Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-5984
(735 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown prot... 111 7e-25
X17551-2|CAA35587.1| 888|Drosophila melanogaster protein ( D.me... 103 3e-22
AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p pro... 103 3e-22
AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein. 99 5e-21
AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse tran... 99 5e-21
AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p pro... 95 7e-20
M22874-2|AAA28675.1| 916|Drosophila melanogaster protein ( D.me... 94 2e-19
AY089343-1|AAL90081.2| 718|Drosophila melanogaster AT16518p pro... 94 2e-19
M17214-2|AAA28508.1| 858|Drosophila melanogaster protein ( D.me... 89 6e-18
AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein ... 70 3e-12
AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein ... 70 3e-12
AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein ... 70 3e-12
AM040243-1|CAJ13339.1| 656|Drosophila melanogaster pol protein ... 70 4e-12
AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein ... 63 4e-10
U02279-1|AAA18301.1| 964|Drosophila melanogaster protein ( Dros... 60 2e-09
AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein ... 60 2e-09
AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein ... 60 2e-09
AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein ... 60 2e-09
AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein ... 60 2e-09
U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative rever... 56 7e-08
U14102-1|AAC46495.1| 299|Drosophila melanogaster putative rever... 55 1e-07
X51968-2|CAA36227.1| 1021|Drosophila melanogaster protein ( Dros... 40 0.005
AY119084-1|AAM50944.1| 543|Drosophila melanogaster LP10938p pro... 31 1.2
AE013599-3359|AAF46819.1| 543|Drosophila melanogaster CG3292-PA... 31 1.2
AJ278684-2|CAB99192.1| 989|Drosophila melanogaster endonuclease... 31 1.6
M14954-2|AAA70222.2| 1219|Drosophila melanogaster putative ORF2 ... 31 2.2
>AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown protein.
Length = 908
Score = 111 bits (268), Expect = 7e-25
Identities = 53/138 (38%), Positives = 76/138 (55%)
Frame = -1
Query: 420 PIPWAPKVKYLGVTLDSRMTFRPHIKTVRDRAAFILGRLYPMICRRSKMSLRNKVTLYKT 241
P+P KYLGV LD R+TF H+ +R R + + Y ++ RSK+SL NK+T+YK
Sbjct: 738 PVPQPNAAKYLGVLLDRRLTFSKHVTDIRTRLRAKVAKHYWLLSSRSKLSLSNKLTIYKQ 797
Query: 240 CIRPVMTYASVVFAHAARIHLKSFQIIQSRFCRIAVGAPWFVRNVDLHDDLDLESISKYL 61
+ P Y ++ A H+K Q IQ++ R+ G WFVRN LH DL L ++ +
Sbjct: 798 ILAPNWKYGCQIWGLACDSHIKRIQAIQNKVARLITGCEWFVRNTTLHRDLKLATVFDEI 857
Query: 60 QSASMRHFDKAARHENPL 7
S R+ D+ RH N L
Sbjct: 858 NKHSSRYHDRLERHRNRL 875
>X17551-2|CAA35587.1| 888|Drosophila melanogaster protein (
D.melanogaster white-one mutant DNA with Doc retroposon,
inserted inwhite locuspromoter region. ).
Length = 888
Score = 103 bits (246), Expect = 3e-22
Identities = 50/137 (36%), Positives = 79/137 (57%)
Frame = -1
Query: 417 IPWAPKVKYLGVTLDSRMTFRPHIKTVRDRAAFILGRLYPMICRRSKMSLRNKVTLYKTC 238
IP A +V YLGV LD R+T+R HI+ L+ +I RS +SL K LY +
Sbjct: 730 IPQADEVTYLGVHLDRRLTWRKHIEAKSKHLKLKARNLHWLINARSPLSLEFKALLYNSV 789
Query: 237 IRPVMTYASVVFAHAARIHLKSFQIIQSRFCRIAVGAPWFVRNVDLHDDLDLESISKYLQ 58
++P+ TY S ++ +A+R ++ Q QSR RI GAPW++RN ++H DL ++ + + +
Sbjct: 790 LKPIWTYGSELWGNASRSNIDIIQRAQSRILRIITGAPWYLRNENIHRDLKIKLVIEVIA 849
Query: 57 SASMRHFDKAARHENPL 7
++ +K H NPL
Sbjct: 850 EKKTKYNEKLTTHTNPL 866
>AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p protein.
