL 314
               LY  N +YL
Sbjct: 81  TLNPLYSTNHNYL 93


>03_02_0390 + 8056006-8057502
          Length = 498

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 13/42 (30%), Positives = 18/42 (42%)
 Frame = -3

Query: 586 LGITNHPMTPYLVPLLSFGKASCAFFNKCIPEDVRIVTLNRP 461
           L   +HP  P L   L  G+ +C   + C   D+  V   RP
Sbjct: 157 LSSLDHPFVPTLYARLDAGRYACFLMDYCSGGDLHAVLRRRP 198


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,199,857
Number of Sequences: 37544
Number of extensions: 316177
Number of successful extensions: 778
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 748
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 778
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1768474200
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)