Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-5987
(823 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U46675-2|AAB52644.1| 125|Caenorhabditis elegans Hypothetical pr... 36 0.035
AF016448-12|AAB65959.1| 316|Caenorhabditis elegans Hypothetical... 35 0.061
L15313-8|AAA28196.1| 469|Caenorhabditis elegans Hypothetical pr... 31 1.3
AF016682-3|AAB66186.2| 308|Caenorhabditis elegans Hypothetical ... 31 1.3
Z37983-4|CAA86057.1| 803|Caenorhabditis elegans Hypothetical pr... 30 1.7
Z70686-12|CAB54289.1| 2584|Caenorhabditis elegans Hypothetical p... 29 3.0
Z70686-11|CAA94615.1| 2606|Caenorhabditis elegans Hypothetical p... 29 3.0
Z70686-8|CAM35837.1| 1427|Caenorhabditis elegans Hypothetical pr... 29 3.0
Z70686-7|CAM35836.1| 1405|Caenorhabditis elegans Hypothetical pr... 29 3.0
Z70310-9|CAB54294.1| 2584|Caenorhabditis elegans Hypothetical pr... 29 3.0
Z70310-8|CAA94370.1| 2606|Caenorhabditis elegans Hypothetical pr... 29 3.0
U41270-1|AAA82439.2| 411|Caenorhabditis elegans Hypothetical pr... 29 5.3
U41036-5|AAV28332.1| 475|Caenorhabditis elegans Hypothetical pr... 29 5.3
Z49126-3|CAA88941.2| 374|Caenorhabditis elegans Hypothetical pr... 28 7.0
U61945-3|AAB03126.2| 451|Caenorhabditis elegans Hypothetical pr... 28 7.0
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 28 7.0
AC087081-8|AAY55899.1| 499|Caenorhabditis elegans Hypothetical ... 28 7.0
U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical pr... 28 9.3
>U46675-2|AAB52644.1| 125|Caenorhabditis elegans Hypothetical
protein F35A5.5 protein.
Length = 125
Score = 35.9 bits (79), Expect = 0.035
Identities = 15/35 (42%), Positives = 21/35 (60%)
Frame = +1
Query: 181 IGVPIPHPVAVSVPQYVKVPIPQPYPVHVTVEQPI 285
I +P P PV VPQ V VP+P P P+ + + P+
Sbjct: 7 IPIPAPVPVPAPVPQPVPVPMPMPMPMPMPMPVPV 41
Score = 35.1 bits (77), Expect = 0.061
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +1
Query: 154 PYHVTVVKKIGVPIPHPVAVSVPQYVKVPIPQPYPVHVTVE 276
P + + P+P PV V +P + +P+P P PV V V+
Sbjct: 6 PIPIPAPVPVPAPVPQPVPVPMPMPMPMPMPMPVPVPVPVQ 46
Score = 34.7 bits (76), Expect = 0.081
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = +1
Query: 181 IGVPIPHPVAVSVPQYVKVPIPQPYPVHVTVEQPI 285
I +PIP PV V P VP+P P P+ + + P+
Sbjct: 5 IPIPIPAPVPVPAPVPQPVPVPMPMPMPMPMPMPV 39
Score = 33.9 bits (74), Expect = 0.14
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = +1
Query: 187 VPIPHPVAVSVPQYVKVPIPQPYPVHVTVEQPI 285
VP+P PV VP + +P+P P P+ V V P+
Sbjct: 13 VPVPAPVPQPVPVPMPMPMPMPMPMPVPVPVPV 45
Score = 33.5 bits (73), Expect = 0.19
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = +1
Query: 154 PYHVTVVKKIGVPIPHPVAVSVPQYVKVPIPQPYPVHVTV 273
P + + + VP P P V VP + +P+P P PV V V
Sbjct: 4 PIPIPIPAPVPVPAPVPQPVPVPMPMPMPMPMPMPVPVPV 43
Score = 32.3 bits (70), Expect = 0.43
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = +1
Query: 187 VPIPHPVAVSVPQYVKVPIPQPYPVHVTVEQPI 285
+P P P+ + P V P+PQP PV + + P+
Sbjct: 1 MPPPIPIPIPAPVPVPAPVPQPVPVPMPMPMPM 33
>AF016448-12|AAB65959.1| 316|Caenorhabditis elegans Hypothetical
protein F41E6.11 protein.
