Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-5958
         (729 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_04_0329 + 16726501-16726750,16726843-16726930,16727280-167273...    31   0.94 
03_01_0272 + 2105579-2105671,2105779-2105882,2106006-2107014,210...    29   3.8  

>09_04_0329 +
           16726501-16726750,16726843-16726930,16727280-16727333,
           16727590-16727739,16727884-16728015,16728279-16728423,
           16728514-16728552,16728638-16728712,16728935-16728994,
           16729120-16729184,16729519-16729609,16729806-16729820
          Length = 387

 Score = 31.1 bits (67), Expect = 0.94
 Identities = 21/72 (29%), Positives = 38/72 (52%), Gaps = 5/72 (6%)
 Frame = -1

Query: 495 IKLESFYANKSSSRFIFYCLDA-----SSQPTWC*VVTGAHRHLQRKCATHLET*VLKSQ 331
           I+    + +K  SRF++   DA      S+P++  V+ G  R L  +C++ L T  L+++
Sbjct: 155 IEERDIFISKLESRFLYLAADARSIIRGSRPSYRNVLLGVRRELGVRCSSKLCTADLEAE 214

Query: 330 V*LKRLPRPSNR 295
           + L  L   S+R
Sbjct: 215 IFLHLLDEYSSR 226


>03_01_0272 +
           2105579-2105671,2105779-2105882,2106006-2107014,
           2107130-2107153
          Length = 409

 Score = 29.1 bits (62), Expect = 3.8
 Identities = 11/25 (44%), Positives = 17/25 (68%)
 Frame = +2

Query: 11  WLLVHKCSRSEAVPYVRWHYTSCAY 85
           W+L   C++SEA P +   Y++CAY
Sbjct: 119 WMLAPDCAKSEAFP-LNHRYSNCAY 142


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,491,729
Number of Sequences: 37544
Number of extensions: 383552
Number of successful extensions: 680
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 670
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 680
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1909952136
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)