Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-5984
(735 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra... 42 2e-05
AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcript... 40 6e-05
M93689-2|AAA29367.1| 975|Anopheles gambiae protein ( Anopheles ... 39 2e-04
AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcript... 38 2e-04
AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcript... 37 7e-04
AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcript... 36 0.001
M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein. 34 0.004
AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcript... 34 0.005
M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles ... 33 0.007
AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcript... 32 0.021
AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcript... 31 0.028
AB090815-2|BAC57906.1| 973|Anopheles gambiae reverse transcript... 31 0.037
AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcript... 30 0.085
AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcript... 29 0.11
AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcript... 27 0.60
EU068741-1|ABU40241.1| 993|Anopheles gambiae anion exchanger pr... 25 2.4
AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript... 25 2.4
DQ139954-1|ABA29475.1| 451|Anopheles gambiae protein O-fucosylt... 24 5.6
CR954256-3|CAJ14144.1| 659|Anopheles gambiae cyclin protein. 23 9.8
>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
transcriptase protein.
Length = 1049
Score = 41.9 bits (94), Expect = 2e-05
Identities = 31/100 (31%), Positives = 47/100 (47%), Gaps = 4/100 (4%)
Frame = -1
Query: 396 KYLGVTLDSRMTFRPHIKTVRDRAAFILGRLYPMICRRSKMSLRNKV---TLYKTCIRPV 226
K LGV LDS + F+ HI V R +LG + R+ RN + +Y +R V
Sbjct: 845 KDLGVLLDSSLNFKQHIDDVVARGNQLLG-----VVIRTTNEFRNPMCIKAVYNCIVRSV 899
Query: 225 MTYASVVFAHAARIHLKSFQIIQSRFCRIAVG-APWFVRN 109
+ Y+ VV++ + + IQ + R A+ PW RN
Sbjct: 900 LEYSCVVWSPTTASSIARIEAIQRKLTRYALRLLPWQDRN 939
>AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcriptase
protein.
Length = 1099
Score = 40.3 bits (90), Expect = 6e-05
Identities = 23/82 (28%), Positives = 43/82 (52%)
Frame = -1
Query: 444 ISNKMFDQPIPWAPKVKYLGVTLDSRMTFRPHIKTVRDRAAFILGRLYPMICRRSKMSLR 265
I+ ++ D + + ++YLGVTL ++++ PH+K V +RA I ++ R
Sbjct: 715 ITVRVGDVDVTSSRSIRYLGVTLQDKLSWLPHVKEVTERAGKIADATSRLL-RNHSEPRA 773
Query: 264 NKVTLYKTCIRPVMTYASVVFA 199
+K L + VM YA+ V++
Sbjct: 774 SKAKLLASVSESVMRYAAPVWS 795
>M93689-2|AAA29367.1| 975|Anopheles gambiae protein ( Anopheles
gambiae T1 retroposon. ).
Length = 975
Score = 38.7 bits (86), Expect = 2e-04
Identities = 27/89 (30%), Positives = 44/89 (49%), Gaps = 1/89 (1%)
Frame = -1
Query: 399 VKYLGVTLDSRMTFRPHIKTVRDRAAFILGRLYPMICR-RSKMSLRNKVTLYKTCIRPVM 223
++ LG+ LDSR+ F+ + V +A LG + R + LRN LY +RP++
Sbjct: 773 IRDLGIILDSRLNFKLQLDEVLLKANRTLGFILRFTSIFRDQSFLRN---LYYALVRPLL 829
Query: 222 TYASVVFAHAARIHLKSFQIIQSRFCRIA 136
YAS+++ + IQ F R+A
Sbjct: 830 EYASIIWNPPTIDGCSRIESIQRLFTRVA 858
>AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcriptase
protein.
Length = 1022
Score = 38.3 bits (85), Expect = 2e-04
Identities = 22/75 (29%), Positives = 37/75 (49%)
Frame = -1
Query: 399 VKYLGVTLDSRMTFRPHIKTVRDRAAFILGRLYPMICRRSKMSLRNKVTLYKTCIRPVMT 220
+KYLG+ +D R+ + HIK V +RA L M+ RS + + T I +
Sbjct: 714 LKYLGIMIDDRLEYTQHIKYVAERAVTNTNALVRMMPNRSGPRSSRRRIIANTIIAGI-R 772
Query: 219 YASVVFAHAARIHLK 175
YAS ++A + + +
Sbjct: 773 YASSIWAESLKFECR 787
>AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcriptase
protein.
