Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-5961
(541 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L06498-1|AAA60286.1| 119|Homo sapiens ribosomal protein S20 pro... 172 6e-43
BC087850-1|AAH87850.1| 119|Homo sapiens ribosomal protein S20 p... 172 6e-43
BC007507-1|AAH07507.1| 119|Homo sapiens ribosomal protein S20 p... 172 6e-43
AB061842-1|BAB79480.1| 119|Homo sapiens ribosomal protein S20 p... 172 6e-43
AB007156-1|BAA25820.1| 60|Homo sapiens ribosomal protein S20 p... 111 2e-24
BC117211-1|AAI17212.1| 979|Homo sapiens NLRP3 protein protein. 31 2.6
AY422168-1|AAQ98889.1| 977|Homo sapiens cryopyrin deletion 4 is... 31 2.6
AY092033-1|AAM14669.1| 922|Homo sapiens NALP3 intermediate isof... 31 2.6
AY051117-2|AAL12498.1| 920|Homo sapiens cryopyrin protein. 31 2.6
AY051117-1|AAL12497.1| 1034|Homo sapiens cryopyrin protein. 31 2.6
AL606804-11|CAI17155.1| 977|Homo sapiens NLR family, pyrin doma... 31 2.6
AL606804-10|CAI17153.1| 1036|Homo sapiens NLR family, pyrin doma... 31 2.6
AL606804-9|CAI17154.1| 922|Homo sapiens NLR family, pyrin domai... 31 2.6
AF468522-1|AAL78632.1| 1036|Homo sapiens NALP3 long isoform prot... 31 2.6
AF427617-1|AAL33911.1| 920|Homo sapiens cryopyrin protein. 31 2.6
AF420469-1|AAL65136.1| 1034|Homo sapiens PYRIN-containing APAF1-... 31 2.6
AF410477-1|AAL33908.1| 1034|Homo sapiens cryopyrin protein. 31 2.6
AB208891-1|BAD92128.1| 983|Homo sapiens Cryopyrin deletion 4 is... 31 2.6
>L06498-1|AAA60286.1| 119|Homo sapiens ribosomal protein S20
protein.
Length = 119
Score = 172 bits (419), Expect = 6e-43
Identities = 87/117 (74%), Positives = 97/117 (82%)
Frame = -1
Query: 418 SGKNIEKPQAEVSPIPRIRITFTSRNVRSLEKVCADLINGAKKQKLGVKGPVRMPTKILG 239
+GK +P+ + RIRIT TSRNV+SLEKVCADLI GAK++ L VKGPVRMPTK L
Sbjct: 6 TGKTPVEPEVAIH---RIRITLTSRNVKSLEKVCADLIRGAKEKNLKVKGPVRMPTKTLR 62
Query: 238 ITTRKTPCGEGSKTWDRFQMGIPKRVIDLHSPFEIVKQIPSINIEPGVKV*VTIADA 68
ITTRKTPCGEGSKTWDRFQM I KR+IDLHSP EIVKQI SI+IEPGV+V VTIADA
Sbjct: 63 ITTRKTPCGEGSKTWDRFQMRIHKRLIDLHSPSEIVKQITSISIEPGVEVEVTIADA 119
>BC087850-1|AAH87850.1| 119|Homo sapiens ribosomal protein S20
protein.
Length = 119
Score = 172 bits (419), Expect = 6e-43
Identities = 87/117 (74%), Positives = 97/117 (82%)
Frame = -1
Query: 418 SGKNIEKPQAEVSPIPRIRITFTSRNVRSLEKVCADLINGAKKQKLGVKGPVRMPTKILG 239
+GK +P+ + RIRIT TSRNV+SLEKVCADLI GAK++ L VKGPVRMPTK L
Sbjct: 6 TGKTPVEPEVAIH---RIRITLTSRNVKSLEKVCADLIRGAKEKNLKVKGPVRMPTKTLR 62
Query: 238 ITTRKTPCGEGSKTWDRFQMGIPKRVIDLHSPFEIVKQIPSINIEPGVKV*VTIADA 68
ITTRKTPCGEGSKTWDRFQM I KR+IDLHSP EIVKQI SI+IEPGV+V VTIADA
Sbjct: 63 ITTRKTPCGEGSKTWDRFQMRIHKRLIDLHSPSEIVKQITSISIEPGVEVEVTIADA 119
>BC007507-1|AAH07507.1| 119|Homo sapiens ribosomal protein S20
protein.
