Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-5957
         (770 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X66601-1|CAA47167.1|  394|Drosophila melanogaster ornithine deca...    29   9.3  
X66599-1|CAA47165.1|  394|Drosophila melanogaster ornithine  dec...    29   9.3  
AY094710-1|AAM11063.1|  394|Drosophila melanogaster GH13851p pro...    29   9.3  
AE013599-568|AAF59150.1|  394|Drosophila melanogaster CG8721-PA ...    29   9.3  

>X66601-1|CAA47167.1|  394|Drosophila melanogaster ornithine
           decarboxylase protein.
          Length = 394

 Score = 28.7 bits (61), Expect = 9.3
 Identities = 9/18 (50%), Positives = 14/18 (77%)
 Frame = +2

Query: 44  HYGTGCAELQSYDPTVSR 97
           H G+GC+ELQ+YD  + +
Sbjct: 191 HVGSGCSELQAYDRAIKK 208


>X66599-1|CAA47165.1|  394|Drosophila melanogaster ornithine
           decarboxylase protein.
          Length = 394

 Score = 28.7 bits (61), Expect = 9.3
 Identities = 9/18 (50%), Positives = 14/18 (77%)
 Frame = +2

Query: 44  HYGTGCAELQSYDPTVSR 97
           H G+GC+ELQ+YD  + +
Sbjct: 191 HVGSGCSELQAYDRAIKK 208


>AY094710-1|AAM11063.1|  394|Drosophila melanogaster GH13851p
           protein.
          Length = 394

 Score = 28.7 bits (61), Expect = 9.3
 Identities = 9/18 (50%), Positives = 14/18 (77%)
 Frame = +2

Query: 44  HYGTGCAELQSYDPTVSR 97
           H G+GC+ELQ+YD  + +
Sbjct: 191 HVGSGCSELQAYDRAIKK 208


>AE013599-568|AAF59150.1|  394|Drosophila melanogaster CG8721-PA
           protein.
          Length = 394

 Score = 28.7 bits (61), Expect = 9.3
 Identities = 9/18 (50%), Positives = 14/18 (77%)
 Frame = +2

Query: 44  HYGTGCAELQSYDPTVSR 97
           H G+GC+ELQ+YD  + +
Sbjct: 191 HVGSGCSELQAYDRAIKK 208


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,488,031
Number of Sequences: 53049
Number of extensions: 655190
Number of successful extensions: 1236
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1233
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1236
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3561257073
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)