Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-6014
         (358 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC022783-1|AAH22783.1|  986|Homo sapiens USP34 protein protein.        28   7.4  
AJ586138-1|CAE51938.1| 3395|Homo sapiens ubiquitin-specific prot...    28   7.4  
AB018272-1|BAA34449.1| 1196|Homo sapiens KIAA0729 protein protein.     28   7.4  
AB011142-1|BAA25496.2| 3412|Homo sapiens KIAA0570 protein protein.     28   7.4  

>BC022783-1|AAH22783.1|  986|Homo sapiens USP34 protein protein.
          Length = 986

 Score = 28.3 bits (60), Expect = 7.4
 Identities = 13/34 (38%), Positives = 17/34 (50%)
 Frame = -2

Query: 324 PPRVFLYLCLKPDATEKTTGKRHKYKKMRQKYTY 223
           PPR  L +CL P   E + GK   Y +M   Y +
Sbjct: 550 PPRPELNMCLLPTMVETSKGKDDVYDRMLLDYFF 583


>AJ586138-1|CAE51938.1| 3395|Homo sapiens ubiquitin-specific
            proteinase 34 protein.
          Length = 3395

 Score = 28.3 bits (60), Expect = 7.4
 Identities = 13/34 (38%), Positives = 17/34 (50%)
 Frame = -2

Query: 324  PPRVFLYLCLKPDATEKTTGKRHKYKKMRQKYTY 223
            PPR  L +CL P   E + GK   Y +M   Y +
Sbjct: 2959 PPRPELNMCLLPTMVETSKGKDDVYDRMLLDYFF 2992


>AB018272-1|BAA34449.1| 1196|Homo sapiens KIAA0729 protein protein.
          Length = 1196

 Score = 28.3 bits (60), Expect = 7.4
 Identities = 13/34 (38%), Positives = 17/34 (50%)
 Frame = -2

Query: 324 PPRVFLYLCLKPDATEKTTGKRHKYKKMRQKYTY 223
           PPR  L +CL P   E + GK   Y +M   Y +
Sbjct: 760 PPRPELNMCLLPTMVETSKGKDDVYDRMLLDYFF 793


>AB011142-1|BAA25496.2| 3412|Homo sapiens KIAA0570 protein protein.
          Length = 3412

 Score = 28.3 bits (60), Expect = 7.4
 Identities = 13/34 (38%), Positives = 17/34 (50%)
 Frame = -2

Query: 324  PPRVFLYLCLKPDATEKTTGKRHKYKKMRQKYTY 223
            PPR  L +CL P   E + GK   Y +M   Y +
Sbjct: 2976 PPRPELNMCLLPTMVETSKGKDDVYDRMLLDYFF 3009


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 49,560,073
Number of Sequences: 237096
Number of extensions: 797982
Number of successful extensions: 1486
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1474
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1486
length of database: 76,859,062
effective HSP length: 81
effective length of database: 57,654,286
effective search space used: 2133208582
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)