Bombyx BLAST Result against spombe

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-6007
         (515 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPAC644.06c |cdr1|nim1|GIN4 family protein kinase Cdr1|Schizosac...    41   1e-04
SPBC4F6.06 |kin1||microtubule affinity-regulating kinase Kin1 |S...    38   7e-04
SPAC110.01 |ppk1|SPAC140.05|serine/threonine protein kinase Ppk1...    38   0.001
SPCC1322.08 |srk1|mkp1|MAPK-activated protein kinase Srk1|Schizo...    37   0.002
SPAC9G1.02 |wis4|wak1, wik1|MAP kinase kinase kinase Wis4|Schizo...    37   0.002
SPBC1D7.05 |byr2|ste8, SPBC2F12.01|MAP kinase kinase kinase Byr2...    37   0.002
SPAC57A10.02 |cdr2||GIN4 family protein kinase Cdr2|Schizosaccha...    36   0.005
SPCC74.03c |ssp2|ucp9|serine/threonine protein kinase Ssp2|Schiz...    35   0.006
SPBC32C12.03c |ppk25||serine/threonine protein kinase Ppk25 |Sch...    34   0.011
SPCC320.13c |ark1|aim1, SPCC330.16|aurora-B kinase Ark1|Schizosa...    34   0.015
SPACUNK12.02c |cmk1||calcium/calmodulin-dependent protein kinase...    32   0.044
SPCC1259.13 |chk1|rad27|Chk1 protein kinase|Schizosaccharomyces ...    32   0.044
SPCC4G3.08 |psk1||serine/threonine protein kinase Psk1|Schizosac...    32   0.044
SPCC18B5.11c |cds1||replication checkpoint kinase Cds1|Schizosac...    32   0.059
SPAC23A1.06c |cmk2|mkp2|MAPK-activated protein kinase Cmk2|Schiz...    29   0.31 
SPAC890.03 |ppk16|mug92|serine/threonine protein kinase Ppk16 |S...    29   0.41 
SPBC106.10 |pka1|tpk, git6|cAMP-dependent protein kinase catalyt...    29   0.55 
SPAC1006.09 |win1|SPAC1250.06c, SPAPJ730.01|MAP kinase kinase ki...    28   0.72 
SPAC14C4.03 |mek1||Cds1/Rad53/Chk2 family protein kinase Mek1 |S...    28   0.95 
SPBC19C2.05 |ran1|pat1|serine/threonine protein kinase Ran1|Schi...    27   2.2  
SPBC685.09 |orc2|orp2|origin recognition complex subunit Orc2|Sc...    26   3.8  

>SPAC644.06c |cdr1|nim1|GIN4 family protein kinase
           Cdr1|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 593

 Score = 41.1 bits (92), Expect = 1e-04
 Identities = 20/42 (47%), Positives = 24/42 (57%)
 Frame = +1

Query: 37  EAALQRALRHPHVLRCLGERTHLQHHYVFLEYAQGGELFDRI 162
           E  + R LRHP++LR     T  QH Y+ LEY   GELF  I
Sbjct: 53  EILMMRLLRHPNILRLYDVWTDHQHMYLALEYVPDGELFHYI 94


>SPBC4F6.06 |kin1||microtubule affinity-regulating kinase Kin1
           |Schizosaccharomyces pombe|chr 2|||Manual
          Length = 891

 Score = 38.3 bits (85), Expect = 7e-04
 Identities = 21/59 (35%), Positives = 28/59 (47%), Gaps = 5/59 (8%)
 Frame = +1

Query: 1   AVKAAQGSGG-----AREAALQRALRHPHVLRCLGERTHLQHHYVFLEYAQGGELFDRI 162
           A KAAQ          REAAL   LRHP++           H+Y+  E+  GG++ D I
Sbjct: 174 ATKAAQSEKNKEIRTVREAALSTLLRHPYICEARDVYITNSHYYMVFEFVDGGQMLDYI 232


>SPAC110.01 |ppk1|SPAC140.05|serine/threonine protein kinase Ppk1
           |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 1023

 Score = 37.5 bits (83), Expect = 0.001
 Identities = 19/46 (41%), Positives = 29/46 (63%), Gaps = 3/46 (6%)
 Frame = +1

Query: 34  REAALQRAL--RHPHVLRCLGERTHLQHHY-VFLEYAQGGELFDRI 162
           RE A+ + L   HPH+++ L +    +HH+ + L+Y  GGELFD I
Sbjct: 545 REVAILKGLGNNHPHIVKYL-DFVKTKHHFGIVLDYVNGGELFDYI 589


>SPCC1322.08 |srk1|mkp1|MAPK-activated protein kinase
           Srk1|Schizosaccharomyces pombe|chr 3|||Manual
          Length = 580

 Score = 37.1 bits (82), Expect = 0.002
 Identities = 15/43 (34%), Positives = 28/43 (65%)
 Frame = +1

Query: 34  REAALQRALRHPHVLRCLGERTHLQHHYVFLEYAQGGELFDRI 162
           +E  + R ++HP++++ L      +++Y+ LE A GGELF +I
Sbjct: 180 KEVQIMRRVKHPNIIQLLEFIQTPEYYYLVLELADGGELFHQI 222


