Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-5986
         (790 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D42053-1|BAA07653.2| 1058|Homo sapiens KIAA0091 protein.               56   2e-07
BC114961-1|AAI14962.1| 1052|Homo sapiens membrane-bound transcri...    56   2e-07
BC114555-1|AAI14556.1| 1052|Homo sapiens membrane-bound transcri...    56   2e-07

>D42053-1|BAA07653.2| 1058|Homo sapiens KIAA0091 protein.
          Length = 1058

 Score = 55.6 bits (128), Expect = 2e-07
 Identities = 22/61 (36%), Positives = 36/61 (59%)
 Frame = +1

Query: 475 SQITDWKIIKRNNPAKEYPSDFDVVVLENAGRKALEALQDHPXXXXXXXXXXXXXSIKYV 654
           S++ +W+II RNNP+ +YPSDF+V+ ++   +  L  L+DHP             S+KY 
Sbjct: 86  SEVDNWRIIPRNNPSSDYPSDFEVIQIKEKQKAGLLTLEDHPNIKRVTPQRKVFRSLKYA 145

Query: 655 K 657
           +
Sbjct: 146 E 146


>BC114961-1|AAI14962.1| 1052|Homo sapiens membrane-bound
           transcription factor peptidase, site 1 protein.
          Length = 1052

 Score = 55.6 bits (128), Expect = 2e-07
 Identities = 22/61 (36%), Positives = 36/61 (59%)
 Frame = +1

Query: 475 SQITDWKIIKRNNPAKEYPSDFDVVVLENAGRKALEALQDHPXXXXXXXXXXXXXSIKYV 654
           S++ +W+II RNNP+ +YPSDF+V+ ++   +  L  L+DHP             S+KY 
Sbjct: 80  SEVDNWRIIPRNNPSSDYPSDFEVIQIKEKQKAGLLTLEDHPNIKRVTPQRKVFRSLKYA 139

Query: 655 K 657
           +
Sbjct: 140 E 140


>BC114555-1|AAI14556.1| 1052|Homo sapiens membrane-bound
           transcription factor site-1 protease, isoform 1
           preproprotein protein.
          Length = 1052

 Score = 55.6 bits (128), Expect = 2e-07
 Identities = 22/61 (36%), Positives = 36/61 (59%)
 Frame = +1

Query: 475 SQITDWKIIKRNNPAKEYPSDFDVVVLENAGRKALEALQDHPXXXXXXXXXXXXXSIKYV 654
           S++ +W+II RNNP+ +YPSDF+V+ ++   +  L  L+DHP             S+KY 
Sbjct: 80  SEVDNWRIIPRNNPSSDYPSDFEVIQIKEKQKAGLLTLEDHPNIKRVTPQRKVFRSLKYA 139

Query: 655 K 657
           +
Sbjct: 140 E 140


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 100,380,766
Number of Sequences: 237096
Number of extensions: 1931375
Number of successful extensions: 2798
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2695
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2798
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9646050614
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)