Length = 888
Score = 103 bits (246), Expect = 3e-22
Identities = 50/137 (36%), Positives = 79/137 (57%)
Frame = -1
Query: 417 IPWAPKVKYLGVTLDSRMTFRPHIKTVRDRAAFILGRLYPMICRRSKMSLRNKVTLYKTC 238
IP A +V YLGV LD R+T+R HI+ L+ +I RS +SL K LY +
Sbjct: 730 IPQADEVTYLGVHLDRRLTWRKHIEAKSKHLKLKARNLHWLINARSPLSLEFKALLYNSV 789
Query: 237 IRPVMTYASVVFAHAARIHLKSFQIIQSRFCRIAVGAPWFVRNVDLHDDLDLESISKYLQ 58
++P+ TY S ++ +A+R ++ Q QSR RI GAPW++RN ++H DL ++ + + +
Sbjct: 790 LKPIWTYGSELWGNASRSNIDIIQRAQSRILRIITGAPWYLRNENIHRDLKIKLVIEVIA 849
Query: 57 SASMRHFDKAARHENPL 7
++ +K H NPL
Sbjct: 850 EKKTKYNEKLTTHTNPL 866
>AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein.
Length = 884
Score = 99.1 bits (236), Expect = 5e-21
Identities = 39/126 (30%), Positives = 73/126 (57%)
Frame = -1
Query: 435 KMFDQPIPWAPKVKYLGVTLDSRMTFRPHIKTVRDRAAFILGRLYPMICRRSKMSLRNKV 256
++ D PI W ++YLG+ D ++TF+ HI + I+ LYP+I R+SK+S+ NK+
Sbjct: 758 RILDSPIQWVDNIRYLGIIFDKKLTFKYHINNTIMKVNKIICTLYPLINRKSKLSISNKI 817
Query: 255 TLYKTCIRPVMTYASVVFAHAARIHLKSFQIIQSRFCRIAVGAPWFVRNVDLHDDLDLES 76
++KT P++ Y S V+ A+ H+K QI Q++ ++ + P++ LH ++
Sbjct: 818 IIFKTIFNPILMYGSPVWGRCAQTHIKKLQICQNKLLKLIMNLPYYTNTKYLHIKAGVQK 877
Query: 75 ISKYLQ 58
+ + +Q
Sbjct: 878 VQQKIQ 883
>AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse
transcriptase protein.
Length = 832
Score = 99.1 bits (236), Expect = 5e-21
Identities = 39/126 (30%), Positives = 73/126 (57%)
Frame = -1
Query: 435 KMFDQPIPWAPKVKYLGVTLDSRMTFRPHIKTVRDRAAFILGRLYPMICRRSKMSLRNKV 256
++ D PI W ++YLG+ D ++TF+ HI + I+ LYP+I R+SK+S+ NK+
Sbjct: 706 RILDSPIQWVDNIRYLGIIFDKKLTFKYHINNTIMKVNKIICTLYPLINRKSKLSISNKI 765
Query: 255 TLYKTCIRPVMTYASVVFAHAARIHLKSFQIIQSRFCRIAVGAPWFVRNVDLHDDLDLES 76
++KT P++ Y S V+ A+ H+K QI Q++ ++ + P++ LH ++
Sbjct: 766 IIFKTIFNPILMYGSPVWGRCAQTHIKKLQICQNKLLKLIMNLPYYTNTKYLHIKAGVQK 825
Query: 75 ISKYLQ 58
+ + +Q
Sbjct: 826 VQQKIQ 831
>AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p protein.
