Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-5957
         (770 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_06_0766 - 27115441-27115760,27115878-27116025,27116213-271174...    28   9.5  
06_01_0187 + 1458802-1458895,1459004-1459464,1459551-1459648,146...    28   9.5  

>11_06_0766 -
           27115441-27115760,27115878-27116025,27116213-27117417,
           27117510-27117753,27120181-27120357
          Length = 697

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 10/25 (40%), Positives = 17/25 (68%)
 Frame = -1

Query: 713 TRRLCYIQVGRQRVCLTYLRENSNR 639
           T  LCY  +G++ V L +LR++ N+
Sbjct: 310 TLSLCYYAIGQKEVALNFLRKSLNK 334


>06_01_0187 +
           1458802-1458895,1459004-1459464,1459551-1459648,
           1460918-1461487,1461534-1461822,1461904-1462086,
           1462204-1462824
          Length = 771

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 12/39 (30%), Positives = 19/39 (48%)
 Frame = +2

Query: 620 LVYKLLVYLSFPLGKLSTRADDQPGCNIIDVYISNVRAP 736
           L   L ++ + P+G ++   +  PG NII  YI     P
Sbjct: 483 LACALAIFFTLPIGIVTATTNQTPGLNIITEYIMGYLYP 521


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,943,547
Number of Sequences: 37544
Number of extensions: 375186
Number of successful extensions: 628
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 609
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 628
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2075009728
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)