Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-6006
         (715 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT011035-1|AAR30195.1|  760|Drosophila melanogaster RE44586p pro...    30   2.7  
AE013599-588|AAF59136.1|  760|Drosophila melanogaster CG11210-PA...    30   2.7  

>BT011035-1|AAR30195.1|  760|Drosophila melanogaster RE44586p
           protein.
          Length = 760

 Score = 30.3 bits (65), Expect = 2.7
 Identities = 18/45 (40%), Positives = 27/45 (60%)
 Frame = +3

Query: 399 VLSDLHSNPLYCQKGKFKSKVF*TKSNGISPYNIIENMLFYVLFV 533
           V+S+ +SN  YCQ    ++  F T  NGI P  +I N +F+VL +
Sbjct: 2   VMSE-NSNISYCQAVANRTSFFTTAYNGI-PETLILNTIFWVLLI 44


>AE013599-588|AAF59136.1|  760|Drosophila melanogaster CG11210-PA
           protein.
          Length = 760

 Score = 30.3 bits (65), Expect = 2.7
 Identities = 18/45 (40%), Positives = 27/45 (60%)
 Frame = +3

Query: 399 VLSDLHSNPLYCQKGKFKSKVF*TKSNGISPYNIIENMLFYVLFV 533
           V+S+ +SN  YCQ    ++  F T  NGI P  +I N +F+VL +
Sbjct: 2   VMSE-NSNISYCQAVANRTSFFTTAYNGI-PETLILNTIFWVLLI 44


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,973,171
Number of Sequences: 53049
Number of extensions: 605041
Number of successful extensions: 1039
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1008
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1039
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3170136354
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)