Length = 1173
Score = 36.7 bits (81), Expect = 7e-04
Identities = 27/78 (34%), Positives = 40/78 (51%), Gaps = 3/78 (3%)
Frame = -1
Query: 417 IPWAPKVKYLGVTLDSRMTFRPHIKTVRDRAAFI---LGRLYPMICRRSKMSLRNKVTLY 247
+P++ +K+LGV + +++ PH+ V RA I +GRL P R KMS K L
Sbjct: 744 VPYSRSIKHLGVLVHDHLSWIPHVTAVTQRAVQIAQAVGRLMPN-HRGPKMS---KSRLL 799
Query: 246 KTCIRPVMTYASVVFAHA 193
VM YA+ V+ A
Sbjct: 800 AAVADSVMRYAAPVWHEA 817
>AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcriptase
protein.
Length = 1009
Score = 36.3 bits (80), Expect = 0.001
Identities = 21/71 (29%), Positives = 36/71 (50%)
Frame = -1
Query: 399 VKYLGVTLDSRMTFRPHIKTVRDRAAFILGRLYPMICRRSKMSLRNKVTLYKTCIRPVMT 220
+KYLG+ LD R+ + HI+ +RA + L M+ ++ S + + T + V
Sbjct: 709 LKYLGMVLDDRLEYTSHIRYAVERATKLWTTLVRMMPNKAGPSSNVRRVIALTVVAKV-R 767
Query: 219 YASVVFAHAAR 187
YAS ++ H R
Sbjct: 768 YASPIWCHTLR 778
>M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.
Length = 1212
Score = 34.3 bits (75), Expect = 0.004
Identities = 20/85 (23%), Positives = 42/85 (49%)
Frame = -1
Query: 456 NRNTISNKMFDQPIPWAPKVKYLGVTLDSRMTFRPHIKTVRDRAAFILGRLYPMICRRSK 277
N ++ ++ D + + ++YLGVTL +++ PH++ V RA I + ++ R
Sbjct: 778 NPTQVTIRVGDVEVTSSRTMRYLGVTLHDHLSWLPHVREVTTRARKIADAVTRLL-RNHS 836
Query: 276 MSLRNKVTLYKTCIRPVMTYASVVF 202
+K L + V+ YA+ ++
Sbjct: 837 GPKTSKARLLASVAESVIRYAAPIW 861
>AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcriptase
protein.
Length = 1168
Score = 33.9 bits (74), Expect = 0.005
Identities = 18/69 (26%), Positives = 36/69 (52%)
Frame = -1
Query: 399 VKYLGVTLDSRMTFRPHIKTVRDRAAFILGRLYPMICRRSKMSLRNKVTLYKTCIRPVMT 220
++YLGV L +++RPH++ V D+A ++ L ++ S + +K L ++
Sbjct: 740 IRYLGVMLHDHLSWRPHVEMVADKALRVVRALRGIMRNHSGPQV-SKRKLLAAVAASIIR 798
Query: 219 YASVVFAHA 193
Y + V+ A
Sbjct: 799 YGAPVWTEA 807
>M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles
gambiae RT2 retroposon. ).
Length = 1222
Score = 33.5 bits (73), Expect = 0.007
Identities = 18/88 (20%), Positives = 47/88 (53%), Gaps = 1/88 (1%)
Frame = -1
Query: 444 ISNKMFDQPIPWAPKVKYLGVTLDSRMTFRPHIKTVRDRAAFILGRLYPMICRRS-KMSL 268
++ ++ D + + ++YLGV L + +R H+ V ++A+ ++ + ++ S +
Sbjct: 775 VTFRVGDVEVQSSRSIRYLGVQLQDHLKWRDHVTKVSEKASRVVAAVTRLMQNHSGPRTA 834
Query: 267 RNKVTLYKTCIRPVMTYASVVFAHAARI 184
++++ Y V+ YA+ V+A A ++
Sbjct: 835 KSRLLAY--VAESVLRYAAPVWAEATQV 860
>AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcriptase
protein.
Length = 1154
Score = 31.9 bits (69), Expect = 0.021
Identities = 13/35 (37%), Positives = 23/35 (65%)
Frame = -1
Query: 417 IPWAPKVKYLGVTLDSRMTFRPHIKTVRDRAAFIL 313
+P++ +KYLGV L +++ PH+K V +A I+
Sbjct: 739 VPFSRTLKYLGVRLHYNLSWVPHVKAVIQKATQIV 773
>AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcriptase
protein.
Length = 1201
Score = 31.5 bits (68), Expect = 0.028
Identities = 11/35 (31%), Positives = 24/35 (68%)
Frame = -1
Query: 417 IPWAPKVKYLGVTLDSRMTFRPHIKTVRDRAAFIL 313
+P++ +KYLGV + + +++ PH+K + +A I+
Sbjct: 800 VPFSRSIKYLGVRVHAHLSWVPHVKEITLKATRIV 834
>AB090815-2|BAC57906.1| 973|Anopheles gambiae reverse transcriptase
protein.
