Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-5984
         (735 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_06_0512 - 24460391-24462337                                         30   1.7  
10_05_0101 - 9167383-9167679,9167883-9167961,9168161-9168326,916...    28   8.8  

>11_06_0512 - 24460391-24462337
          Length = 648

 Score = 30.3 bits (65), Expect = 1.7
 Identities = 17/52 (32%), Positives = 25/52 (48%)
 Frame = +1

Query: 409 PRYGLVEHLIRYGVTIKHQ**AIHLYNS*IRLCLYCERAIKFGAGLNKKLLI 564
           P    +   +R G  + H   A+H  +  +R CL C  A   GA + K+LLI
Sbjct: 150 PTMAGIRRCVRDGEQMAHLRRAVHGMDEQLRHCLLCLAAFPEGAVIKKRLLI 201


>10_05_0101 -
           9167383-9167679,9167883-9167961,9168161-9168326,
           9169201-9169299,9169969-9171361
          Length = 677

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 11/20 (55%), Positives = 15/20 (75%)
 Frame = -3

Query: 253 TLQNLHTPRHDLCKCSVRSR 194
           T+QNL+ PR DLC+ S  S+
Sbjct: 5   TIQNLYAPRADLCEPSCSSK 24


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,638,618
Number of Sequences: 37544
Number of extensions: 374869
Number of successful extensions: 787
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 783
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 787
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1933531792
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)