Length = 906
Score = 95.5 bits (227), Expect = 7e-20
Identities = 47/142 (33%), Positives = 79/142 (55%)
Frame = -1
Query: 432 MFDQPIPWAPKVKYLGVTLDSRMTFRPHIKTVRDRAAFILGRLYPMICRRSKMSLRNKVT 253
+ DQP + KYLG+TLD R+TF PH+K R + +L ++ R+S M+LR K
Sbjct: 744 ILDQP----SQAKYLGITLDKRLTFGPHLKATTRRCYQRMQQLRWLLNRKSTMTLRAKRA 799
Query: 252 LYKTCIRPVMTYASVVFAHAARIHLKSFQIIQSRFCRIAVGAPWFVRNVDLHDDLDLESI 73
+Y C+ P+ Y ++ AA+ + Q++Q+R R P++VR LH DL+L ++
Sbjct: 800 VYVHCVAPIWLYGIQIWGIAAKSNYNRIQVLQNRAMRAITDCPYYVRGTTLHRDLNLHTV 859
Query: 72 SKYLQSASMRHFDKAARHENPL 7
+ + + R+ D+ RH + L
Sbjct: 860 EEQISRHTSRYSDRLRRHHSIL 881
>M22874-2|AAA28675.1| 916|Drosophila melanogaster protein (
D.melanogaster LINEelement J-1, clone J-1. ).
Length = 916
Score = 93.9 bits (223), Expect = 2e-19
Identities = 44/130 (33%), Positives = 75/130 (57%)
Frame = -1
Query: 396 KYLGVTLDSRMTFRPHIKTVRDRAAFILGRLYPMICRRSKMSLRNKVTLYKTCIRPVMTY 217
KYLG+TLD ++TF HI ++ + R+ +I R+K+SL KV +YK+ + P + Y
Sbjct: 751 KYLGITLDRKLTFSRHITNIQQAFRTKVARMSWLIAPRNKLSLGCKVNIYKSILAPCLFY 810
Query: 216 ASVVFAHAARIHLKSFQIIQSRFCRIAVGAPWFVRNVDLHDDLDLESISKYLQSASMRHF 37
V+ AA+ HL +I+Q++ R GAPW++R D+ DL + + LQ+ + ++
Sbjct: 811 GLQVYGIAAKSHLNKIRILQAKTLRRISGAPWYMRTRDIERDLKVPKLGDKLQNIAQKYM 870
Query: 36 DKAARHENPL 7
++ H N L
Sbjct: 871 ERLNVHPNSL 880
>AY089343-1|AAL90081.2| 718|Drosophila melanogaster AT16518p
protein.
Length = 718
Score = 93.9 bits (223), Expect = 2e-19
Identities = 44/130 (33%), Positives = 75/130 (57%)
Frame = -1
Query: 396 KYLGVTLDSRMTFRPHIKTVRDRAAFILGRLYPMICRRSKMSLRNKVTLYKTCIRPVMTY 217
KYLG+TLD ++TF HI ++ + R+ +I R+K+SL KV +YK+ + P + Y
Sbjct: 553 KYLGITLDRKLTFSRHITNIQQAFRTKVARMSWLIAPRNKLSLGCKVNIYKSILAPCLFY 612
Query: 216 ASVVFAHAARIHLKSFQIIQSRFCRIAVGAPWFVRNVDLHDDLDLESISKYLQSASMRHF 37
V+ AA+ HL +I+Q++ R GAPW++R D+ DL + + LQ+ + ++
Sbjct: 613 GLQVYGIAAKSHLNKIRILQAKTLRRISGAPWYMRTRDIERDLKVPKLGDKLQNIAQKYL 672
Query: 36 DKAARHENPL 7
++ H N L
Sbjct: 673 ERLNVHPNSL 682
>M17214-2|AAA28508.1| 858|Drosophila melanogaster protein (
D.melanogaster Fw repetitiveelement putative reverse
transcriptase, complete cds,and putative binding protein,
3' end. ).