>SPAC9G1.02 |wis4|wak1, wik1|MAP kinase kinase kinase
            Wis4|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 1401

 Score = 37.1 bits (82), Expect = 0.002
 Identities = 15/40 (37%), Positives = 22/40 (55%)
 Frame = +1

Query: 37   EAALQRALRHPHVLRCLGERTHLQHHYVFLEYAQGGELFD 156
            E  +   L HP+V+   G   H +  Y+F+E+ QGG L D
Sbjct: 1086 EMTVLERLNHPNVVTYYGVEVHREKVYIFMEFCQGGSLAD 1125


>SPBC1D7.05 |byr2|ste8, SPBC2F12.01|MAP kinase kinase kinase
           Byr2|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 659

 Score = 36.7 bits (81), Expect = 0.002
 Identities = 16/40 (40%), Positives = 23/40 (57%)
 Frame = +1

Query: 31  AREAALQRALRHPHVLRCLGERTHLQHHYVFLEYAQGGEL 150
           A E AL + L H H+++ LG   +  H  +FLEY  GG +
Sbjct: 445 AGEIALLQELSHEHIVQYLGSNLNSDHLNIFLEYVPGGSV 484


>SPAC57A10.02 |cdr2||GIN4 family protein kinase
           Cdr2|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 775

 Score = 35.5 bits (78), Expect = 0.005
 Identities = 16/40 (40%), Positives = 24/40 (60%)
 Frame = +1

Query: 37  EAALQRALRHPHVLRCLGERTHLQHHYVFLEYAQGGELFD 156
           E  L R + HP+VL+ +   +  +  +V +EY  GGELFD
Sbjct: 58  ELVLLRLIEHPNVLQLIDVISAQEQLFVVVEYMPGGELFD 97


>SPCC74.03c |ssp2|ucp9|serine/threonine protein kinase
           Ssp2|Schizosaccharomyces pombe|chr 3|||Manual
          Length = 576

 Score = 35.1 bits (77), Expect = 0.006
 Identities = 19/45 (42%), Positives = 26/45 (57%)
 Frame = +1

Query: 34  REAALQRALRHPHVLRCLGERTHLQHHYVFLEYAQGGELFDRIGE 168
           RE +  + LRHPH+++     T      + +EYA GGELFD I E
Sbjct: 81  REISYLKLLRHPHIIKLYDVITTPTDIVMVIEYA-GGELFDYIVE 124


>SPBC32C12.03c |ppk25||serine/threonine protein kinase Ppk25
           |Schizosaccharomyces pombe|chr 2|||Manual
          Length = 423

 Score = 34.3 bits (75), Expect = 0.011
 Identities = 17/43 (39%), Positives = 23/43 (53%)
 Frame = +1

Query: 34  REAALQRALRHPHVLRCLGERTHLQHHYVFLEYAQGGELFDRI 162
           REA L R LRHP++ R +         Y+  EY  GG+L + I
Sbjct: 99  REALLGRLLRHPNICRVIDCIRTPACTYILFEYVPGGQLLEYI 141


>SPCC320.13c |ark1|aim1, SPCC330.16|aurora-B kinase
           Ark1|Schizosaccharomyces pombe|chr 3|||Manual
          Length = 355

 Score = 33.9 bits (74), Expect = 0.015
 Identities = 16/43 (37%), Positives = 24/43 (55%)
 Frame = +1

Query: 34  REAALQRALRHPHVLRCLGERTHLQHHYVFLEYAQGGELFDRI 162
           RE  +Q  LRH ++LR  G     +  Y+ LE+A  GEL+  +
Sbjct: 136 REIEIQSNLRHKNILRLYGHFHDEKRIYLILEFAGRGELYQHL 178


>SPACUNK12.02c |cmk1||calcium/calmodulin-dependent protein kinase
           Cmk1|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 335

 Score = 32.3 bits (70), Expect = 0.044
 Identities = 17/42 (40%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
 Frame = +1

Query: 40  AALQR-ALRHPHVLRCLGERTHLQHHYVFLEYAQGGELFDRI 162
           A L+R +  HP++L  +     + + Y+  E A GGELFDRI
Sbjct: 79  AILKRVSYEHPNILHLVDFFETVNNLYLITELATGGELFDRI 120


>SPCC1259.13 |chk1|rad27|Chk1 protein kinase|Schizosaccharomyces
           pombe|chr 3|||Manual
          Length = 496

 Score = 32.3 bits (70), Expect = 0.044
 Identities = 13/33 (39%), Positives = 21/33 (63%)
 Frame = +1

Query: 64  HPHVLRCLGERTHLQHHYVFLEYAQGGELFDRI 162
           H +++       + Q  +V LE+AQGG+LFD+I
Sbjct: 71  HKNIIHFYNTAENPQWRWVVLEFAQGGDLFDKI 103


>SPCC4G3.08 |psk1||serine/threonine protein kinase
           Psk1|Schizosaccharomyces pombe|chr 3|||Manual
          Length = 436