Length = 119
Score = 172 bits (419), Expect = 6e-43
Identities = 87/117 (74%), Positives = 97/117 (82%)
Frame = -1
Query: 418 SGKNIEKPQAEVSPIPRIRITFTSRNVRSLEKVCADLINGAKKQKLGVKGPVRMPTKILG 239
+GK +P+ + RIRIT TSRNV+SLEKVCADLI GAK++ L VKGPVRMPTK L
Sbjct: 6 TGKTPVEPEVAIH---RIRITLTSRNVKSLEKVCADLIRGAKEKNLKVKGPVRMPTKTLR 62
Query: 238 ITTRKTPCGEGSKTWDRFQMGIPKRVIDLHSPFEIVKQIPSINIEPGVKV*VTIADA 68
ITTRKTPCGEGSKTWDRFQM I KR+IDLHSP EIVKQI SI+IEPGV+V VTIADA
Sbjct: 63 ITTRKTPCGEGSKTWDRFQMRIHKRLIDLHSPSEIVKQITSISIEPGVEVEVTIADA 119
>AB061842-1|BAB79480.1| 119|Homo sapiens ribosomal protein S20
protein.
Length = 119
Score = 172 bits (419), Expect = 6e-43
Identities = 87/117 (74%), Positives = 97/117 (82%)
Frame = -1
Query: 418 SGKNIEKPQAEVSPIPRIRITFTSRNVRSLEKVCADLINGAKKQKLGVKGPVRMPTKILG 239
+GK +P+ + RIRIT TSRNV+SLEKVCADLI GAK++ L VKGPVRMPTK L
Sbjct: 6 TGKTPVEPEVAIH---RIRITLTSRNVKSLEKVCADLIRGAKEKNLKVKGPVRMPTKTLR 62
Query: 238 ITTRKTPCGEGSKTWDRFQMGIPKRVIDLHSPFEIVKQIPSINIEPGVKV*VTIADA 68
ITTRKTPCGEGSKTWDRFQM I KR+IDLHSP EIVKQI SI+IEPGV+V VTIADA
Sbjct: 63 ITTRKTPCGEGSKTWDRFQMRIHKRLIDLHSPSEIVKQITSISIEPGVEVEVTIADA 119
>AB007156-1|BAA25820.1| 60|Homo sapiens ribosomal protein S20
protein.
Length = 60
Score = 111 bits (267), Expect = 2e-24
Identities = 52/60 (86%), Positives = 54/60 (90%)
Frame = -1
Query: 274 KGPVRMPTKILGITTRKTPCGEGSKTWDRFQMGIPKRVIDLHSPFEIVKQIPSINIEPGV 95
KGPVRMPTK L ITTRKTPCGEGSKTWDRFQM I KR+IDLHSP EIVKQI SI+IEPGV
Sbjct: 1 KGPVRMPTKTLRITTRKTPCGEGSKTWDRFQMRIHKRLIDLHSPSEIVKQITSISIEPGV 60
>BC117211-1|AAI17212.1| 979|Homo sapiens NLRP3 protein protein.
Length = 979
Score = 31.1 bits (67), Expect = 2.6
Identities = 17/45 (37%), Positives = 24/45 (53%), Gaps = 4/45 (8%)
Frame = +1
Query: 409 FCLTLQRLPCCLLNSGRNKQLFNQK----LFTAEPEKPHVLVTFE 531
FC L++ C L N G ++ FN + L T + EKP + V FE
Sbjct: 932 FCEVLKQQSCLLQNLGLSEMYFNYETKSALETLQEEKPELTVVFE 976
>AY422168-1|AAQ98889.1| 977|Homo sapiens cryopyrin deletion 4 isoform
protein.
