Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-5941
         (762 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF038604-1|AAB92011.4|  436|Caenorhabditis elegans Hypothetical ...    34   0.13 
Z92815-4|CAB07294.2| 2175|Caenorhabditis elegans Hypothetical pr...    33   0.22 
Z46791-5|CAA86755.2|  948|Caenorhabditis elegans Hypothetical pr...    31   0.68 
Z46267-15|CAI79255.1| 1100|Caenorhabditis elegans Hypothetical p...    31   0.89 
Z46267-14|CAI79254.1| 1030|Caenorhabditis elegans Hypothetical p...    31   0.89 
Z46267-13|CAH04746.1|  845|Caenorhabditis elegans Hypothetical p...    31   0.89 
Z46267-9|CAA86427.2|  889|Caenorhabditis elegans Hypothetical pr...    31   0.89 
Z46267-8|CAA86424.2| 1030|Caenorhabditis elegans Hypothetical pr...    31   0.89 
Z46267-7|CAA86429.2|  947|Caenorhabditis elegans Hypothetical pr...    31   0.89 
Z46267-6|CAA86428.2| 1215|Caenorhabditis elegans Hypothetical pr...    31   0.89 
Z81541-1|CAB04411.1| 1291|Caenorhabditis elegans Hypothetical pr...    30   1.6  
Z81128-1|CAB03398.1|  568|Caenorhabditis elegans Hypothetical pr...    30   2.1  
AF013953-1|AAC47750.1|  568|Caenorhabditis elegans mom-5 protein.      30   2.1  
AC024808-1|AAK29927.1|  309|Caenorhabditis elegans Hypothetical ...    28   6.3  
Z78543-5|CAH10796.1| 1453|Caenorhabditis elegans Hypothetical pr...    28   8.3  
Z78543-4|CAB01754.1| 1785|Caenorhabditis elegans Hypothetical pr...    28   8.3  
Z78543-3|CAB01755.2|  772|Caenorhabditis elegans Hypothetical pr...    28   8.3  
Z50756-4|CAA90639.1|  482|Caenorhabditis elegans Hypothetical pr...    28   8.3  
Z50741-5|CAA90612.1|  482|Caenorhabditis elegans Hypothetical pr...    28   8.3  

>AF038604-1|AAB92011.4|  436|Caenorhabditis elegans Hypothetical
           protein B0546.2 protein.
          Length = 436

 Score = 33.9 bits (74), Expect = 0.13
 Identities = 20/82 (24%), Positives = 37/82 (45%), Gaps = 2/82 (2%)
 Frame = +1

Query: 190 QNIDSPLLYLKPSAPHKNHGDF-ILSLSTPRAENEYEIYDDAPSTTIAPKP-PTLTSWDE 363
           +N ++ +   +    H NH +   +S    R    Y+ Y D P   + P+P P  T+  +
Sbjct: 186 ENFENYIQRKREENVHGNHVELQAISEMFARPVEVYQ-YSDEPINVLLPRPEPEATALTD 244

Query: 364 SRTDYSHSLSPPAEEPVKSNKP 429
                S++  PP+  P++ N P
Sbjct: 245 GSASTSNAAPPPSTVPIQQNPP 266


>Z92815-4|CAB07294.2| 2175|Caenorhabditis elegans Hypothetical
           protein W01F3.3 protein.
          Length = 2175

 Score = 33.1 bits (72), Expect = 0.22
 Identities = 13/41 (31%), Positives = 23/41 (56%)
 Frame = +1

Query: 292 YEIYDDAPSTTIAPKPPTLTSWDESRTDYSHSLSPPAEEPV 414
           Y+ +  +P+TT   +PPT T+ ++ +    H L   AE P+
Sbjct: 155 YQYHYTSPTTTTTKRPPTTTTTEDPQPFEFHELQEQAENPI 195


>Z46791-5|CAA86755.2|  948|Caenorhabditis elegans Hypothetical
           protein C09G5.6 protein.
          Length = 948

 Score = 31.5 bits (68), Expect = 0.68
 Identities = 25/96 (26%), Positives = 37/96 (38%), Gaps = 3/96 (3%)
 Frame = +1

