Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-5960
         (733 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles ...    25   2.4  
AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbona...    25   3.2  
U50474-1|AAA93476.1|   62|Anopheles gambiae protein ( Anopheles ...    24   5.6  
AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein ...    23   7.4  
AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.          23   9.7  
AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.    23   9.7  
AF281078-2|AAF82132.1|  755|Anopheles gambiae vitellogenin 2 pro...    23   9.7  
AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 pro...    23   9.7  

>M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles
            gambiae RT2 retroposon. ).
          Length = 1222

 Score = 25.0 bits (52), Expect = 2.4
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = +2

Query: 476  PDPACPNALRKH 511
            PDP CP+ L++H
Sbjct: 1037 PDPVCPDTLQRH 1048


>AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbonate
           anion exchanger protein.
          Length = 1102

 Score = 24.6 bits (51), Expect = 3.2
 Identities = 19/61 (31%), Positives = 31/61 (50%), Gaps = 5/61 (8%)
 Frame = -3

Query: 668 NPSYSQSLAILHMTIPTCFVLKQFRIS*SIF----QKL*E-CFLHLVLFYVHKMGRICAF 504
           NP++S +LAIL   + T  +    +I+  I      KL + C  HL LF +  + +IC  
Sbjct: 809 NPAWSSALAILPALLGTILIFMDQQITAVIINRKEHKLTKGCGYHLDLFVLACLIQICTM 868

Query: 503 L 501
           +
Sbjct: 869 M 869


>U50474-1|AAA93476.1|   62|Anopheles gambiae protein ( Anopheles
           gambiae putativetrypsin-like enzyme precursor, mRNA,
           partial cds. ).
          Length = 62

 Score = 23.8 bits (49), Expect = 5.6
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = +2

Query: 434 KYYDRFTSRFEDLPPDPACP 493
           ++  R+  R  D+PP PA P
Sbjct: 40  RWIHRYRVRISDVPPTPALP 59


>AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein
           protein.
          Length = 680

 Score = 23.4 bits (48), Expect = 7.4
 Identities = 8/20 (40%), Positives = 10/20 (50%)
 Frame = +2

Query: 476 PDPACPNALRKHRFCPSCER 535
           PD   P    K   CP+C+R
Sbjct: 408 PDYVAPTPKAKTHICPTCKR 427


>AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.
          Length = 1132

 Score = 23.0 bits (47), Expect = 9.7
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = +2

Query: 500 LRKHRFCPSCERKTKRDARNIPK 568
           LRKHR C      T+R+ + + K
Sbjct: 321 LRKHRLCELNREPTEREEQQMQK 343


>AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.
          Length = 1187

 Score = 23.0 bits (47), Expect = 9.7
 Identities = 12/34 (35%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
 Frame = +3

Query: 348 RCQQIGLN-LAGKK*TTNISRMMEELIFIASITT 446
           R   I LN ++G+K   +++R  EEL+   ++TT
Sbjct: 570 RTTMIPLNKISGRKIDPSVARFAEELVGKENVTT 603


>AF281078-2|AAF82132.1|  755|Anopheles gambiae vitellogenin 2
           protein.
          Length = 755

 Score = 23.0 bits (47), Expect = 9.7
 Identities = 10/25 (40%), Positives = 12/25 (48%)
 Frame = +2

Query: 14  NLKWIGEPVKADATKIYYEKVEIDG 88
           NLKW   P  +    IYY K  + G
Sbjct: 113 NLKWQPMPFSSKPFGIYYNKGAVKG 137


>AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1
           protein.
          Length = 2051

 Score = 23.0 bits (47), Expect = 9.7
 Identities = 10/25 (40%), Positives = 12/25 (48%)
 Frame = +2

Query: 14  NLKWIGEPVKADATKIYYEKVEIDG 88
           NLKW   P  +    IYY K  + G
Sbjct: 113 NLKWQPMPFSSKPFGIYYNKGAVKG 137


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 719,192
Number of Sequences: 2352
Number of extensions: 13934
Number of successful extensions: 21
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 74844540
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)