Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-5946
         (769 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subu...    24   4.5  
DQ219483-1|ABB29887.1|  961|Anopheles gambiae cryptochrome 2 pro...    24   5.9  
DQ219482-1|ABB29886.1|  545|Anopheles gambiae cryptochrome 1 pro...    24   5.9  
AY745209-1|AAU93476.1|  167|Anopheles gambiae cytochrome P450 pr...    23   7.9  
AB090812-1|BAC57899.1|  541|Anopheles gambiae gag-like protein p...    23   7.9  

>AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subunit
           protein.
          Length = 837

 Score = 24.2 bits (50), Expect = 4.5
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = -2

Query: 600 WCCLPVQTHKRCY 562
           WC +P  TH RC+
Sbjct: 53  WCTMPNFTHPRCH 65


>DQ219483-1|ABB29887.1|  961|Anopheles gambiae cryptochrome 2
           protein.
          Length = 961

 Score = 23.8 bits (49), Expect = 5.9
 Identities = 8/12 (66%), Positives = 10/12 (83%), Gaps = 1/12 (8%)
 Frame = -3

Query: 464 WIHHLIRH-ISC 432
           WIHHL RH ++C
Sbjct: 352 WIHHLARHAVAC 363


>DQ219482-1|ABB29886.1|  545|Anopheles gambiae cryptochrome 1
           protein.
          Length = 545

 Score = 23.8 bits (49), Expect = 5.9
 Identities = 11/33 (33%), Positives = 21/33 (63%)
 Frame = -3

Query: 464 WIHHLIRHISCS*PIRPRGLRCKFEPHLIYYLQ 366
           W+HH++R+I+ +   R  GL   +E  L ++L+
Sbjct: 372 WLHHILRNITATFLTR-GGLWLSWEEGLQHFLK 403


>AY745209-1|AAU93476.1|  167|Anopheles gambiae cytochrome P450
           protein.
          Length = 167

 Score = 23.4 bits (48), Expect = 7.9
 Identities = 10/25 (40%), Positives = 16/25 (64%)
 Frame = +3

Query: 111 ERYWTRVKIWSPRRDQPLRCLAVKR 185
           ERYW+  K ++P R+   R L ++R
Sbjct: 71  ERYWSEPKRFNPSRENE-RTLQIER 94


>AB090812-1|BAC57899.1|  541|Anopheles gambiae gag-like protein
           protein.
          Length = 541

 Score = 23.4 bits (48), Expect = 7.9
 Identities = 15/61 (24%), Positives = 24/61 (39%)
 Frame = -3

Query: 605 RGGAAYPCRLTRGATTTCSDISFVHH*SSQTTTYIRIGSCPRI*TVCWIHHLIRHISCS* 426
           RG  A+ CR +      C       H +   ++Y++  +C          H I H+SC  
Sbjct: 483 RGHLAHACRSSTDRQQLCIRCGSEGHKARDCSSYVKCAACGG-------PHRIGHMSCEH 535

Query: 425 P 423
           P
Sbjct: 536 P 536


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 774,072
Number of Sequences: 2352
Number of extensions: 15994
Number of successful extensions: 23
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 79834176
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)