Length = 977
Score = 31.1 bits (67), Expect = 2.6
Identities = 17/45 (37%), Positives = 24/45 (53%), Gaps = 4/45 (8%)
Frame = +1
Query: 409 FCLTLQRLPCCLLNSGRNKQLFNQK----LFTAEPEKPHVLVTFE 531
FC L++ C L N G ++ FN + L T + EKP + V FE
Sbjct: 930 FCEVLKQQSCLLQNLGLSEMYFNYETKSALETLQEEKPELTVVFE 974
>AY092033-1|AAM14669.1| 922|Homo sapiens NALP3 intermediate isoform
protein.
Length = 922
Score = 31.1 bits (67), Expect = 2.6
Identities = 17/45 (37%), Positives = 24/45 (53%), Gaps = 4/45 (8%)
Frame = +1
Query: 409 FCLTLQRLPCCLLNSGRNKQLFNQK----LFTAEPEKPHVLVTFE 531
FC L++ C L N G ++ FN + L T + EKP + V FE
Sbjct: 875 FCEVLKQQSCLLQNLGLSEMYFNYETKSALETLQEEKPELTVVFE 919
>AY051117-2|AAL12498.1| 920|Homo sapiens cryopyrin protein.
Length = 920
Score = 31.1 bits (67), Expect = 2.6
Identities = 17/45 (37%), Positives = 24/45 (53%), Gaps = 4/45 (8%)
Frame = +1
Query: 409 FCLTLQRLPCCLLNSGRNKQLFNQK----LFTAEPEKPHVLVTFE 531
FC L++ C L N G ++ FN + L T + EKP + V FE
Sbjct: 873 FCEVLKQQSCLLQNLGLSEMYFNYETKSALETLQEEKPELTVVFE 917
>AY051117-1|AAL12497.1| 1034|Homo sapiens cryopyrin protein.
Length = 1034
Score = 31.1 bits (67), Expect = 2.6
Identities = 17/45 (37%), Positives = 24/45 (53%), Gaps = 4/45 (8%)
Frame = +1
Query: 409 FCLTLQRLPCCLLNSGRNKQLFNQK----LFTAEPEKPHVLVTFE 531
FC L++ C L N G ++ FN + L T + EKP + V FE
Sbjct: 987 FCEVLKQQSCLLQNLGLSEMYFNYETKSALETLQEEKPELTVVFE 1031
>AL606804-11|CAI17155.1| 977|Homo sapiens NLR family, pyrin domain
containing 3 protein.
Length = 977
Score = 31.1 bits (67), Expect = 2.6
Identities = 17/45 (37%), Positives = 24/45 (53%), Gaps = 4/45 (8%)
Frame = +1
Query: 409 FCLTLQRLPCCLLNSGRNKQLFNQK----LFTAEPEKPHVLVTFE 531
FC L++ C L N G ++ FN + L T + EKP + V FE
Sbjct: 930 FCEVLKQQSCLLQNLGLSEMYFNYETKSALETLQEEKPELTVVFE 974
>AL606804-10|CAI17153.1| 1036|Homo sapiens NLR family, pyrin domain
containing 3 protein.
Length = 1036
Score = 31.1 bits (67), Expect = 2.6
Identities = 17/45 (37%), Positives = 24/45 (53%), Gaps = 4/45 (8%)
Frame = +1
Query: 409 FCLTLQRLPCCLLNSGRNKQLFNQK----LFTAEPEKPHVLVTFE 531
FC L++ C L N G ++ FN + L T + EKP + V FE
Sbjct: 989 FCEVLKQQSCLLQNLGLSEMYFNYETKSALETLQEEKPELTVVFE 1033
>AL606804-9|CAI17154.1| 922|Homo sapiens NLR family, pyrin domain
containing 3 protein.