Length = 858
Score = 89.0 bits (211), Expect = 6e-18
Identities = 42/117 (35%), Positives = 72/117 (61%)
Frame = -1
Query: 420 PIPWAPKVKYLGVTLDSRMTFRPHIKTVRDRAAFILGRLYPMICRRSKMSLRNKVTLYKT 241
P+P A +V YLGV LD R+T+R HI+ + + L+ +I S +SL +KV LY +
Sbjct: 731 PLPKADEVTYLGVHLDRRLTWRRHIEAKKTQLKLKANNLHWLINSGSPLSLDHKVLLYNS 790
Query: 240 CIRPVMTYASVVFAHAARIHLKSFQIIQSRFCRIAVGAPWFVRNVDLHDDLDLESIS 70
++P+ TY S ++ +A+ ++ Q QS+ R GAPW+VR+ ++ DL++ S++
Sbjct: 791 ILKPIWTYGSQLWGNASNSNIDIIQRAQSKILRTITGAPWYVRSENIQRDLNIPSVT 847
>AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 70.1 bits (164), Expect = 3e-12
Identities = 35/134 (26%), Positives = 67/134 (50%), Gaps = 1/134 (0%)
Frame = -1
Query: 402 KVKYLGVTLDSRMTFRPHIKTVRDRAAFILGRLYPMICRRSKMSLRNKVTLYKTCIRPVM 223
K +YLG+ LD R+TF H+ ++ + +L +I + S + K+ L+K + P+
Sbjct: 807 KQRYLGLMLDRRLTFCAHMTLLKGKTIAAYKKLEWLIGKNSHLPKNAKILLWKQIVSPIW 866
Query: 222 TYASVVFAH-AARIHLKSFQIIQSRFCRIAVGAPWFVRNVDLHDDLDLESISKYLQSASM 46
YA ++ + K Q +++++ R + A + R D+ +++S + AS
Sbjct: 867 HYAIAIWGSLVSDTQAKKIQTMENKYIRRIINASRYTRQADIRTKYNIKSFDEIFDKASQ 926
Query: 45 RHFDKAARHENPLI 4
R+ + HENPLI
Sbjct: 927 RYANSLTDHENPLI 940
>AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 70.1 bits (164), Expect = 3e-12
Identities = 35/134 (26%), Positives = 67/134 (50%), Gaps = 1/134 (0%)
Frame = -1
Query: 402 KVKYLGVTLDSRMTFRPHIKTVRDRAAFILGRLYPMICRRSKMSLRNKVTLYKTCIRPVM 223
K +YLG+ LD R+TF H+ ++ + +L +I + S + K+ L+K + P+
Sbjct: 807 KQRYLGLMLDRRLTFCAHMTLLKGKTIAAYKKLEWLIGKNSHLPKNAKILLWKQIVSPIW 866
Query: 222 TYASVVFAH-AARIHLKSFQIIQSRFCRIAVGAPWFVRNVDLHDDLDLESISKYLQSASM 46
YA ++ + K Q +++++ R + A + R D+ +++S + AS
Sbjct: 867 HYAIAIWGSLVSDTQAKKIQTMENKYIRRIINASRYTRQADIRTKYNIKSFDEIFDKASQ 926
Query: 45 RHFDKAARHENPLI 4
R+ + HENPLI
Sbjct: 927 RYANSLTDHENPLI 940
>AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 70.1 bits (164), Expect = 3e-12
Identities = 35/134 (26%), Positives = 67/134 (50%), Gaps = 1/134 (0%)
Frame = -1
Query: 402 KVKYLGVTLDSRMTFRPHIKTVRDRAAFILGRLYPMICRRSKMSLRNKVTLYKTCIRPVM 223
K +YLG+ LD R+TF H+ ++ + +L +I + S + K+ L+K + P+
Sbjct: 807 KQRYLGLMLDRRLTFCAHMTLLKGKTIAAYKKLEWLIGKNSHLPKNAKILLWKQIVSPIW 866
Query: 222 TYASVVFAH-AARIHLKSFQIIQSRFCRIAVGAPWFVRNVDLHDDLDLESISKYLQSASM 46
YA ++ + K Q +++++ R + A + R D+ +++S + AS
Sbjct: 867 HYAIAIWGSLVSDTQAKKIQTMENKYIRRIINASRYTRQADIRTKYNIKSFDEIFDKASQ 926
Query: 45 RHFDKAARHENPLI 4
R+ + HENPLI
Sbjct: 927 RYANSLTDHENPLI 940
>AM040243-1|CAJ13339.1| 656|Drosophila melanogaster pol protein
protein.
