Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-6000
         (737 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly pro...    25   0.56 
DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    25   0.98 
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    25   0.98 
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    25   0.98 
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      24   1.7  
AF274024-1|AAF90150.1|  232|Apis mellifera tetraspanin F139 prot...    24   1.7  
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          23   2.3  
EF051030-1|ABN05618.1|  118|Apis mellifera phosphoenolpyruvate c...    22   5.2  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    22   5.2  
DQ855483-1|ABH88170.1|  117|Apis mellifera chemosensory protein ...    22   6.9  
AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    22   6.9  
AJ973398-1|CAJ01445.1|  117|Apis mellifera hypothetical protein ...    22   6.9  
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    22   6.9  
AB208106-1|BAE72138.1|  111|Apis mellifera Broad complex zinc fi...    22   6.9  
AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...    21   9.1  

>AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly
           protein MRJP2 protein.
          Length = 452

 Score = 25.4 bits (53), Expect = 0.56
 Identities = 9/33 (27%), Positives = 18/33 (54%)
 Frame = +3

Query: 60  GYNLQRDAPHNIGPNDPYKFDYTNLGQEQSQRL 158
           G  ++ + PH +G N P K +Y  +   + Q++
Sbjct: 354 GMKIKEELPHFVGSNKPVKDEYMLVLSNRMQKI 386


>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 24.6 bits (51), Expect = 0.98
 Identities = 11/36 (30%), Positives = 16/36 (44%)
 Frame = +2

Query: 350 AILSNATVLSDAAVLPASAAWTVWAEVRSVGS*CSV 457
           A ++   +LS A   P  A W  W E    G+ C +
Sbjct: 155 ATIAGVWILSGAISSPPLAGWNDWPEELEPGTPCQL 190


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 24.6 bits (51), Expect = 0.98
 Identities = 11/36 (30%), Positives = 16/36 (44%)
 Frame = +2

Query: 350 AILSNATVLSDAAVLPASAAWTVWAEVRSVGS*CSV 457
           A ++   +LS A   P  A W  W E    G+ C +
Sbjct: 155 ATIAGVWILSGAISSPPLAGWNDWPEELEPGTPCQL 190


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 24.6 bits (51), Expect = 0.98
 Identities = 11/36 (30%), Positives = 16/36 (44%)
 Frame = +2

Query: 350 AILSNATVLSDAAVLPASAAWTVWAEVRSVGS*CSV 457
           A ++   +LS A   P  A W  W E    G+ C +
Sbjct: 155 ATIAGVWILSGAISSPPLAGWNDWPEELEPGTPCQL 190


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 23.8 bits (49), Expect = 1.7
 Identities = 12/30 (40%), Positives = 15/30 (50%)
 Frame = -1

Query: 503 DCRHEGRGYNHSVVSERYITTRRSEPLPKL 414
           D R E   Y+H ++  RY   R S  LP L
Sbjct: 253 DYRGEEYLYSHKLLLNRYYLERLSNDLPHL 282


>AF274024-1|AAF90150.1|  232|Apis mellifera tetraspanin F139
           protein.
          Length = 232

 Score = 23.8 bits (49), Expect = 1.7
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = +1

Query: 142 SNLNDCSGAIKDLIKSAGLDYGLI 213
           S  N C  A+KD +K AG  +G +
Sbjct: 177 SYTNGCVEALKDTVKLAGTVFGSV 200


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 23.4 bits (48), Expect = 2.3
 Identities = 12/30 (40%), Positives = 15/30 (50%)
 Frame = -1

Query: 503 DCRHEGRGYNHSVVSERYITTRRSEPLPKL 414
           D R E   Y+H ++  RY   R S  LP L
Sbjct: 253 DYRGEEYLYSHKLLLNRYYLERLSNDLPYL 282


>EF051030-1|ABN05618.1|  118|Apis mellifera phosphoenolpyruvate
           carboxykinase protein.
          Length = 118

 Score = 22.2 bits (45), Expect = 5.2
 Identities = 17/46 (36%), Positives = 21/46 (45%)
 Frame = +2

Query: 488 LRAGNPTSSCTSALPGTSPSTRAVTFT*PSTWLSIQQTTIQIRVAS 625
           LRA NP        PGTS +T       P+   +I + TI   VAS
Sbjct: 57  LRAINPEYGFFGVAPGTSSATN------PNAMKTIFKNTIFTNVAS 96


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
            protein.
          Length = 1770

 Score = 22.2 bits (45), Expect = 5.2
 Identities = 9/19 (47%), Positives = 10/19 (52%)
 Frame = +1

Query: 550  PCRHLHLTLNLAINTTNHN 606
            PC H  +T    IN  NHN
Sbjct: 1465 PCWHAVMTTYPRINPDNHN 1483


>DQ855483-1|ABH88170.1|  117|Apis mellifera chemosensory protein 2
           protein.
          Length = 117

 Score = 21.8 bits (44), Expect = 6.9
 Identities = 9/29 (31%), Positives = 13/29 (44%)
 Frame = -3

Query: 165 PRTIVEIAPVLSSCNRTYMDHWGRYCAEH 79
           P    +I  VLS   RTY   W +   ++
Sbjct: 85  PEETRQIKKVLSHIQRTYPKEWSKIVQQY 113


>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 21.8 bits (44), Expect = 6.9
 Identities = 7/24 (29%), Positives = 14/24 (58%)
 Frame = -2

Query: 313 PYTLDKSYWFGTPYLVGNSMRPNI 242
           PYT+D + +    + + +S  PN+
Sbjct: 563 PYTVDAAIYGNISHFINHSCDPNL 586


>AJ973398-1|CAJ01445.1|  117|Apis mellifera hypothetical protein
           protein.
          Length = 117

 Score = 21.8 bits (44), Expect = 6.9
 Identities = 9/29 (31%), Positives = 13/29 (44%)
 Frame = -3

Query: 165 PRTIVEIAPVLSSCNRTYMDHWGRYCAEH 79
           P    +I  VLS   RTY   W +   ++
Sbjct: 85  PEETRQIKKVLSHIQRTYPKEWSKIVQQY 113


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 21.8 bits (44), Expect = 6.9
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = +2

Query: 356 LSNATVLSDAAVLPASAAWTVW 421
           L+ A ++   AVLP SA W V+
Sbjct: 107 LAVADLMVGLAVLPFSATWEVF 128


>AB208106-1|BAE72138.1|  111|Apis mellifera Broad complex zinc
           finger domain-Z1 isoform protein.
          Length = 111

 Score = 21.8 bits (44), Expect = 6.9
 Identities = 9/28 (32%), Positives = 17/28 (60%)
 Frame = +1

Query: 496 RQSNQLLHQRPSRHQPQHPCRHLHLTLN 579
           R+  Q +H RPS+    + C+ ++ +LN
Sbjct: 19  RRHIQNVHTRPSKEPICNICKRVYSSLN 46


>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
           kinase foraging protein.
          Length = 678

 Score = 21.4 bits (43), Expect = 9.1
 Identities = 10/36 (27%), Positives = 15/36 (41%)
 Frame = +2

Query: 173 RI*SSRRVWTMVSFNEQVSVLTNYVRAHGITNQIWS 280
           R+   R+ WT     E V+      + H I+   WS
Sbjct: 515 RLDHGRKTWTFCGTPEYVAPEVILNKGHDISADYWS 550


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 200,583
Number of Sequences: 438
Number of extensions: 4266
Number of successful extensions: 18
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23023035
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)