Length = 922
Score = 31.1 bits (67), Expect = 2.6
Identities = 17/45 (37%), Positives = 24/45 (53%), Gaps = 4/45 (8%)
Frame = +1
Query: 409 FCLTLQRLPCCLLNSGRNKQLFNQK----LFTAEPEKPHVLVTFE 531
FC L++ C L N G ++ FN + L T + EKP + V FE
Sbjct: 875 FCEVLKQQSCLLQNLGLSEMYFNYETKSALETLQEEKPELTVVFE 919
>AF468522-1|AAL78632.1| 1036|Homo sapiens NALP3 long isoform protein.
Length = 1036
Score = 31.1 bits (67), Expect = 2.6
Identities = 17/45 (37%), Positives = 24/45 (53%), Gaps = 4/45 (8%)
Frame = +1
Query: 409 FCLTLQRLPCCLLNSGRNKQLFNQK----LFTAEPEKPHVLVTFE 531
FC L++ C L N G ++ FN + L T + EKP + V FE
Sbjct: 989 FCEVLKQQSCLLQNLGLSEMYFNYETKSALETLQEEKPELTVVFE 1033
>AF427617-1|AAL33911.1| 920|Homo sapiens cryopyrin protein.
Length = 920
Score = 31.1 bits (67), Expect = 2.6
Identities = 17/45 (37%), Positives = 24/45 (53%), Gaps = 4/45 (8%)
Frame = +1
Query: 409 FCLTLQRLPCCLLNSGRNKQLFNQK----LFTAEPEKPHVLVTFE 531
FC L++ C L N G ++ FN + L T + EKP + V FE
Sbjct: 873 FCEVLKQQSCLLQNLGLSEMYFNYETKSALETLQEEKPELTVVFE 917
>AF420469-1|AAL65136.1| 1034|Homo sapiens PYRIN-containing APAF1-like
protein 1 protein.
Length = 1034
Score = 31.1 bits (67), Expect = 2.6
Identities = 17/45 (37%), Positives = 24/45 (53%), Gaps = 4/45 (8%)
Frame = +1
Query: 409 FCLTLQRLPCCLLNSGRNKQLFNQK----LFTAEPEKPHVLVTFE 531
FC L++ C L N G ++ FN + L T + EKP + V FE
Sbjct: 987 FCEVLKQQSCLLQNLGLSEMYFNYETKSALETLQEEKPELTVVFE 1031
>AF410477-1|AAL33908.1| 1034|Homo sapiens cryopyrin protein.
Length = 1034
Score = 31.1 bits (67), Expect = 2.6
Identities = 17/45 (37%), Positives = 24/45 (53%), Gaps = 4/45 (8%)
Frame = +1
Query: 409 FCLTLQRLPCCLLNSGRNKQLFNQK----LFTAEPEKPHVLVTFE 531
FC L++ C L N G ++ FN + L T + EKP + V FE
Sbjct: 987 FCEVLKQQSCLLQNLGLSEMYFNYETKSALETLQEEKPELTVVFE 1031
>AB208891-1|BAD92128.1| 983|Homo sapiens Cryopyrin deletion 4 isoform
variant protein.
Length = 983
Score = 31.1 bits (67), Expect = 2.6
Identities = 17/45 (37%), Positives = 24/45 (53%), Gaps = 4/45 (8%)
Frame = +1
Query: 409 FCLTLQRLPCCLLNSGRNKQLFNQK----LFTAEPEKPHVLVTFE 531
FC L++ C L N G ++ FN + L T + EKP + V FE
Sbjct: 936 FCEVLKQQSCLLQNLGLSEMYFNYETKSALETLQEEKPELTVVFE 980
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 84,391,627
Number of Sequences: 237096
Number of extensions: 2131769
Number of successful extensions: 7520
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 7399
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7520
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5251598958
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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