Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-5991
         (728 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY052138-1|AAK93562.1| 1071|Drosophila melanogaster SD09502p pro...    30   2.8  
AE014296-2453|AAF49684.2| 1071|Drosophila melanogaster CG5392-PA...    30   2.8  
AY047530-1|AAK77262.1|  784|Drosophila melanogaster GH03554p pro...    29   6.5  
AE014297-2286|AAF55372.1|  784|Drosophila melanogaster CG16941-P...    29   6.5  
AE013599-3889|AAF47218.2| 1556|Drosophila melanogaster CG13582-P...    29   6.5  

>AY052138-1|AAK93562.1| 1071|Drosophila melanogaster SD09502p
           protein.
          Length = 1071

 Score = 30.3 bits (65), Expect = 2.8
 Identities = 12/30 (40%), Positives = 16/30 (53%)
 Frame = +2

Query: 146 PTHLSFDCRQRYSMSVACKHQCKRLWLQLF 235
           P HL  D  +R     A  H+C+RL  Q+F
Sbjct: 373 PNHLGMDAAKRQCCEQASSHKCRRLCNQIF 402


>AE014296-2453|AAF49684.2| 1071|Drosophila melanogaster CG5392-PA
           protein.
          Length = 1071

 Score = 30.3 bits (65), Expect = 2.8
 Identities = 12/30 (40%), Positives = 16/30 (53%)
 Frame = +2

Query: 146 PTHLSFDCRQRYSMSVACKHQCKRLWLQLF 235
           P HL  D  +R     A  H+C+RL  Q+F
Sbjct: 373 PNHLGMDAAKRQCCEQASSHKCRRLCNQIF 402


>AY047530-1|AAK77262.1|  784|Drosophila melanogaster GH03554p
           protein.
          Length = 784

 Score = 29.1 bits (62), Expect = 6.5
 Identities = 14/41 (34%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
 Frame = +3

Query: 447 VSLPP-PTAHDDHDHSAESETIEQEKESGQHHGLSDVRIHH 566
           +S PP P+    H HS++S+    +   G HHG  +   HH
Sbjct: 564 LSAPPQPSTKSQHSHSSQSQ--HHQGGGGGHHGHHNPHHHH 602


>AE014297-2286|AAF55372.1|  784|Drosophila melanogaster CG16941-PA
           protein.
          Length = 784

 Score = 29.1 bits (62), Expect = 6.5
 Identities = 14/41 (34%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
 Frame = +3

Query: 447 VSLPP-PTAHDDHDHSAESETIEQEKESGQHHGLSDVRIHH 566
           +S PP P+    H HS++S+    +   G HHG  +   HH
Sbjct: 564 LSAPPQPSTKSQHSHSSQSQ--HHQGGGGGHHGHHNPHHHH 602


>AE013599-3889|AAF47218.2| 1556|Drosophila melanogaster CG13582-PA
           protein.
          Length = 1556

 Score = 29.1 bits (62), Expect = 6.5
 Identities = 20/75 (26%), Positives = 34/75 (45%)
 Frame = +1

Query: 202 ASMQAIVASTVSFRIQSGFQPS*LMDLFYLTIGKSAVTLLNLITYILMDTCRLLIYFGSL 381
           ++ Q +     S+ +    +PS     F++ +G   VT + L+  IL+ T         +
Sbjct: 262 STSQNVPLEVSSWFLMLPMEPSLSRAQFFIMLGFEKVTPVLLLLTILLSTAH------RI 315

Query: 382 NLGLYASWRCRVWRD 426
            +GL  SWRC V  D
Sbjct: 316 EMGLRPSWRCYVLGD 330


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,117,000
Number of Sequences: 53049
Number of extensions: 735421
Number of successful extensions: 2588
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2307
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2580
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3273062859
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)