Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-5994
         (712 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    22   5.7  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      21   9.9  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      21   9.9  
AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esteras...    21   9.9  
AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esteras...    21   9.9  
AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esteras...    21   9.9  

>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory receptor
           candidate 5 protein.
          Length = 522

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = +2

Query: 140 VQLCLRFLLTQLTPLTVATSL 202
           VQ CL FLL  L   T+ T++
Sbjct: 66  VQTCLDFLLLALNISTILTTV 86


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = -1

Query: 127 LPQQEPR*RGCKPREQL 77
           L QQ    + C+PREQL
Sbjct: 580 LDQQNQWCKPCRPREQL 596


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = -1

Query: 127 LPQQEPR*RGCKPREQL 77
           L QQ    + C+PREQL
Sbjct: 472 LDQQNQWCKPCRPREQL 488


>AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 7/13 (53%), Positives = 8/13 (61%)
 Frame = -1

Query: 469 RSMRRWLEHREQS 431
           RSM  W EH  +S
Sbjct: 424 RSMNSWFEHETES 436


>AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 7/13 (53%), Positives = 8/13 (61%)
 Frame = -1

Query: 469 RSMRRWLEHREQS 431
           RSM  W EH  +S
Sbjct: 424 RSMNSWFEHETES 436


>AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 7/13 (53%), Positives = 8/13 (61%)
 Frame = -1

Query: 469 RSMRRWLEHREQS 431
           RSM  W EH  +S
Sbjct: 424 RSMNSWFEHETES 436


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 112,114
Number of Sequences: 336
Number of extensions: 1993
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18843005
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)