Length = 656
Score = 69.7 bits (163), Expect = 4e-12
Identities = 35/134 (26%), Positives = 67/134 (50%), Gaps = 1/134 (0%)
Frame = -1
Query: 402 KVKYLGVTLDSRMTFRPHIKTVRDRAAFILGRLYPMICRRSKMSLRNKVTLYKTCIRPVM 223
K +YLG+ LD R+TF H+ ++ + +L +I + S + K+ L+K + P+
Sbjct: 360 KQRYLGLMLDRRLTFCAHMTLLKGKTIAAYKKLEWLIGKNSHLPKNAKILLWKQIVSPIW 419
Query: 222 TYASVVFAH-AARIHLKSFQIIQSRFCRIAVGAPWFVRNVDLHDDLDLESISKYLQSASM 46
YA ++ + K Q +++++ R + A + R D+ +++S + AS
Sbjct: 420 HYAIAIWGSLVSDTQAKKIQTMENKYIRRIINASRYTRQADIRTKYNIKSFDETFDKASQ 479
Query: 45 RHFDKAARHENPLI 4
R+ + HENPLI
Sbjct: 480 RYANSLTDHENPLI 493
>AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein
protein.
Length = 1092
Score = 62.9 bits (146), Expect = 4e-10
Identities = 41/181 (22%), Positives = 85/181 (46%), Gaps = 1/181 (0%)
Frame = -1
Query: 552 FVETSSEFDSSFTI*TKPNSTVVQMYSLLLMFNRNTISNKMFDQPIPWAPKVKYLGVTLD 373
+++T S++ + I T +++L N+++ K+ Q I K YLGVTLD
Sbjct: 758 YLKTFSDWADKWGISVNAAKTGHVIFTLKNDLPTNSMNVKIKGQTIKKESKQSYLGVTLD 817
Query: 372 SRMTFRPHIKTVRDRAAFILGRLYPMICRRSKMSLRNKVTLYKTCIRPVMTYASVVFAH- 196
S++T H+ + + + +L ++ RSK+ + K+ + K+ + P+ YA +
Sbjct: 818 SKLTLSSHVTKLLGKYSTAYRKLTWILNGRSKLPTKTKILILKSVLSPIWQYAIAAWGPL 877
Query: 195 AARIHLKSFQIIQSRFCRIAVGAPWFVRNVDLHDDLDLESISKYLQSASMRHFDKAARHE 16
++ Q+ ++R R A + RN + D ++++ ++ Q A R + H
Sbjct: 878 VTDAQIRRVQVEENRKIRDICRAGRYTRNQTIRDLFGVKTVEEFYQQAMHRFSETIKSHP 937
Query: 15 N 13
N
Sbjct: 938 N 938
>U02279-1|AAA18301.1| 964|Drosophila melanogaster protein (
Drosophila melanogastertelomere-associated transposons
TART, TART-A and HeT-A,and TART-A ORF2 gene, partial cds.
).
