Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-5988
(748 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC052577-1|AAH52577.1| 963|Homo sapiens phosphofurin acidic clu... 116 1e-25
BC010096-1|AAH10096.1| 963|Homo sapiens phosphofurin acidic clu... 116 1e-25
AY320283-1|AAQ67682.1| 963|Homo sapiens endosome-TGN sorting co... 116 1e-25
BC065220-1|AAH65220.2| 889|Homo sapiens phosphofurin acidic clu... 115 2e-25
BC050351-1|AAH50351.2| 889|Homo sapiens phosphofurin acidic clu... 115 2e-25
AY320284-1|AAQ83882.2| 889|Homo sapiens PACS2 protein. 115 2e-25
AB011174-1|BAA25528.1| 962|Homo sapiens KIAA0602 protein protein. 115 2e-25
BC131591-1|AAI31592.1| 890|Homo sapiens PACS2 protein protein. 105 2e-22
AK056361-1|BAB71164.1| 750|Homo sapiens protein ( Homo sapiens ... 105 2e-22
AK096644-1|BAC04831.1| 829|Homo sapiens protein ( Homo sapiens ... 37 0.088
BC150203-1|AAI50204.1| 816|Homo sapiens two pore segment channe... 31 5.8
AY083666-1|AAM01199.1| 816|Homo sapiens two-pore channel 1 prot... 31 5.8
AB032995-1|BAA86483.2| 857|Homo sapiens KIAA1169 protein protein. 31 5.8
Z99757-1|CAB75612.1| 520|Homo sapiens c394H11.1 (similar to SOX... 30 7.7
>BC052577-1|AAH52577.1| 963|Homo sapiens phosphofurin acidic
cluster sorting protein 1 protein.
Length = 963
Score = 116 bits (278), Expect = 1e-25
Identities = 63/133 (47%), Positives = 78/133 (58%), Gaps = 3/133 (2%)
Frame = +2
Query: 212 PVPMKLFAAWEVDRTPSNCIPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRMH 391
PV M L+A WEVDR+ S+C+P ++
Sbjct: 98 PVQMNLYATWEVDRSSSSCVPRLFSLTLKKLVMLKEMDKDLNSVVIAV---------KLQ 148
Query: 392 SSKRTLRSNDITIPP---MDVELDLCFSLQYPHFVKRDGNRLQIMLQRRKKYKNRTILGY 562
SKR LRSN+I +P ++ EL L FSLQYPHF+KRD N+LQIMLQRRK+YKNRTILGY
Sbjct: 149 GSKRILRSNEIVLPASGLVETELQLTFSLQYPHFLKRDANKLQIMLQRRKRYKNRTILGY 208
Query: 563 KTLAEGVIRMDQV 601
KTLA G+I M +V
Sbjct: 209 KTLAVGLINMAEV 221
>BC010096-1|AAH10096.1| 963|Homo sapiens phosphofurin acidic
cluster sorting protein 1 protein.
Length = 963
Score = 116 bits (278), Expect = 1e-25
Identities = 63/133 (47%), Positives = 78/133 (58%), Gaps = 3/133 (2%)
Frame = +2
Query: 212 PVPMKLFAAWEVDRTPSNCIPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRMH 391
PV M L+A WEVDR+ S+C+P ++
Sbjct: 98 PVQMNLYATWEVDRSSSSCVPRLFSLTLKKLVMLKEMDKDLNSVVIAV---------KLQ 148
Query: 392 SSKRTLRSNDITIPP---MDVELDLCFSLQYPHFVKRDGNRLQIMLQRRKKYKNRTILGY 562
SKR LRSN+I +P ++ EL L FSLQYPHF+KRD N+LQIMLQRRK+YKNRTILGY
Sbjct: 149 GSKRILRSNEIVLPASGLVETELQLTFSLQYPHFLKRDANKLQIMLQRRKRYKNRTILGY 208
Query: 563 KTLAEGVIRMDQV 601
KTLA G+I M +V
Sbjct: 209 KTLAVGLINMAEV 221
>AY320283-1|AAQ67682.1| 963|Homo sapiens endosome-TGN sorting
connector protein.
Length = 963
Score = 116 bits (278), Expect = 1e-25
Identities = 63/133 (47%), Positives = 78/133 (58%), Gaps = 3/133 (2%)
Frame = +2
Query: 212 PVPMKLFAAWEVDRTPSNCIPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRMH 391
PV M L+A WEVDR+ S+C+P ++
Sbjct: 98 PVQMNLYATWEVDRSSSSCVPRLFSLTLKKLVMLKEMDKDLNSVVIAV---------KLQ 148
Query: 392 SSKRTLRSNDITIPP---MDVELDLCFSLQYPHFVKRDGNRLQIMLQRRKKYKNRTILGY 562
SKR LRSN+I +P ++ EL L FSLQYPHF+KRD N+LQIMLQRRK+YKNRTILGY
Sbjct: 149 GSKRILRSNEIVLPASGLVETELQLTFSLQYPHFLKRDANKLQIMLQRRKRYKNRTILGY 208
Query: 563 KTLAEGVIRMDQV 601
KTLA G+I M +V
Sbjct: 209 KTLAVGLINMAEV 221
>BC065220-1|AAH65220.2| 889|Homo sapiens phosphofurin acidic
cluster sorting protein 2 protein.