Length = 316
Score = 35.1 bits (77), Expect = 0.061
Identities = 15/26 (57%), Positives = 18/26 (69%)
Frame = +1
Query: 187 VPIPHPVAVSVPQYVKVPIPQPYPVH 264
VP+P PV V VP V VP+P P PV+
Sbjct: 156 VPVPVPVQVPVPIRVPVPVPVPTPVY 181
Score = 29.5 bits (63), Expect = 3.0
Identities = 16/40 (40%), Positives = 19/40 (47%)
Frame = +1
Query: 154 PYHVTVVKKIGVPIPHPVAVSVPQYVKVPIPQPYPVHVTV 273
P V V ++ VP+P P V P Y VP P P P V
Sbjct: 161 PVQVPVPIRVPVPVPVPTPVYQPTYCAVP-PCPAPAATPV 199
Score = 28.3 bits (60), Expect = 7.0
Identities = 16/35 (45%), Positives = 20/35 (57%), Gaps = 3/35 (8%)
Frame = +1
Query: 190 PIPHPVAVS-VPQYVKVPIPQ--PYPVHVTVEQPI 285
P P PVA V Q+V VP+P P P+ V V P+
Sbjct: 142 PCPAPVAPQPVIQHVPVPVPVQVPVPIRVPVPVPV 176
>L15313-8|AAA28196.1| 469|Caenorhabditis elegans Hypothetical
protein ZK353.8 protein.
Length = 469
Score = 30.7 bits (66), Expect = 1.3
Identities = 12/33 (36%), Positives = 16/33 (48%)
Frame = +1
Query: 178 KIGVPIPHPVAVSVPQYVKVPIPQPYPVHVTVE 276
++ P P P V VP PIP P PV ++
Sbjct: 125 QLSTPSPSPAPVQVPASTDAPIPAPTPVTAPIQ 157
>AF016682-3|AAB66186.2| 308|Caenorhabditis elegans Hypothetical
protein T07D3.6 protein.
Length = 308
Score = 30.7 bits (66), Expect = 1.3
Identities = 14/40 (35%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = +1
Query: 130 TRTQEHTKPYHVTVV-KKIGVPIPHPVAVSVPQYVKVPIP 246
+R Q+ T +VT++ VPI HP +S+ +K+P+P
Sbjct: 62 SRKQKFTYSQNVTLLPNNTRVPIYHPTCISILSQMKLPVP 101
>Z37983-4|CAA86057.1| 803|Caenorhabditis elegans Hypothetical
protein B0393.4 protein.
Length = 803
Score = 30.3 bits (65), Expect = 1.7
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = +1
Query: 163 VTVVKKIGVPIPHPVAVSVPQYVKVPIPQPYPV 261
V V + P+P PV VP+ PI +P PV
Sbjct: 108 VAVTLPVPEPVPEPVPEPVPESTPEPISEPLPV 140
Score = 27.9 bits (59), Expect = 9.3
Identities = 13/36 (36%), Positives = 20/36 (55%), Gaps = 2/36 (5%)
Frame = +1
Query: 181 IGVPIPHPVAVSVPQYVKVPIPQPY--PVHVTVEQP 282
+ +P+P PV VP+ V P+P P+ V E+P
Sbjct: 110 VTLPVPEPVPEPVPEPVPESTPEPISEPLPVVQEEP 145
>Z70686-12|CAB54289.1| 2584|Caenorhabditis elegans Hypothetical
protein R11A8.7b protein.
Length = 2584
Score = 29.5 bits (63), Expect = 3.0
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = +1
Query: 190 PIPHPVAVSVPQYVKVPIPQPYPVHVTVEQP 282
P P P V P+ V + P P PV + VE+P
Sbjct: 1639 PEPEPEPVPEPEPVVISEPVPEPVPIVVEEP 1669
>Z70686-11|CAA94615.1| 2606|Caenorhabditis elegans Hypothetical
protein R11A8.7a protein.
Length = 2606
Score = 29.5 bits (63), Expect = 3.0
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = +1
Query: 190 PIPHPVAVSVPQYVKVPIPQPYPVHVTVEQP 282
P P P V P+ V + P P PV + VE+P
Sbjct: 1639 PEPEPEPVPEPEPVVISEPVPEPVPIVVEEP 1669
>Z70686-8|CAM35837.1| 1427|Caenorhabditis elegans Hypothetical
protein R11A8.7d protein.
Length = 1427
Score = 29.5 bits (63), Expect = 3.0
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = +1
Query: 190 PIPHPVAVSVPQYVKVPIPQPYPVHVTVEQP 282
P P P V P+ V + P P PV + VE+P
Sbjct: 460 PEPEPEPVPEPEPVVISEPVPEPVPIVVEEP 490
>Z70686-7|CAM35836.1| 1405|Caenorhabditis elegans Hypothetical
protein R11A8.7c protein.
Length = 1405
Score = 29.5 bits (63), Expect = 3.0
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = +1
Query: 190 PIPHPVAVSVPQYVKVPIPQPYPVHVTVEQP 282
P P P V P+ V + P P PV + VE+P
Sbjct: 460 PEPEPEPVPEPEPVVISEPVPEPVPIVVEEP 490
>Z70310-9|CAB54294.1| 2584|Caenorhabditis elegans Hypothetical protein
R11A8.7b protein.