Length = 964
Score = 60.5 bits (140), Expect = 2e-09
Identities = 41/181 (22%), Positives = 81/181 (44%), Gaps = 1/181 (0%)
Frame = -1
Query: 552 FVETSSEFDSSFTI*TKPNSTVVQMYSLLLMFNRNTISNKMFDQPIPWAPKVKYLGVTLD 373
+++T S++ + I T +Y+L N + K+ Q I K YLGV LD
Sbjct: 630 YLKTFSDWADKWGISVNAAKTGHVIYTLKNDIPTNLKTMKIKGQAIKKESKQSYLGVILD 689
Query: 372 SRMTFRPHIKTVRDRAAFILGRLYPMICRRSKMSLRNKVTLYKTCIRPVMTYASVVFAH- 196
S++T PH+ V + ++ ++ RSK+ K+ + K+ + P+ YA +
Sbjct: 690 SKLTLSPHVTKVVGKYLTAYRKMSWILNERSKLPTNTKMLILKSVLSPIWQYAIAAWGPL 749
Query: 195 AARIHLKSFQIIQSRFCRIAVGAPWFVRNVDLHDDLDLESISKYLQSASMRHFDKAARHE 16
++ Q+ ++R R A + +N + D ++++ ++ Q A R + H
Sbjct: 750 VTDAQIRRIQVEENRKMRDICRAGRYTKNQTIRDRYCVKTVEEFYQQAVHRFSETTKSHP 809
Query: 15 N 13
N
Sbjct: 810 N 810
>AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 60.5 bits (140), Expect = 2e-09
Identities = 41/181 (22%), Positives = 81/181 (44%), Gaps = 1/181 (0%)
Frame = -1
Query: 552 FVETSSEFDSSFTI*TKPNSTVVQMYSLLLMFNRNTISNKMFDQPIPWAPKVKYLGVTLD 373
+++T S++ + I T +Y+L N + K+ Q I K YLGV LD
Sbjct: 746 YLKTFSDWADKWGISVNAAKTGHVIYTLKNDIPTNLKTMKIKGQAIKKESKQSYLGVILD 805
Query: 372 SRMTFRPHIKTVRDRAAFILGRLYPMICRRSKMSLRNKVTLYKTCIRPVMTYASVVFAH- 196
S++T PH+ V + ++ ++ RSK+ K+ + K+ + P+ YA +
Sbjct: 806 SKLTLSPHVTKVVGKYLTAYRKMSWILNERSKLPTNTKMLILKSVLSPIWQYAIAAWGPL 865
Query: 195 AARIHLKSFQIIQSRFCRIAVGAPWFVRNVDLHDDLDLESISKYLQSASMRHFDKAARHE 16
++ Q+ ++R R A + +N + D ++++ ++ Q A R + H
Sbjct: 866 VTDAQIRRIQVEENRKMRDICRAGRYTKNQTIRDRYCVKTVEEFYQQAVHRFSETTKSHP 925
Query: 15 N 13
N
Sbjct: 926 N 926
>AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 60.5 bits (140), Expect = 2e-09
Identities = 41/181 (22%), Positives = 81/181 (44%), Gaps = 1/181 (0%)
Frame = -1
Query: 552 FVETSSEFDSSFTI*TKPNSTVVQMYSLLLMFNRNTISNKMFDQPIPWAPKVKYLGVTLD 373
+++T S++ + I T +Y+L N + K+ Q I K YLGV LD
Sbjct: 746 YLKTFSDWADKWGISVNAAKTGHVIYTLKNDIPTNLKTMKIKGQAIKKESKQSYLGVILD 805
Query: 372 SRMTFRPHIKTVRDRAAFILGRLYPMICRRSKMSLRNKVTLYKTCIRPVMTYASVVFAH- 196
S++T PH+ V + ++ ++ RSK+ K+ + K+ + P+ YA +
Sbjct: 806 SKLTLSPHVTKVVGKYLTAYRKMSWILNERSKLPTNTKMLILKSVLSPIWQYAIAAWGPL 865
Query: 195 AARIHLKSFQIIQSRFCRIAVGAPWFVRNVDLHDDLDLESISKYLQSASMRHFDKAARHE 16
++ Q+ ++R R A + +N + D ++++ ++ Q A R + H
Sbjct: 866 VTDAQIRRIQVEENRKMRDICRAGRYTKNQTIRDRYCVKTVEEFYQQAVHRFSETTKSHP 925
Query: 15 N 13
N
Sbjct: 926 N 926
>AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein
protein.