Query: 283 ENEYEIYDDAPSTTIAPKPPTL-TSWDESRTDYSHSLSPPAEEPVKSNKPKFVQIIVPYT 459
           E  Y+     PSTT +    T   + DES  D+ +   PP+  P K   P   + I  + 
Sbjct: 83  EGPYQSETTTPSTTTSTAATTTEAAEDESGYDFVNDNGPPSSRPRKPEPPTMPRTIQGFR 142

Query: 460 TLRKEADNDY--PQGTKEWSIISEKEFQPRNIPPHK 561
                A + Y  P G+   +   E     R  PP +
Sbjct: 143 APPPAATSTYRPPHGSNYDNYGREPASSRRPYPPQQ 178


>Z46267-15|CAI79255.1| 1100|Caenorhabditis elegans Hypothetical
           protein F49E2.5j protein.
          Length = 1100

 Score = 31.1 bits (67), Expect = 0.89
 Identities = 21/66 (31%), Positives = 29/66 (43%), Gaps = 1/66 (1%)
 Frame = +1

Query: 271 TPR-AENEYEIYDDAPSTTIAPKPPTLTSWDESRTDYSHSLSPPAEEPVKSNKPKFVQII 447
           TP   E  +E     PST  A  P   +  ++     S S S PA EPVK   P+ V+ +
Sbjct: 710 TPEIVEEVFEKKTITPSTAAAAAPAPGSKKNKKNKKNSESESAPAAEPVKEVTPEIVEEV 769

Query: 448 VPYTTL 465
               T+
Sbjct: 770 FEKKTV 775


>Z46267-14|CAI79254.1| 1030|Caenorhabditis elegans Hypothetical
           protein F49E2.5i protein.
          Length = 1030

 Score = 31.1 bits (67), Expect = 0.89
 Identities = 21/66 (31%), Positives = 29/66 (43%), Gaps = 1/66 (1%)
 Frame = +1

Query: 271 TPR-AENEYEIYDDAPSTTIAPKPPTLTSWDESRTDYSHSLSPPAEEPVKSNKPKFVQII 447
           TP   E  +E     PST  A  P   +  ++     S S S PA EPVK   P+ V+ +
Sbjct: 640 TPEIVEEVFEKKTITPSTAAAAAPAPGSKKNKKNKKNSESESAPAAEPVKEVTPEIVEEV 699

Query: 448 VPYTTL 465
               T+
Sbjct: 700 FEKKTV 705


>Z46267-13|CAH04746.1|  845|Caenorhabditis elegans Hypothetical
           protein F49E2.5h protein.
          Length = 845

 Score = 31.1 bits (67), Expect = 0.89
 Identities = 21/66 (31%), Positives = 29/66 (43%), Gaps = 1/66 (1%)
 Frame = +1

Query: 271 TPR-AENEYEIYDDAPSTTIAPKPPTLTSWDESRTDYSHSLSPPAEEPVKSNKPKFVQII 447
           TP   E  +E     PST  A  P   +  ++     S S S PA EPVK   P+ V+ +
Sbjct: 455 TPEIVEEVFEKKTITPSTAAAAAPAPGSKKNKKNKKNSESESAPAAEPVKEVTPEIVEEV 514

Query: 448 VPYTTL 465
               T+
Sbjct: 515 FEKKTV 520


>Z46267-9|CAA86427.2|  889|Caenorhabditis elegans Hypothetical
           protein F49E2.5d protein.
          Length = 889

 Score = 31.1 bits (67), Expect = 0.89
 Identities = 21/66 (31%), Positives = 29/66 (43%), Gaps = 1/66 (1%)
 Frame = +1

Query: 271 TPR-AENEYEIYDDAPSTTIAPKPPTLTSWDESRTDYSHSLSPPAEEPVKSNKPKFVQII 447
           TP   E  +E     PST  A  P   +  ++     S S S PA EPVK   P+ V+ +
Sbjct: 499 TPEIVEEVFEKKTITPSTAAAAAPAPGSKKNKKNKKNSESESAPAAEPVKEVTPEIVEEV 558