Length = 973
Score = 31.1 bits (67), Expect = 0.037
Identities = 13/33 (39%), Positives = 22/33 (66%)
Frame = -1
Query: 441 SNKMFDQPIPWAPKVKYLGVTLDSRMTFRPHIK 343
S ++ D+ I +KYLGV +D R++FR H++
Sbjct: 691 SIRVGDERIESIRHLKYLGVIIDDRLSFRKHVE 723
>AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcriptase
protein.
Length = 1049
Score = 29.9 bits (64), Expect = 0.085
Identities = 22/71 (30%), Positives = 34/71 (47%), Gaps = 3/71 (4%)
Frame = -1
Query: 399 VKYLGVTLDSRMTFRPHIKTVRD---RAAFILGRLYPMICRRSKMSLRNKVTLYKTCIRP 229
+KYLGV +D R+ F+ H++ +A L P I S+R L+ C
Sbjct: 766 LKYLGVVIDDRLKFKSHLEEACKKVMKAINALAAFTPNIGGPCS-SIRR---LHANCAIS 821
Query: 228 VMTYASVVFAH 196
V+ Y + V+AH
Sbjct: 822 VLRYGAPVWAH 832
>AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcriptase
protein.
Length = 1222
Score = 29.5 bits (63), Expect = 0.11
Identities = 15/69 (21%), Positives = 36/69 (52%)
Frame = -1
Query: 399 VKYLGVTLDSRMTFRPHIKTVRDRAAFILGRLYPMICRRSKMSLRNKVTLYKTCIRPVMT 220
++YLGV + ++++PH++ +A ++G + ++ S + K L ++
Sbjct: 737 IRYLGVQIHDHLSWKPHVELSTAKALRVVGVVTAVMRNHSGPQVA-KRRLLAAVAESIIR 795
Query: 219 YASVVFAHA 193
YA+ V++ A
Sbjct: 796 YAAPVWSEA 804
>AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcriptase
protein.
Length = 1173
Score = 27.1 bits (57), Expect = 0.60
Identities = 19/93 (20%), Positives = 46/93 (49%), Gaps = 2/93 (2%)
Frame = -1
Query: 399 VKYLGVTLDSRMTFRPHIKTVRDRAAFILGRLYPMICRRSKMSLRNKVTLYKTCIRPVMT 220
++YLGV +D++++++ H++ + A + + R K L + + ++
Sbjct: 751 IRYLGVVIDNQLSWKSHVEYCTTK-ALRTAKALGCLMRNHSGPKCAKRRLLASVVDSILR 809
Query: 219 YASVVFAHAARIHLKSFQIIQ--SRFCRIAVGA 127
YA+ V+ H A + + +++Q + C I V +
Sbjct: 810 YAAPVW-HEATKNQECRRMLQRVQKHCAIKVSS 841
>EU068741-1|ABU40241.1| 993|Anopheles gambiae anion exchanger
protein.
Length = 993
Score = 25.0 bits (52), Expect = 2.4
Identities = 9/26 (34%), Positives = 18/26 (69%)
Frame = +1
Query: 517 ERAIKFGAGLNKKLLILTILVRITGF 594
ER +K G+GL+ +++L ++ + GF
Sbjct: 778 ERGLKKGSGLHMDVVLLCVINTVCGF 803
>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
protein.
Length = 1248
Score = 25.0 bits (52), Expect = 2.4
Identities = 8/25 (32%), Positives = 15/25 (60%)
Frame = -1
Query: 399 VKYLGVTLDSRMTFRPHIKTVRDRA 325
++YLGV + +RPH+ ++A
Sbjct: 734 IRYLGVMIHDHFLWRPHVTMAVEKA 758
>DQ139954-1|ABA29475.1| 451|Anopheles gambiae protein
O-fucosyltransferase 2 protein.
Length = 451
Score = 23.8 bits (49), Expect = 5.6
Identities = 10/22 (45%), Positives = 12/22 (54%)
Frame = +1
Query: 181 VYAGRVSEHYTCIGHDGAYASF 246
V+ + EH GHDGA A F
Sbjct: 171 VFVDKFEEHVCPKGHDGALAYF 192
>CR954256-3|CAJ14144.1| 659|Anopheles gambiae cyclin protein.
Length = 659
Score = 23.0 bits (47), Expect = 9.8
Identities = 15/67 (22%), Positives = 29/67 (43%)
Frame = -1
Query: 213 SVVFAHAARIHLKSFQIIQSRFCRIAVGAPWFVRNVDLHDDLDLESISKYLQSASMRHFD 34
S V H+ R + ++S ++ G + R+ + D K+ + S RH D
Sbjct: 576 SFVVEHSRRDRDRDRDRMRSDSGKVGGGGGGYDRDDYRRTEKDYRGNGKHDKYGSSRHSD 635
Query: 33 KAARHEN 13
++RH +
Sbjct: 636 SSSRHRS 642
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 725,217
Number of Sequences: 2352
Number of extensions: 14177
Number of successful extensions: 30
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 75260343
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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