Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-5964
(584 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC067751-1|AAH67751.1| 164|Homo sapiens v-maf musculoaponeuroti... 31 4.0
BC015037-1|AAH15037.1| 164|Homo sapiens v-maf musculoaponeuroti... 31 4.0
AL021977-2|CAB45266.1| 164|Homo sapiens v-maf musculoaponeuroti... 31 4.0
AK002001-1|BAA92029.1| 164|Homo sapiens protein ( Homo sapiens ... 31 4.0
AJ010857-1|CAB52435.1| 164|Homo sapiens MAFF protein protein. 31 4.0
AB025247-1|BAA86871.1| 164|Homo sapiens Maf-related DNA binding... 31 4.0
AY515706-1|AAR99656.1| 668|Homo sapiens bestrophin 3 protein. 29 9.1
AK096459-1|BAC04797.1| 668|Homo sapiens protein ( Homo sapiens ... 29 9.1
AF440758-1|AAM76997.1| 398|Homo sapiens vitelliform macular dys... 29 9.1
>BC067751-1|AAH67751.1| 164|Homo sapiens v-maf musculoaponeurotic
fibrosarcoma oncogene homolog F (avian) protein.
Length = 164
Score = 30.7 bits (66), Expect = 4.0
Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Frame = -2
Query: 532 RLISPGRDPSNL*TFAFLINRLFSTPGSGNA-TH*EDPARNSVGC 401
R ++ R P+ L A +I + STPGSG+ H DPA C
Sbjct: 119 RSVAAARGPATLVAPASVITIVKSTPGSGSGPAHGPDPAHGPASC 163
>BC015037-1|AAH15037.1| 164|Homo sapiens v-maf musculoaponeurotic
fibrosarcoma oncogene homolog F (avian) protein.
Length = 164
Score = 30.7 bits (66), Expect = 4.0
Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Frame = -2
Query: 532 RLISPGRDPSNL*TFAFLINRLFSTPGSGNA-TH*EDPARNSVGC 401
R ++ R P+ L A +I + STPGSG+ H DPA C
Sbjct: 119 RSVAAARGPATLVAPASVITIVKSTPGSGSGPAHGPDPAHGPASC 163
>AL021977-2|CAB45266.1| 164|Homo sapiens v-maf musculoaponeurotic
fibrosarcoma oncogene homolog F (avian) protein.
Length = 164
Score = 30.7 bits (66), Expect = 4.0
Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Frame = -2
Query: 532 RLISPGRDPSNL*TFAFLINRLFSTPGSGNA-TH*EDPARNSVGC 401
R ++ R P+ L A +I + STPGSG+ H DPA C
Sbjct: 119 RSVAAARGPATLVAPASVITIVKSTPGSGSGPAHGPDPAHGPASC 163
>AK002001-1|BAA92029.1| 164|Homo sapiens protein ( Homo sapiens
cDNA FLJ11139 fis, clone PLACE1006482, highly similar to
TRANSCRIPTION FACTOR MAFF. ).
Length = 164
Score = 30.7 bits (66), Expect = 4.0
Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Frame = -2
Query: 532 RLISPGRDPSNL*TFAFLINRLFSTPGSGNA-TH*EDPARNSVGC 401
R ++ R P+ L A +I + STPGSG+ H DPA C
Sbjct: 119 RSVAAARGPATLVAPASVITIVKSTPGSGSGPAHGPDPAHGPASC 163
>AJ010857-1|CAB52435.1| 164|Homo sapiens MAFF protein protein.
Length = 164
Score = 30.7 bits (66), Expect = 4.0
Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Frame = -2
Query: 532 RLISPGRDPSNL*TFAFLINRLFSTPGSGNA-TH*EDPARNSVGC 401
R ++ R P+ L A +I + STPGSG+ H DPA C
Sbjct: 119 RSVAAARGPATLVAPASVITIVKSTPGSGSGPAHGPDPAHGPASC 163
>AB025247-1|BAA86871.1| 164|Homo sapiens Maf-related DNA binding
protein protein.
Length = 164
Score = 30.7 bits (66), Expect = 4.0
Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Frame = -2
Query: 532 RLISPGRDPSNL*TFAFLINRLFSTPGSGNA-TH*EDPARNSVGC 401
R ++ R P+ L A +I + STPGSG+ H DPA C
Sbjct: 119 RSVAAARGPATLVAPASVITIVKSTPGSGSGPAHGPDPAHGPASC 163
>AY515706-1|AAR99656.1| 668|Homo sapiens bestrophin 3 protein.
Length = 668
Score = 29.5 bits (63), Expect = 9.1
Identities = 16/56 (28%), Positives = 24/56 (42%)
Frame = -3
Query: 312 HR*WIGRTLNYVFRATSTVYHSVHRIEYDTFFFA*MVGRAHRPPGVKWLLEPIDIY 145
+R W Y + VY V + TFFFA ++GR P + +D+Y
Sbjct: 217 YRSWCSLLFGYDWVGIPLVYTQVVTLAVYTFFFACLIGRQFLDPTKGYAGHDLDLY 272
>AK096459-1|BAC04797.1| 668|Homo sapiens protein ( Homo sapiens
cDNA FLJ39140 fis, clone NTONG2009233, moderately
similar to BESTROPHIN. ).
Length = 668
Score = 29.5 bits (63), Expect = 9.1
Identities = 16/56 (28%), Positives = 24/56 (42%)
Frame = -3
Query: 312 HR*WIGRTLNYVFRATSTVYHSVHRIEYDTFFFA*MVGRAHRPPGVKWLLEPIDIY 145
+R W Y + VY V + TFFFA ++GR P + +D+Y
Sbjct: 217 YRSWCSLLFGYDWVGIPLVYTQVVTLAVYTFFFACLIGRQFLDPTKGYAGHDLDLY 272
>AF440758-1|AAM76997.1| 398|Homo sapiens vitelliform macular
dystrophy 2-like protein 3 protein.
Length = 398
Score = 29.5 bits (63), Expect = 9.1
Identities = 16/56 (28%), Positives = 24/56 (42%)
Frame = -3
Query: 312 HR*WIGRTLNYVFRATSTVYHSVHRIEYDTFFFA*MVGRAHRPPGVKWLLEPIDIY 145
+R W Y + VY V + TFFFA ++GR P + +D+Y
Sbjct: 217 YRSWCSLLFGYDWVGIPLVYTQVVTLAVYTFFFACLIGRQFLDPTKGYAGHDLDLY 272
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 98,559,810
Number of Sequences: 237096
Number of extensions: 2279551
Number of successful extensions: 3571
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 3424
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3571
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6098631048
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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