Length = 889
Score = 115 bits (277), Expect = 2e-25
Identities = 63/133 (47%), Positives = 78/133 (58%), Gaps = 3/133 (2%)
Frame = +2
Query: 212 PVPMKLFAAWEVDRTPSNCIPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRMH 391
PVPM LFA WEVD + +C+P +M
Sbjct: 19 PVPMNLFATWEVDGSSPSCVPRLCSLTLKKLVVFKELEKELISVVIAV---------KMQ 69
Query: 392 SSKRTLRSNDITIPP---MDVELDLCFSLQYPHFVKRDGNRLQIMLQRRKKYKNRTILGY 562
SKR LRS++I +PP ++ +L L FSLQYPHF+KR+GN+LQIMLQRRK+YKNRTILGY
Sbjct: 70 GSKRILRSHEIVLPPSGQVETDLALTFSLQYPHFLKREGNKLQIMLQRRKRYKNRTILGY 129
Query: 563 KTLAEGVIRMDQV 601
KTLA G I M +V
Sbjct: 130 KTLAAGSISMAEV 142
>BC050351-1|AAH50351.2| 889|Homo sapiens phosphofurin acidic
cluster sorting protein 2 protein.
Length = 889
Score = 115 bits (277), Expect = 2e-25
Identities = 63/133 (47%), Positives = 78/133 (58%), Gaps = 3/133 (2%)
Frame = +2
Query: 212 PVPMKLFAAWEVDRTPSNCIPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRMH 391
PVPM LFA WEVD + +C+P +M
Sbjct: 19 PVPMNLFATWEVDGSSPSCVPRLCSLTLKKLVVFKELEKELISVVIAV---------KMQ 69
Query: 392 SSKRTLRSNDITIPP---MDVELDLCFSLQYPHFVKRDGNRLQIMLQRRKKYKNRTILGY 562
SKR LRS++I +PP ++ +L L FSLQYPHF+KR+GN+LQIMLQRRK+YKNRTILGY
Sbjct: 70 GSKRILRSHEIVLPPSGQVETDLALTFSLQYPHFLKREGNKLQIMLQRRKRYKNRTILGY 129
Query: 563 KTLAEGVIRMDQV 601
KTLA G I M +V
Sbjct: 130 KTLAAGSISMAEV 142
>AY320284-1|AAQ83882.2| 889|Homo sapiens PACS2 protein.
Length = 889
Score = 115 bits (277), Expect = 2e-25
Identities = 63/133 (47%), Positives = 78/133 (58%), Gaps = 3/133 (2%)
Frame = +2
Query: 212 PVPMKLFAAWEVDRTPSNCIPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRMH 391
PVPM LFA WEVD + +C+P +M
Sbjct: 19 PVPMNLFATWEVDGSSPSCVPRLCSLTLKKLVVFKELEKELISVVIAV---------KMQ 69
Query: 392 SSKRTLRSNDITIPP---MDVELDLCFSLQYPHFVKRDGNRLQIMLQRRKKYKNRTILGY 562
SKR LRS++I +PP ++ +L L FSLQYPHF+KR+GN+LQIMLQRRK+YKNRTILGY
Sbjct: 70 GSKRILRSHEIVLPPSGQVETDLALTFSLQYPHFLKREGNKLQIMLQRRKRYKNRTILGY 129
Query: 563 KTLAEGVIRMDQV 601
KTLA G I M +V
Sbjct: 130 KTLAAGSISMAEV 142
>AB011174-1|BAA25528.1| 962|Homo sapiens KIAA0602 protein protein.
Length = 962
Score = 115 bits (277), Expect = 2e-25
Identities = 63/133 (47%), Positives = 78/133 (58%), Gaps = 3/133 (2%)
Frame = +2
Query: 212 PVPMKLFAAWEVDRTPSNCIPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRMH 391
PVPM LFA WEVD + +C+P +M
Sbjct: 77 PVPMNLFATWEVDGSSPSCVPRLCSLTLKKLVVFKELEKELISVVIAV---------KMQ 127
Query: 392 SSKRTLRSNDITIPP---MDVELDLCFSLQYPHFVKRDGNRLQIMLQRRKKYKNRTILGY 562
SKR LRS++I +PP ++ +L L FSLQYPHF+KR+GN+LQIMLQRRK+YKNRTILGY
Sbjct: 128 GSKRILRSHEIVLPPSGQVETDLALTFSLQYPHFLKREGNKLQIMLQRRKRYKNRTILGY 187
Query: 563 KTLAEGVIRMDQV 601
KTLA G I M +V
Sbjct: 188 KTLAAGSISMAEV 200
>BC131591-1|AAI31592.1| 890|Homo sapiens PACS2 protein protein.
