Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-5976
         (608 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC027971-1|AAH27971.1|  911|Homo sapiens brevican protein.             30   7.3  
BC022938-1|AAH22938.1|  911|Homo sapiens brevican protein.             30   7.3  
BC010571-1|AAH10571.1|  911|Homo sapiens brevican protein.             30   7.3  
BC009117-1|AAH09117.1|  911|Homo sapiens brevican protein.             30   7.3  
AY358372-1|AAQ88738.1|  911|Homo sapiens Brevican Core Pro protein.    30   7.3  
AL590666-18|CAI16352.1|  911|Homo sapiens brevican protein.            30   7.3  
AL365181-12|CAI13056.1|  911|Homo sapiens brevican protein.            30   7.3  
AL137504-1|CAB70776.1|  330|Homo sapiens hypothetical protein pr...    30   7.3  
AF228710-1|AAG23134.1|  911|Homo sapiens chondroitin sulfate pro...    30   7.3  
AB209570-1|BAD92807.1|  850|Homo sapiens brevican isoform 1 vari...    30   7.3  

>BC027971-1|AAH27971.1|  911|Homo sapiens brevican protein.
          Length = 911

 Score = 29.9 bits (64), Expect = 7.3
 Identities = 10/17 (58%), Positives = 12/17 (70%)
 Frame = -1

Query: 590 NWVPGPPSSFFLNGSYC 540
           NW PG P S+FL+G  C
Sbjct: 768 NWNPGQPDSYFLSGENC 784


>BC022938-1|AAH22938.1|  911|Homo sapiens brevican protein.
          Length = 911

 Score = 29.9 bits (64), Expect = 7.3
 Identities = 10/17 (58%), Positives = 12/17 (70%)
 Frame = -1

Query: 590 NWVPGPPSSFFLNGSYC 540
           NW PG P S+FL+G  C
Sbjct: 768 NWNPGQPDSYFLSGENC 784


>BC010571-1|AAH10571.1|  911|Homo sapiens brevican protein.
          Length = 911

 Score = 29.9 bits (64), Expect = 7.3
 Identities = 10/17 (58%), Positives = 12/17 (70%)
 Frame = -1

Query: 590 NWVPGPPSSFFLNGSYC 540
           NW PG P S+FL+G  C
Sbjct: 768 NWNPGQPDSYFLSGENC 784


>BC009117-1|AAH09117.1|  911|Homo sapiens brevican protein.
          Length = 911

 Score = 29.9 bits (64), Expect = 7.3
 Identities = 10/17 (58%), Positives = 12/17 (70%)
 Frame = -1

Query: 590 NWVPGPPSSFFLNGSYC 540
           NW PG P S+FL+G  C
Sbjct: 768 NWNPGQPDSYFLSGENC 784


>AY358372-1|AAQ88738.1|  911|Homo sapiens Brevican Core Pro protein.
          Length = 911

 Score = 29.9 bits (64), Expect = 7.3
 Identities = 10/17 (58%), Positives = 12/17 (70%)
 Frame = -1

Query: 590 NWVPGPPSSFFLNGSYC 540
           NW PG P S+FL+G  C
Sbjct: 768 NWNPGQPDSYFLSGENC 784


>AL590666-18|CAI16352.1|  911|Homo sapiens brevican protein.
          Length = 911

 Score = 29.9 bits (64), Expect = 7.3
 Identities = 10/17 (58%), Positives = 12/17 (70%)
 Frame = -1

Query: 590 NWVPGPPSSFFLNGSYC 540
           NW PG P S+FL+G  C
Sbjct: 768 NWNPGQPDSYFLSGENC 784


>AL365181-12|CAI13056.1|  911|Homo sapiens brevican protein.
          Length = 911

 Score = 29.9 bits (64), Expect = 7.3
 Identities = 10/17 (58%), Positives = 12/17 (70%)
 Frame = -1

Query: 590 NWVPGPPSSFFLNGSYC 540
           NW PG P S+FL+G  C
Sbjct: 768 NWNPGQPDSYFLSGENC 784


>AL137504-1|CAB70776.1|  330|Homo sapiens hypothetical protein
           protein.
          Length = 330

 Score = 29.9 bits (64), Expect = 7.3
 Identities = 10/17 (58%), Positives = 12/17 (70%)
 Frame = -1

Query: 590 NWVPGPPSSFFLNGSYC 540
           NW PG P S+FL+G  C
Sbjct: 187 NWNPGQPDSYFLSGENC 203


>AF228710-1|AAG23134.1|  911|Homo sapiens chondroitin sulfate
           proteoglycan BEHAB/brevican protein.
          Length = 911

 Score = 29.9 bits (64), Expect = 7.3
 Identities = 10/17 (58%), Positives = 12/17 (70%)
 Frame = -1

Query: 590 NWVPGPPSSFFLNGSYC 540
           NW PG P S+FL+G  C
Sbjct: 768 NWNPGQPDSYFLSGENC 784


>AB209570-1|BAD92807.1|  850|Homo sapiens brevican isoform 1 variant
           protein.
          Length = 850

 Score = 29.9 bits (64), Expect = 7.3
 Identities = 10/17 (58%), Positives = 12/17 (70%)
 Frame = -1

Query: 590 NWVPGPPSSFFLNGSYC 540
           NW PG P S+FL+G  C
Sbjct: 707 NWNPGQPDSYFLSGENC 723


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 83,067,700
Number of Sequences: 237096
Number of extensions: 1610572
Number of successful extensions: 2599
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2541
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2599
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6466646650
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)