Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-5941
         (762 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ468657-1|ABE02558.1|  322|Apis mellifera 1,4,5-trisphosphate r...    25   1.0  
AF069739-1|AAC63272.2|  690|Apis mellifera translation initiatio...    23   2.3  
AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.                23   2.3  
AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...    23   3.1  
AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    23   4.1  
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          22   7.1  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      22   7.1  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    22   7.1  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    22   7.1  

>DQ468657-1|ABE02558.1|  322|Apis mellifera 1,4,5-trisphosphate
           receptor protein.
          Length = 322

 Score = 24.6 bits (51), Expect = 1.0
 Identities = 24/107 (22%), Positives = 46/107 (42%), Gaps = 5/107 (4%)
 Frame = +1

Query: 145 VKDEDVDKYRT-ENNL----QNIDSPLLYLKPSAPHKNHGDFILSLSTPRAENEYEIYDD 309
           V D DV+ Y+  +++L    Q+++   L++  S   + HG+        + +   E  DD
Sbjct: 171 VSDSDVESYKQIKSDLDVLRQSVEKSELWVYKSKASEEHGN--------KKKKNKEDEDD 222

Query: 310 APSTTIAPKPPTLTSWDESRTDYSHSLSPPAEEPVKSNKPKFVQIIV 450
             +   AP  P L++ D+  +     + PP          K  QI++
Sbjct: 223 GATPRKAP--PQLSTTDKKGSAIDLDIGPPLHADQAEEYKKIQQILI 267


>AF069739-1|AAC63272.2|  690|Apis mellifera translation initiation
           factor 2 protein.
          Length = 690

 Score = 23.4 bits (48), Expect = 2.3
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = -3

Query: 397 VETNYDCNLFYFHPNLS 347
           +ETNY+C L +  P +S
Sbjct: 649 IETNYECGLRFEDPMIS 665


>AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.
          Length = 316

 Score = 23.4 bits (48), Expect = 2.3
 Identities = 12/33 (36%), Positives = 17/33 (51%)
 Frame = -3

Query: 478 QLLFSKLCMARLFEQTLVY*I*LALRQVETNYD 380
           Q+LF KL  A L   T++Y      R ++ N D
Sbjct: 246 QMLFRKLPFAGLHSHTIIYLSAKGHRPIDDNID 278


>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
           kinase foraging protein.
          Length = 678

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 9/31 (29%), Positives = 16/31 (51%), Gaps = 2/31 (6%)
 Frame = +1

Query: 274 PRAENEYEI--YDDAPSTTIAPKPPTLTSWD 360
           PR +N  +   +D+ P  +  P P  ++ WD
Sbjct: 645 PRVQNATDTTNFDEYPPDSDPPPPDDISGWD 675


>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 11/38 (28%), Positives = 21/38 (55%), Gaps = 2/38 (5%)
 Frame = +1

Query: 91  KNSFHNSHNKPSFADL--RGVKDEDVDKYRTENNLQNI 198
           KNS +  + + S  +   +   D D++KY+   NL+N+
Sbjct: 172 KNSDYLDNQEVSMENTENKSCTDSDIEKYKMFCNLENV 209


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 11/39 (28%), Positives = 19/39 (48%)
 Frame = +1

Query: 64  DTGMPLEMNKNSFHNSHNKPSFADLRGVKDEDVDKYRTE 180
           D+G  L  N   +HN +++     L  + + + D Y TE
Sbjct: 339 DSGYILN-NDGKWHNIYSEKGLNILGNIIEGNADSYNTE 376


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 11/39 (28%), Positives = 19/39 (48%)
 Frame = +1

Query: 64  DTGMPLEMNKNSFHNSHNKPSFADLRGVKDEDVDKYRTE 180
           D+G  L  N   +HN +++     L  + + + D Y TE
Sbjct: 339 DSGYILN-NDGKWHNIYSEKGLNILGNIIEGNADSYNTE 376


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 8/27 (29%), Positives = 14/27 (51%)
 Frame = +1

Query: 490 PQGTKEWSIISEKEFQPRNIPPHKESV 570
           P     W+ ++ + +  R+IP HK  V
Sbjct: 628 PSDESHWNDLAMEFYYNRSIPDHKRIV 654


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 8/27 (29%), Positives = 14/27 (51%)
 Frame = +1

Query: 490 PQGTKEWSIISEKEFQPRNIPPHKESV 570
           P     W+ ++ + +  R+IP HK  V
Sbjct: 666 PSDESHWNDLAMEFYYNRSIPDHKRIV 692


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.310    0.130    0.385 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 217,576
Number of Sequences: 438
Number of extensions: 5151
Number of successful extensions: 10
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 23789892
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.7 bits)