Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-5976
         (608 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U13637-1|AAB60217.1| 1984|Drosophila melanogaster vitellogenin r...    28   8.7  
AY071063-1|AAL48685.1|  802|Drosophila melanogaster RE14222p pro...    28   8.7  
AE014297-4705|AAF57115.2|  802|Drosophila melanogaster CG11318-P...    28   8.7  

>U13637-1|AAB60217.1| 1984|Drosophila melanogaster vitellogenin
            receptor protein.
          Length = 1984

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 16/42 (38%), Positives = 20/42 (47%)
 Frame = -2

Query: 283  VSSRGSNQCFSNTGPSKSSASLNLAPDRKRDPLRRSGEKLSG 158
            VSSRGSN  F+ T  S S A+   +       L R  +  SG
Sbjct: 1869 VSSRGSNDTFTTTSASSSFAAQQFSVPNALQRLLRPRQSASG 1910


>AY071063-1|AAL48685.1|  802|Drosophila melanogaster RE14222p
           protein.
          Length = 802

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 17/55 (30%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
 Frame = -2

Query: 463 ILFLMYSFLCTTHEL-KNIAKADLNSIKKQKAILRITVILFFLPILIALGGYFSF 302
           ++  +Y F   +H L ++I K +   + KQ   +R++++LFFL  L  + G F+F
Sbjct: 678 LVIFVYVFYSISHSLSQSIHKNEKKMVVKQ---IRLSIMLFFLLGLTWIFGIFAF 729


>AE014297-4705|AAF57115.2|  802|Drosophila melanogaster CG11318-PA
           protein.
          Length = 802

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 17/55 (30%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
 Frame = -2

Query: 463 ILFLMYSFLCTTHEL-KNIAKADLNSIKKQKAILRITVILFFLPILIALGGYFSF 302
           ++  +Y F   +H L ++I K +   + KQ   +R++++LFFL  L  + G F+F
Sbjct: 678 LVIFVYVFYSISHSLSQSIHKNEKKMVVKQ---IRLSIMLFFLLGLTWIFGIFAF 729


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,150,078
Number of Sequences: 53049
Number of extensions: 467643
Number of successful extensions: 895
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 884
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 895
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2503659279
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)