Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-6000
         (737 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014134-2052|AAN10775.1|  416|Drosophila melanogaster CG32830-P...    30   2.9  
Y17570-1|CAA76791.1|  558|Drosophila melanogaster pentaxin-like ...    29   8.7  
AY113394-1|AAM29399.1|  558|Drosophila melanogaster RE07885p pro...    29   8.7  
AL031025-1|CAA19835.2|  558|Drosophila melanogaster EG:9D2.1,FBg...    29   8.7  
AE014298-246|AAF45658.1|  558|Drosophila melanogaster CG3100-PA ...    29   8.7  

>AE014134-2052|AAN10775.1|  416|Drosophila melanogaster CG32830-PA
           protein.
          Length = 416

 Score = 30.3 bits (65), Expect = 2.9
 Identities = 20/53 (37%), Positives = 26/53 (49%), Gaps = 4/53 (7%)
 Frame = +1

Query: 496 RQSNQLLHQRPSRHQPQH---PCRHLHLTLN-LAINTTNHNTD*SCLINNTVT 642
           +Q  QL  QR S HQP H   P  H H   +   IN  N+NT  +   N++ T
Sbjct: 98  QQQRQLFDQRRSHHQPHHHHQPHHHRHHHHHQQRINNNNNNTKKNRSANSSPT 150


>Y17570-1|CAA76791.1|  558|Drosophila melanogaster pentaxin-like
           protein protein.
          Length = 558

 Score = 28.7 bits (61), Expect = 8.7
 Identities = 12/35 (34%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
 Frame = -1

Query: 554 HGCWGWC-REGRWCRSWLDCRHEGRGYNHSVVSER 453
           H C  W  + G W ++WL     GRG+++S+V  +
Sbjct: 224 HMCSSWNGKTGEW-QAWLKAERIGRGFHNSLVGHK 257


>AY113394-1|AAM29399.1|  558|Drosophila melanogaster RE07885p
           protein.
          Length = 558

 Score = 28.7 bits (61), Expect = 8.7
 Identities = 12/35 (34%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
 Frame = -1

Query: 554 HGCWGWC-REGRWCRSWLDCRHEGRGYNHSVVSER 453
           H C  W  + G W ++WL     GRG+++S+V  +
Sbjct: 224 HMCSSWNGKTGEW-QAWLKAERIGRGFHNSLVGHK 257


>AL031025-1|CAA19835.2|  558|Drosophila melanogaster
           EG:9D2.1,FBgn0024897;b6 protein.
          Length = 558

 Score = 28.7 bits (61), Expect = 8.7
 Identities = 12/35 (34%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
 Frame = -1

Query: 554 HGCWGWC-REGRWCRSWLDCRHEGRGYNHSVVSER 453
           H C  W  + G W ++WL     GRG+++S+V  +
Sbjct: 224 HMCSSWNGKTGEW-QAWLKAERIGRGFHNSLVGHK 257


>AE014298-246|AAF45658.1|  558|Drosophila melanogaster CG3100-PA
           protein.
          Length = 558

 Score = 28.7 bits (61), Expect = 8.7
 Identities = 12/35 (34%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
 Frame = -1

Query: 554 HGCWGWC-REGRWCRSWLDCRHEGRGYNHSVVSER 453
           H C  W  + G W ++WL     GRG+++S+V  +
Sbjct: 224 HMCSSWNGKTGEW-QAWLKAERIGRGFHNSLVGHK 257


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,886,797
Number of Sequences: 53049
Number of extensions: 644959
Number of successful extensions: 2600
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2381
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2591
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3334818762
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)