Length = 1042
Score = 60.5 bits (140), Expect = 2e-09
Identities = 41/181 (22%), Positives = 81/181 (44%), Gaps = 1/181 (0%)
Frame = -1
Query: 552 FVETSSEFDSSFTI*TKPNSTVVQMYSLLLMFNRNTISNKMFDQPIPWAPKVKYLGVTLD 373
+++T S++ + I T +Y+L N + K+ Q I K YLGV LD
Sbjct: 708 YLKTFSDWADKWGISVNAAKTGHVIYTLKNDIPTNLKTMKIKGQAIKKESKQSYLGVILD 767
Query: 372 SRMTFRPHIKTVRDRAAFILGRLYPMICRRSKMSLRNKVTLYKTCIRPVMTYASVVFAH- 196
S++T PH+ V + ++ ++ RSK+ K+ + K+ + P+ YA +
Sbjct: 768 SKLTLSPHVTKVVGKYLTAYRKMSWILNERSKLPTNTKMLILKSVLSPIWQYAIAAWGPL 827
Query: 195 AARIHLKSFQIIQSRFCRIAVGAPWFVRNVDLHDDLDLESISKYLQSASMRHFDKAARHE 16
++ Q+ ++R R A + +N + D ++++ ++ Q A R + H
Sbjct: 828 VTDAQIRRIQVEENRKMRDICRAGRYTKNQTIRDRYCVKTVEEFYQQAVHRFSETTKSHP 887
Query: 15 N 13
N
Sbjct: 888 N 888
>AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 60.5 bits (140), Expect = 2e-09
Identities = 41/181 (22%), Positives = 81/181 (44%), Gaps = 1/181 (0%)
Frame = -1
Query: 552 FVETSSEFDSSFTI*TKPNSTVVQMYSLLLMFNRNTISNKMFDQPIPWAPKVKYLGVTLD 373
+++T S++ + I T +Y+L N + K+ Q I K YLGV LD
Sbjct: 746 YLKTFSDWADKWGISVNAAKTGHVIYTLKNDIPTNLKTMKIKGQAIKKESKQSYLGVILD 805
Query: 372 SRMTFRPHIKTVRDRAAFILGRLYPMICRRSKMSLRNKVTLYKTCIRPVMTYASVVFAH- 196
S++T PH+ V + ++ ++ RSK+ K+ + K+ + P+ YA +
Sbjct: 806 SKLTLSPHVTKVVGKYLTAYRKMSWILNERSKLPTNTKMLILKSVLSPIWQYAIAAWGPL 865
Query: 195 AARIHLKSFQIIQSRFCRIAVGAPWFVRNVDLHDDLDLESISKYLQSASMRHFDKAARHE 16
++ Q+ ++R R A + +N + D ++++ ++ Q A R + H
Sbjct: 866 VTDAQIRRIQVEENRKMRDICRAGRYTKNQTIRDRYCVKTVEEFYQQAVHRFSETTKSHP 925
Query: 15 N 13
N
Sbjct: 926 N 926
>U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative reverse
transcriptase protein.
Length = 1084
Score = 55.6 bits (128), Expect = 7e-08
Identities = 33/142 (23%), Positives = 65/142 (45%), Gaps = 1/142 (0%)
Frame = -1
Query: 435 KMFDQPIPWAPKVKYLGVTLDSRMTFRPHIKTVRDRAAFILGRLYPMICRRSKMSLRNKV 256
K+ Q I K YLGV LDS++T H+ + + ++ ++ RRSK+ + K+
Sbjct: 785 KIKGQVIKIESKQSYLGVILDSKLTLSSHVTKLMGKYTTAYRKMTWILNRRSKLPTKTKM 844
Query: 255 TLYKTCIRPVMTYASVVFAH-AARIHLKSFQIIQSRFCRIAVGAPWFVRNVDLHDDLDLE 79
+ K+ + P+ YA + ++ Q+ ++R R A + N + D ++
Sbjct: 845 LILKSVLSPIWQYAIAAWGPLVTDAQIRRIQVEENRKMRDICRAGRYTSNQTIRDRYGIK 904
Query: 78 SISKYLQSASMRHFDKAARHEN 13
++ ++ Q A R + H N
Sbjct: 905 TVEEFYQQALHRFSETIKSHPN 926
>U14102-1|AAC46495.1| 299|Drosophila melanogaster putative reverse
transcriptase protein.
