Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-6024
         (693 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY042215-1|AAK91806.1|  322|Homo sapiens G protein-coupled recep...    31   3.9  
AF474988-1|AAL86879.2|  322|Homo sapiens G protein-coupled recep...    31   3.9  
AF474987-1|AAL86878.2|  322|Homo sapiens G protein-coupled recep...    31   3.9  

>AY042215-1|AAK91806.1|  322|Homo sapiens G protein-coupled receptor
           protein.
          Length = 322

 Score = 31.1 bits (67), Expect = 3.9
 Identities = 19/52 (36%), Positives = 30/52 (57%), Gaps = 3/52 (5%)
 Frame = -3

Query: 679 CRLLRDNNVEDY-LKLTPANYHFTTDQFICNYLGITN--HPMTPYLVPLLSF 533
           CR+ R N V  Y L L  A++ F +   IC+ L + N  HP++  L P+++F
Sbjct: 54  CRMRR-NAVSIYILNLVAADFLFLSGHIICSPLRLINIRHPISKILSPVMTF 104


>AF474988-1|AAL86879.2|  322|Homo sapiens G protein-coupled receptor
           SNSR2 protein.
          Length = 322

 Score = 31.1 bits (67), Expect = 3.9
 Identities = 19/52 (36%), Positives = 30/52 (57%), Gaps = 3/52 (5%)
 Frame = -3

Query: 679 CRLLRDNNVEDY-LKLTPANYHFTTDQFICNYLGITN--HPMTPYLVPLLSF 533
           CR+ R N V  Y L L  A++ F +   IC+ L + N  HP++  L P+++F
Sbjct: 54  CRMRR-NAVSIYILNLVAADFLFLSGHIICSPLRLINISHPISKILSPVMTF 104


>AF474987-1|AAL86878.2|  322|Homo sapiens G protein-coupled receptor
           SNSR1 protein.
          Length = 322

 Score = 31.1 bits (67), Expect = 3.9
 Identities = 19/52 (36%), Positives = 30/52 (57%), Gaps = 3/52 (5%)
 Frame = -3

Query: 679 CRLLRDNNVEDY-LKLTPANYHFTTDQFICNYLGITN--HPMTPYLVPLLSF 533
           CR+ R N V  Y L L  A++ F +   IC+ L + N  HP++  L P+++F
Sbjct: 54  CRMRR-NAVSIYILNLVAADFLFLSGHIICSPLRLINIRHPISKILSPVMTF 104


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 87,138,228
Number of Sequences: 237096
Number of extensions: 1728039
Number of successful extensions: 3271
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3192
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3271
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7951235188
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)