Query: 448 VPYTTL 465
               T+
Sbjct: 559 FEKKTV 564


>Z46267-8|CAA86424.2| 1030|Caenorhabditis elegans Hypothetical
           protein F49E2.5c protein.
          Length = 1030

 Score = 31.1 bits (67), Expect = 0.89
 Identities = 21/66 (31%), Positives = 29/66 (43%), Gaps = 1/66 (1%)
 Frame = +1

Query: 271 TPR-AENEYEIYDDAPSTTIAPKPPTLTSWDESRTDYSHSLSPPAEEPVKSNKPKFVQII 447
           TP   E  +E     PST  A  P   +  ++     S S S PA EPVK   P+ V+ +
Sbjct: 640 TPEIVEEVFEKKTITPSTAAAAAPAPGSKKNKKNKKNSESESAPAAEPVKEVTPEIVEEV 699

Query: 448 VPYTTL 465
               T+
Sbjct: 700 FEKKTV 705


>Z46267-7|CAA86429.2|  947|Caenorhabditis elegans Hypothetical
           protein F49E2.5b protein.
          Length = 947

 Score = 31.1 bits (67), Expect = 0.89
 Identities = 21/66 (31%), Positives = 29/66 (43%), Gaps = 1/66 (1%)
 Frame = +1

Query: 271 TPR-AENEYEIYDDAPSTTIAPKPPTLTSWDESRTDYSHSLSPPAEEPVKSNKPKFVQII 447
           TP   E  +E     PST  A  P   +  ++     S S S PA EPVK   P+ V+ +
Sbjct: 557 TPEIVEEVFEKKTITPSTAAAAAPAPGSKKNKKNKKNSESESAPAAEPVKEVTPEIVEEV 616

Query: 448 VPYTTL 465
               T+
Sbjct: 617 FEKKTV 622


>Z46267-6|CAA86428.2| 1215|Caenorhabditis elegans Hypothetical protein
            F49E2.5a protein.
          Length = 1215

 Score = 31.1 bits (67), Expect = 0.89
 Identities = 21/66 (31%), Positives = 29/66 (43%), Gaps = 1/66 (1%)
 Frame = +1

Query: 271  TPR-AENEYEIYDDAPSTTIAPKPPTLTSWDESRTDYSHSLSPPAEEPVKSNKPKFVQII 447
            TP   E  +E     PST  A  P   +  ++     S S S PA EPVK   P+ V+ +
Sbjct: 825  TPEIVEEVFEKKTITPSTAAAAAPAPGSKKNKKNKKNSESESAPAAEPVKEVTPEIVEEV 884

Query: 448  VPYTTL 465
                T+
Sbjct: 885  FEKKTV 890


>Z81541-1|CAB04411.1| 1291|Caenorhabditis elegans Hypothetical
           protein F48F5.1 protein.
          Length = 1291

 Score = 30.3 bits (65), Expect = 1.6
 Identities = 16/52 (30%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
 Frame = +2

Query: 494 KALKNGL*YLKKNSNQGIFHPIKKAFLPLPNNILHLQQLQK-IRSRRF*KIT 646
           +A +N +  +   SNQ +  P+KK     P  ++ ++QL++ ++S+ F KIT
Sbjct: 212 QASENEMIIVSDLSNQHVLRPLKKFTSGFPLGVVEMEQLEEDVKSQWFLKIT 263


>Z81128-1|CAB03398.1|  568|Caenorhabditis elegans Hypothetical
           protein T23D8.1 protein.
          Length = 568

 Score = 29.9 bits (64), Expect = 2.1
 Identities = 14/34 (41%), Positives = 17/34 (50%)
 Frame = -1

Query: 501 SALGVIVVSFFSQSCVWHDYLNKLWFIRFNWLFG 400
           SAL V+   FF  SC W   L   WF+  N  +G
Sbjct: 310 SALAVVHYFFFMSSCAWWLVLCLAWFLAANLKWG 343


>AF013953-1|AAC47750.1|  568|Caenorhabditis elegans mom-5 protein.
          Length = 568