Length = 890
Score = 105 bits (251), Expect = 2e-22
Identities = 50/76 (65%), Positives = 62/76 (81%), Gaps = 3/76 (3%)
Frame = +2
Query: 383 RMHSSKRTLRSNDITIPP---MDVELDLCFSLQYPHFVKRDGNRLQIMLQRRKKYKNRTI 553
+M SKR LRS++I +PP ++ +L L FSLQYPHF+KR+GN+LQIMLQRRK+YKNRTI
Sbjct: 76 KMQGSKRILRSHEIVLPPSGQVETDLALTFSLQYPHFLKREGNKLQIMLQRRKRYKNRTI 135
Query: 554 LGYKTLAEGVIRMDQV 601
LGYKTLA G I M +V
Sbjct: 136 LGYKTLAAGSISMAEV 151
>AK056361-1|BAB71164.1| 750|Homo sapiens protein ( Homo sapiens
cDNA FLJ31799 fis, clone NT2RI2009037, highly similar to
Rattus norvegicus cytosolic sorting protein PACS-1a
(PACS-1) ).
Length = 750
Score = 105 bits (251), Expect = 2e-22
Identities = 50/76 (65%), Positives = 61/76 (80%), Gaps = 3/76 (3%)
Frame = +2
Query: 383 RMHSSKRTLRSNDITIPP---MDVELDLCFSLQYPHFVKRDGNRLQIMLQRRKKYKNRTI 553
++ SKR LRSN+I +P ++ EL L FSLQYPHF+KRD N+LQIMLQRRK+YKNRTI
Sbjct: 17 KLQGSKRILRSNEIVLPASGLVETELQLTFSLQYPHFLKRDANKLQIMLQRRKRYKNRTI 76
Query: 554 LGYKTLAEGVIRMDQV 601
LGYKTLA G+I M +V
Sbjct: 77 LGYKTLAVGLINMAEV 92
>AK096644-1|BAC04831.1| 829|Homo sapiens protein ( Homo sapiens
cDNA FLJ39325 fis, clone OCBBF2015334, highly similar to
Rattus norvegicus cytosolic sorting protein PACS-1a
(PACS-1) ).
Length = 829
Score = 36.7 bits (81), Expect = 0.088
Identities = 13/21 (61%), Positives = 17/21 (80%)
Frame = +2
Query: 212 PVPMKLFAAWEVDRTPSNCIP 274
PV M L+A WEVDR+ S+C+P
Sbjct: 98 PVQMNLYATWEVDRSSSSCVP 118
>BC150203-1|AAI50204.1| 816|Homo sapiens two pore segment channel 1
protein.
Length = 816
Score = 30.7 bits (66), Expect = 5.8
Identities = 15/57 (26%), Positives = 27/57 (47%)
Frame = +3
Query: 531 RNTKTVLSLDIKLWLKVSSEWIKFLQRSMDMELELIGVGGEKWVQPPGSR*AKLSIT 701
R ++T L +K++ + EW + R + + +L QPPGSR ++T
Sbjct: 760 RRSRTKSDLSLKMYQEEIQEWYEEHAREQEQQRQLSSSAAPAAQQPPGSRQRSQTVT 816
>AY083666-1|AAM01199.1| 816|Homo sapiens two-pore channel 1
protein.
Length = 816
Score = 30.7 bits (66), Expect = 5.8
Identities = 15/57 (26%), Positives = 27/57 (47%)
Frame = +3
Query: 531 RNTKTVLSLDIKLWLKVSSEWIKFLQRSMDMELELIGVGGEKWVQPPGSR*AKLSIT 701
R ++T L +K++ + EW + R + + +L QPPGSR ++T
Sbjct: 760 RRSRTKSDLSLKMYQEEIQEWYEEHAREQEQQRQLSSSAAPAAQQPPGSRQRSQTVT 816
>AB032995-1|BAA86483.2| 857|Homo sapiens KIAA1169 protein protein.
Length = 857
Score = 30.7 bits (66), Expect = 5.8
Identities = 15/57 (26%), Positives = 27/57 (47%)
Frame = +3
Query: 531 RNTKTVLSLDIKLWLKVSSEWIKFLQRSMDMELELIGVGGEKWVQPPGSR*AKLSIT 701
R ++T L +K++ + EW + R + + +L QPPGSR ++T
Sbjct: 801 RRSRTKSDLSLKMYQEEIQEWYEEHAREQEQQRQLSSSAAPAAQQPPGSRQRSQTVT 857
>Z99757-1|CAB75612.1| 520|Homo sapiens c394H11.1 (similar to SOX
(SRY (sex determining region Y))) protein.
Length = 520
Score = 30.3 bits (65), Expect = 7.7
Identities = 17/42 (40%), Positives = 22/42 (52%)
Frame = -1
Query: 382 CREDDGARTSPASGAAAGIAKRSTDAQPRYPKRT*PWNAIGR 257
C G R S A+ AAAG +T +PR P+R P + GR
Sbjct: 19 CGSRSGTRASAAAAAAAGARVGATARRPRVPER--PQGSPGR 58
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 109,550,665
Number of Sequences: 237096
Number of extensions: 2357965
Number of successful extensions: 9487
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 9207
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9476
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8959138240
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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