Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-5977
(429 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY739658-1|AAU85297.1| 664|Apis mellifera hyperpolarization-act... 23 1.4
AY280848-1|AAQ16312.1| 632|Apis mellifera hyperpolarization-act... 23 1.4
DQ011226-1|AAY63895.1| 471|Apis mellifera Rh-like protein protein. 23 1.9
AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex det... 23 1.9
DQ325105-1|ABD14119.1| 180|Apis mellifera complementary sex det... 22 2.5
DQ325104-1|ABD14118.1| 180|Apis mellifera complementary sex det... 22 2.5
DQ325103-1|ABD14117.1| 182|Apis mellifera complementary sex det... 22 2.5
AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex det... 22 2.5
DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex det... 22 3.3
DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex det... 22 3.3
DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex det... 22 3.3
DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex det... 22 3.3
DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex det... 22 3.3
DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex det... 22 3.3
AY569720-1|AAS86673.1| 406|Apis mellifera complementary sex det... 22 3.3
AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex det... 22 3.3
>AY739658-1|AAU85297.1| 664|Apis mellifera
hyperpolarization-activated ion channelvariant L
protein.
Length = 664
Score = 23.0 bits (47), Expect = 1.4
Identities = 8/17 (47%), Positives = 13/17 (76%)
Frame = -3
Query: 277 RHAGRFFQQERILGAMN 227
R+ G+FF +E ILG ++
Sbjct: 419 RYQGKFFDEELILGELS 435
>AY280848-1|AAQ16312.1| 632|Apis mellifera
hyperpolarization-activated ion channel protein.
Length = 632
Score = 23.0 bits (47), Expect = 1.4
Identities = 8/17 (47%), Positives = 13/17 (76%)
Frame = -3
Query: 277 RHAGRFFQQERILGAMN 227
R+ G+FF +E ILG ++
Sbjct: 387 RYQGKFFDEELILGELS 403
>DQ011226-1|AAY63895.1| 471|Apis mellifera Rh-like protein protein.
Length = 471
Score = 22.6 bits (46), Expect = 1.9
Identities = 9/22 (40%), Positives = 12/22 (54%)
Frame = +1
Query: 4 LSLFYLSIMSGVWVLFHFLMNF 69
L L Y + +W+ F FLM F
Sbjct: 51 LHLLYQDVHVMIWIGFGFLMTF 72
>AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 22.6 bits (46), Expect = 1.9
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +2
Query: 134 YFNKKPHYNISKDKFSTVPMP 196
Y NKK +YNI+ + VP+P
Sbjct: 321 YNNKKLYYNINYIEQIPVPVP 341
>DQ325105-1|ABD14119.1| 180|Apis mellifera complementary sex
determiner protein.
Length = 180
Score = 22.2 bits (45), Expect = 2.5
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = +2
Query: 137 FNKKPHYNISKDKFSTVPMP 196
+NKK +YNI+ + VP+P
Sbjct: 102 YNKKLYYNINYIEQIPVPVP 121
>DQ325104-1|ABD14118.1| 180|Apis mellifera complementary sex
determiner protein.
Length = 180
Score = 22.2 bits (45), Expect = 2.5
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = +2
Query: 137 FNKKPHYNISKDKFSTVPMP 196
+NKK +YNI+ + VP+P
Sbjct: 102 YNKKLYYNINYIEQIPVPVP 121
>DQ325103-1|ABD14117.1| 182|Apis mellifera complementary sex
determiner protein.
Length = 182
Score = 22.2 bits (45), Expect = 2.5
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = +2
Query: 137 FNKKPHYNISKDKFSTVPMP 196
+NKK +YNI+ + VP+P
Sbjct: 104 YNKKLYYNINYIEQIPVPVP 123
>AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex
determiner protein.
Length = 418
Score = 22.2 bits (45), Expect = 2.5
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = +2
Query: 137 FNKKPHYNISKDKFSTVPMP 196
+NKK +YNI+ + VP+P
Sbjct: 340 YNKKLYYNINYIEQIPVPVP 359
>DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.8 bits (44), Expect = 3.3
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = +2
Query: 137 FNKKPHYNISKDKFSTVPMP 196
+NKK +YNI + VP+P
Sbjct: 108 YNKKLYYNIINIEQIPVPVP 127
>DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.8 bits (44), Expect = 3.3
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = +2
Query: 137 FNKKPHYNISKDKFSTVPMP 196
+NKK +YNI + VP+P
Sbjct: 108 YNKKLYYNIINIEQIPVPVP 127
>DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.8 bits (44), Expect = 3.3
Identities = 8/20 (40%), Positives = 14/20 (70%)
Frame = +2
Query: 137 FNKKPHYNISKDKFSTVPMP 196
+NKK +YNI+ + +P+P
Sbjct: 104 YNKKLYYNINYIEQIPIPVP 123
>DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.8 bits (44), Expect = 3.3
Identities = 8/20 (40%), Positives = 14/20 (70%)
Frame = +2
Query: 137 FNKKPHYNISKDKFSTVPMP 196
+NKK +YNI+ + +P+P
Sbjct: 104 YNKKLYYNINYIEQIPIPVP 123
>DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.8 bits (44), Expect = 3.3
Identities = 8/20 (40%), Positives = 14/20 (70%)
Frame = +2
Query: 137 FNKKPHYNISKDKFSTVPMP 196
+NKK +YNI+ + +P+P
Sbjct: 104 YNKKLYYNINYIEQIPIPVP 123
>DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.8 bits (44), Expect = 3.3
Identities = 8/20 (40%), Positives = 14/20 (70%)
Frame = +2
Query: 137 FNKKPHYNISKDKFSTVPMP 196
+NKK +YNI+ + +P+P
Sbjct: 104 YNKKLYYNINYIEQIPIPVP 123
>AY569720-1|AAS86673.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 21.8 bits (44), Expect = 3.3
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = +2
Query: 137 FNKKPHYNISKDKFSTVPMP 196
+NKK +YNI + VP+P
Sbjct: 328 YNKKLYYNIINIEQIPVPVP 347
>AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 21.8 bits (44), Expect = 3.3
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = +2
Query: 137 FNKKPHYNISKDKFSTVPMP 196
+NKK +YNI + VP+P
Sbjct: 332 YNKKLYYNIINIEQIPVPVP 351
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 113,686
Number of Sequences: 438
Number of extensions: 2482
Number of successful extensions: 18
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 11121030
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
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