 Score = 32.3 bits (70), Expect = 0.044
 Identities = 15/44 (34%), Positives = 21/44 (47%)
 Frame = +1

Query: 37  EAALQRALRHPHVLRCLGERTHLQHHYVFLEYAQGGELFDRIGE 168
           E  +   +RHP + R           Y+ L+YA GGELF  + E
Sbjct: 140 ERQILEEVRHPFICRLYYAFQDHDRLYLILQYAPGGELFSHLAE 183


>SPCC18B5.11c |cds1||replication checkpoint kinase
           Cds1|Schizosaccharomyces pombe|chr 3|||Manual
          Length = 460

 Score = 31.9 bits (69), Expect = 0.059
 Identities = 13/41 (31%), Positives = 24/41 (58%)
 Frame = +1

Query: 34  REAALQRALRHPHVLRCLGERTHLQHHYVFLEYAQGGELFD 156
           RE  + ++L HP V++C     +    ++ +EY +GG+L D
Sbjct: 218 REIDILKSLHHPGVVQCHEIFENDDELFIVMEYVEGGDLMD 258


>SPAC23A1.06c |cmk2|mkp2|MAPK-activated protein kinase
           Cmk2|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 504

 Score = 29.5 bits (63), Expect = 0.31
 Identities = 14/49 (28%), Positives = 26/49 (53%)
 Frame = +1

Query: 16  QGSGGAREAALQRALRHPHVLRCLGERTHLQHHYVFLEYAQGGELFDRI 162
           Q  G  +E  + R ++H +V+           +++ +E A+GGELF +I
Sbjct: 105 QRQGVFKEVNIMRRVKHKNVVNLFDFVETEDFYHLVMELAEGGELFHQI 153


>SPAC890.03 |ppk16|mug92|serine/threonine protein kinase Ppk16
           |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 672

 Score = 29.1 bits (62), Expect = 0.41
 Identities = 15/42 (35%), Positives = 20/42 (47%)
 Frame = +1

Query: 31  AREAALQRALRHPHVLRCLGERTHLQHHYVFLEYAQGGELFD 156
           ARE    R L HP++ R           Y+ +EY   GEL+D
Sbjct: 71  AREIHHHRRLLHPNITRLYEVVCTEDRIYLAMEYCPNGELYD 112


>SPBC106.10 |pka1|tpk, git6|cAMP-dependent protein kinase catalytic
           subunit Pka1 |Schizosaccharomyces pombe|chr 2|||Manual
          Length = 512

 Score = 28.7 bits (61), Expect = 0.55
 Identities = 10/38 (26%), Positives = 23/38 (60%)
 Frame = +1

Query: 58  LRHPHVLRCLGERTHLQHHYVFLEYAQGGELFDRIGEC 171
           ++HP +    G     ++ ++ +++A+GGELF  + +C
Sbjct: 256 VQHPFITILWGTFQDAKNLFMVMDFAEGGELFSLLRKC 293


>SPAC1006.09 |win1|SPAC1250.06c, SPAPJ730.01|MAP kinase kinase kinase
            Win1|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 1436

 Score = 28.3 bits (60), Expect = 0.72
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = +1

Query: 64   HPHVLRCLGERTHLQHHYVFLEYAQGGELFD 156
            HP+V+   G   H +   +F+E  QG  LF+
Sbjct: 1178 HPNVVSYYGIEVHREKVNIFMELCQGSSLFE 1208


>SPAC14C4.03 |mek1||Cds1/Rad53/Chk2 family protein kinase Mek1
           |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 445

 Score = 27.9 bits (59), Expect = 0.95
 Identities = 12/39 (30%), Positives = 20/39 (51%)
 Frame = +1

Query: 37  EAALQRALRHPHVLRCLGERTHLQHHYVFLEYAQGGELF 153
           E  + R L HP++++   E       ++F E   GG+LF
Sbjct: 206 EMTILRKLDHPNIIKVNMEYNSETQFFIFEEMVTGGDLF 244


>SPBC19C2.05 |ran1|pat1|serine/threonine protein kinase
           Ran1|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 470

 Score = 26.6 bits (56), Expect = 2.2
 Identities = 17/47 (36%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
 Frame = +1

Query: 31  AREAALQ-RALRHPHVLRCLGERTHLQHHYVFLEYAQGGELFDRIGE 168
           ARE AL  R   HP+++            YV L+Y   G+LF  I E
Sbjct: 63  ARELALHARVSSHPYIITLHRVLETEDAIYVVLQYCPNGDLFTYITE 109


>SPBC685.09 |orc2|orp2|origin recognition complex subunit
           Orc2|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 535

 Score = 25.8 bits (54), Expect = 3.8
 Identities = 11/35 (31%), Positives = 18/35 (51%)
 Frame = +3

Query: 381 FNKRHFHGTFFEIQLKKG*LFFGVGFNITFYNHYI 485
           F  R+FH  +FE+      LF+G G    F + ++
Sbjct: 242 FQSRNFHQWYFELVNNFNLLFYGFGSKEHFLSSFV 276


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,652,475
Number of Sequences: 5004
Number of extensions: 27279
Number of successful extensions: 70
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 69
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 69
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 208287218
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)