Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-5976
         (608 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_04_0150 - 23130038-23130281,23130550-23130762,23130856-23133155     28   6.7  
04_04_1441 - 33621423-33622118,33622251-33622315,33623140-336232...    27   8.8  

>04_04_0150 - 23130038-23130281,23130550-23130762,23130856-23133155
          Length = 918

 Score = 27.9 bits (59), Expect = 6.7
 Identities = 10/29 (34%), Positives = 21/29 (72%)
 Frame = -3

Query: 507 VFDDISFILLISIEKYCF*CTLSYVLHMN 421
           +FDD++F+L+I    +CF   L Y+++++
Sbjct: 885 IFDDMTFLLIIITSIFCF--NLQYLIYLS 911


>04_04_1441 -
           33621423-33622118,33622251-33622315,33623140-33623227,
           33623957-33625570
          Length = 820

 Score = 27.5 bits (58), Expect = 8.8
 Identities = 19/43 (44%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
 Frame = -2

Query: 280 SSRGSNQCFSNTG-PSKSSASLNLAPDRKRDPLRRSGEKLSGL 155
           S  GS   FS  G PS  S+ LNL P+   D L  S E+  GL
Sbjct: 738 SKMGSGGQFSERGGPSAPSSQLNLIPE--SDDLTVSDEEFDGL 778


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,963,751
Number of Sequences: 37544
Number of extensions: 273977
Number of successful extensions: 549
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 537
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 549
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1454766756
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)