Length = 299
Score = 54.8 bits (126), Expect = 1e-07
Identities = 32/138 (23%), Positives = 63/138 (45%), Gaps = 1/138 (0%)
Frame = -1
Query: 423 QPIPWAPKVKYLGVTLDSRMTFRPHIKTVRDRAAFILGRLYPMICRRSKMSLRNKVTLYK 244
Q I K YLGV LDS++T H+ + + ++ ++ RRSK+ + K+ + K
Sbjct: 4 QVIKIESKQSYLGVILDSKLTLSSHVTKLMGKYTTAYRKMTWILNRRSKLPTKTKMLILK 63
Query: 243 TCIRPVMTYASVVFAH-AARIHLKSFQIIQSRFCRIAVGAPWFVRNVDLHDDLDLESISK 67
+ + P+ YA + ++ Q+ ++R R A + N + D ++++ +
Sbjct: 64 SVLSPIWQYAIAAWGPLVTDAQIRRIQVEENRKMRDICRAGRYTSNQTIRDRYGIKTVEE 123
Query: 66 YLQSASMRHFDKAARHEN 13
+ Q A R + H N
Sbjct: 124 FYQQALHRFSETIKSHPN 141
>X51968-2|CAA36227.1| 1021|Drosophila melanogaster protein (
Drosophila melanogasterDNA for type I retrotransposable
element R1Dm. ).
Length = 1021
Score = 39.5 bits (88), Expect = 0.005
Identities = 20/76 (26%), Positives = 38/76 (50%)
Frame = -1
Query: 417 IPWAPKVKYLGVTLDSRMTFRPHIKTVRDRAAFILGRLYPMICRRSKMSLRNKVTLYKTC 238
+P+ +YLG+T+ M F HI ++R R ++G L ++ S R + T+Y
Sbjct: 728 LPYVRSCRYLGITVSEGMKFLTHIASLRQRMTGVVGALARVLRADWGFSPRARRTIYDGL 787
Query: 237 IRPVMTYASVVFAHAA 190
+ P + + + V+ A
Sbjct: 788 MAPCVLFGAPVWYDTA 803
>AY119084-1|AAM50944.1| 543|Drosophila melanogaster LP10938p
protein.
Length = 543
Score = 31.5 bits (68), Expect = 1.2
Identities = 17/29 (58%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
Frame = +1
Query: 226 DGAYASFVECHLISKG-HFTSPTYHRVET 309
DG Y FVE LI G HF SPTY ET
Sbjct: 366 DGGYFLFVEGGLIDYGNHFNSPTYSLSET 394
>AE013599-3359|AAF46819.1| 543|Drosophila melanogaster CG3292-PA
protein.
Length = 543
Score = 31.5 bits (68), Expect = 1.2
Identities = 17/29 (58%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
Frame = +1
Query: 226 DGAYASFVECHLISKG-HFTSPTYHRVET 309
DG Y FVE LI G HF SPTY ET
Sbjct: 366 DGGYFLFVEGGLIDYGNHFNSPTYSLSET 394
>AJ278684-2|CAB99192.1| 989|Drosophila melanogaster
endonuclease/reverse transcriptase protein.
Length = 989
Score = 31.1 bits (67), Expect = 1.6
Identities = 15/42 (35%), Positives = 24/42 (57%), Gaps = 3/42 (7%)
Frame = -1
Query: 408 APKVKYLGVTLDSRMTFRPHIKTVRDRAAF---ILGRLYPMI 292
A +KYLGV +D R++F+ H + +AA L R+ P +
Sbjct: 714 AETLKYLGVLIDRRLSFKAHARYASKKAAMTAAALARIMPNV 755
>M14954-2|AAA70222.2| 1219|Drosophila melanogaster putative ORF2
protein.
Length = 1219
Score = 30.7 bits (66), Expect = 2.2
Identities = 20/97 (20%), Positives = 42/97 (43%)
Frame = -1
Query: 417 IPWAPKVKYLGVTLDSRMTFRPHIKTVRDRAAFILGRLYPMICRRSKMSLRNKVTLYKTC 238
IP +K LG+TL+++ + HI + + L + + + + + + K
Sbjct: 731 IPSVTSLKILGITLNNKYKWNTHINLLLPKLHNKLNIIKCLSSLKFNCNTHTLLNVAKAT 790
Query: 237 IRPVMTYASVVFAHAARIHLKSFQIIQSRFCRIAVGA 127
I + Y ++ HA + L + + R+A+GA
Sbjct: 791 IIAKLEYGLFLYGHAPKSILNKIKTPFNSAIRLALGA 827
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,877,228
Number of Sequences: 53049
Number of extensions: 631594
Number of successful extensions: 1445
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 1416
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1441
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3314233461
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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