 Score = 29.9 bits (64), Expect = 2.1
 Identities = 14/34 (41%), Positives = 17/34 (50%)
 Frame = -1

Query: 501 SALGVIVVSFFSQSCVWHDYLNKLWFIRFNWLFG 400
           SAL V+   FF  SC W   L   WF+  N  +G
Sbjct: 310 SALAVVHYFFFMSSCAWWLVLCLAWFLAANLKWG 343


>AC024808-1|AAK29927.1|  309|Caenorhabditis elegans Hypothetical
           protein Y53G8AM.4 protein.
          Length = 309

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 17/62 (27%), Positives = 33/62 (53%), Gaps = 7/62 (11%)
 Frame = -1

Query: 486 IVVSFFSQSCVWHD---YLNKLWFIRFNWLFGRWRQTMTVICSTFIPTC--QSRRL--WS 328
           I+ +F   S ++HD   YLN++WF+ + + F  +   +  +   F+      SRR+  W+
Sbjct: 20  IITTFLPISSIFHDNFEYLNEIWFLVYFYGFCVYSNILYWLYFEFVERADHSSRRILVWT 79

Query: 327 YS 322
           +S
Sbjct: 80  FS 81


>Z78543-5|CAH10796.1| 1453|Caenorhabditis elegans Hypothetical
           protein F29G6.3c protein.
          Length = 1453

 Score = 27.9 bits (59), Expect = 8.3
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = +1

Query: 7   HQHASFESTGVDVGNDINYD 66
           H+H  F S+GV VGN + +D
Sbjct: 52  HEHMEFSSSGVIVGNVVGHD 71


>Z78543-4|CAB01754.1| 1785|Caenorhabditis elegans Hypothetical
           protein F29G6.3b protein.
          Length = 1785

 Score = 27.9 bits (59), Expect = 8.3
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = +1

Query: 7   HQHASFESTGVDVGNDINYD 66
           H+H  F S+GV VGN + +D
Sbjct: 52  HEHMEFSSSGVIVGNVVGHD 71


>Z78543-3|CAB01755.2|  772|Caenorhabditis elegans Hypothetical
           protein F29G6.3a protein.
          Length = 772

 Score = 27.9 bits (59), Expect = 8.3
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = +1

Query: 7   HQHASFESTGVDVGNDINYD 66
           H+H  F S+GV VGN + +D
Sbjct: 52  HEHMEFSSSGVIVGNVVGHD 71


>Z50756-4|CAA90639.1|  482|Caenorhabditis elegans Hypothetical
           protein T08D10.1 protein.
          Length = 482

 Score = 27.9 bits (59), Expect = 8.3
 Identities = 15/56 (26%), Positives = 28/56 (50%)
 Frame = +1

Query: 265 LSTPRAENEYEIYDDAPSTTIAPKPPTLTSWDESRTDYSHSLSPPAEEPVKSNKPK 432
           +S  + +N   I  + PST++A    +  S +ES   ++H++S    EP    K +
Sbjct: 144 VSQSQPQNGSYIQYNEPSTSVASTTTSFYSPNESEPVFTHAISFKPNEPENGQKAR 199


>Z50741-5|CAA90612.1|  482|Caenorhabditis elegans Hypothetical
           protein T08D10.1 protein.
          Length = 482

 Score = 27.9 bits (59), Expect = 8.3
 Identities = 15/56 (26%), Positives = 28/56 (50%)
 Frame = +1

Query: 265 LSTPRAENEYEIYDDAPSTTIAPKPPTLTSWDESRTDYSHSLSPPAEEPVKSNKPK 432
           +S  + +N   I  + PST++A    +  S +ES   ++H++S    EP    K +
Sbjct: 144 VSQSQPQNGSYIQYNEPSTSVASTTTSFYSPNESEPVFTHAISFKPNEPENGQKAR 199


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.310    0.130    0.385 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,225,603
Number of Sequences: 27780
Number of extensions: 385668
Number of successful extensions: 957
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 899
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 957
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1819579054
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.7 bits)