Length = 2584
Score = 29.5 bits (63), Expect = 3.0
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = +1
Query: 190 PIPHPVAVSVPQYVKVPIPQPYPVHVTVEQP 282
P P P V P+ V + P P PV + VE+P
Sbjct: 1639 PEPEPEPVPEPEPVVISEPVPEPVPIVVEEP 1669
>Z70310-8|CAA94370.1| 2606|Caenorhabditis elegans Hypothetical protein
R11A8.7a protein.
Length = 2606
Score = 29.5 bits (63), Expect = 3.0
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = +1
Query: 190 PIPHPVAVSVPQYVKVPIPQPYPVHVTVEQP 282
P P P V P+ V + P P PV + VE+P
Sbjct: 1639 PEPEPEPVPEPEPVVISEPVPEPVPIVVEEP 1669
>U41270-1|AAA82439.2| 411|Caenorhabditis elegans Hypothetical
protein AH9.1 protein.
Length = 411
Score = 28.7 bits (61), Expect = 5.3
Identities = 17/53 (32%), Positives = 27/53 (50%)
Frame = +3
Query: 585 VSSKKSNKFEIRNYLRNTGIQNRDFFVLVLVARTAICKYKIVLILYKLNELVL 743
V+ +NK I +RN ++ F L+ R IC++ VL+L LN V+
Sbjct: 204 VTDALTNK-TIYTIVRNEDVEALQVFKFYLIVRECICRWGPVLLLVILNMCVV 255
>U41036-5|AAV28332.1| 475|Caenorhabditis elegans Hypothetical
protein T14E8.4 protein.
Length = 475
Score = 28.7 bits (61), Expect = 5.3
Identities = 12/45 (26%), Positives = 21/45 (46%)
Frame = +1
Query: 121 PKATRTQEHTKPYHVTVVKKIGVPIPHPVAVSVPQYVKVPIPQPY 255
P+ T +Q + +V + G P+ P + P+ V +P PY
Sbjct: 247 PRPTTSQSNGPVIKTVIVDERGAPMNQPTSTQKPKVVHKFLPNPY 291
>Z49126-3|CAA88941.2| 374|Caenorhabditis elegans Hypothetical
protein DH11.4 protein.
Length = 374
Score = 28.3 bits (60), Expect = 7.0
Identities = 17/56 (30%), Positives = 20/56 (35%)
Frame = +3
Query: 102 PSEEWEPEGHTHTGTHEAVPCDRGEEDRSSDSPSGGCVGPAVREGAHTSTLPGPRH 269
PS W P+ G H+ P R P+G G R G H G RH
Sbjct: 89 PSMGWAPKNMLKAGKHQPAPGARANRVHRDPRPNGTKYG---RAGKHEHREWGDRH 141
>U61945-3|AAB03126.2| 451|Caenorhabditis elegans Hypothetical
protein C49C8.5 protein.
Length = 451
Score = 28.3 bits (60), Expect = 7.0
Identities = 14/44 (31%), Positives = 23/44 (52%)
Frame = -1
Query: 247 EVWAPSRTAGPTQPPDGESELRSSSPRSHGTASCVPVCVWPSGS 116
E+ + T GPT+PP ++L S T+S + ++P GS
Sbjct: 170 EITGTTPTPGPTEPPTTTAKLPSDCDEVESTSSGLQT-IYPDGS 212
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 28.3 bits (60), Expect = 7.0
Identities = 15/53 (28%), Positives = 23/53 (43%)
Frame = +1
Query: 118 SPKATRTQEHTKPYHVTVVKKIGVPIPHPVAVSVPQYVKVPIPQPYPVHVTVE 276
S A ++Q VT + VP+ PV V P + P+P P P + +
Sbjct: 1088 SSAAVQSQHPMTAQSVTPMASHIVPVAAPVPVPTPFTIPPPVPPPPPTATSTQ 1140
>AC087081-8|AAY55899.1| 499|Caenorhabditis elegans Hypothetical
protein Y82E9BL.18 protein.
Length = 499
Score = 28.3 bits (60), Expect = 7.0
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = -2
Query: 312 VDNLINRYMDRLLHCDVDRVGLRYGHLHVLRDR 214
VD L+ R + R VDR G+R HL++ +R
Sbjct: 22 VDRLVLRKVSRRFRIQVDRHGIRPRHLYICLNR 54
>U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical
protein C50F7.5 protein.
Length = 309
Score = 27.9 bits (59), Expect = 9.3
Identities = 18/54 (33%), Positives = 23/54 (42%)
Frame = +3
Query: 102 PSEEWEPEGHTHTGTHEAVPCDRGEEDRSSDSPSGGCVGPAVREGAHTSTLPGP 263
PSE+ +P G + G P D +E S PS G V P+ PGP
Sbjct: 183 PSEDPQPSGSSSPG-----PVDPSDEPSPSGPPSPGPVDPSEDPKPSEPPSPGP 231
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,651,161
Number of Sequences: 27780
Number of extensions: 404804
Number of successful extensions: 1442
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1230
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1396
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2029935014
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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