Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-5938
(766 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein. 76 6e-14
AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse tran... 76 6e-14
AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p pro... 68 1e-11
M22874-2|AAA28675.1| 916|Drosophila melanogaster protein ( D.me... 66 7e-11
AY089343-1|AAL90081.2| 718|Drosophila melanogaster AT16518p pro... 66 7e-11
AM040243-1|CAJ13339.1| 656|Drosophila melanogaster pol protein ... 65 9e-11
AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein ... 65 9e-11
AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein ... 65 9e-11
AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein ... 65 9e-11
X17551-2|CAA35587.1| 888|Drosophila melanogaster protein ( D.me... 65 1e-10
M17214-2|AAA28508.1| 858|Drosophila melanogaster protein ( D.me... 64 2e-10
U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative rever... 63 3e-10
AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein ... 63 5e-10
AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p pro... 62 6e-10
U02279-1|AAA18301.1| 964|Drosophila melanogaster protein ( Dros... 60 4e-09
AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein ... 60 4e-09
AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein ... 60 4e-09
AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein ... 60 4e-09
AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein ... 60 4e-09
AY060323-1|AAL25362.1| 241|Drosophila melanogaster GH20809p pro... 59 6e-09
AJ278684-2|CAB99192.1| 989|Drosophila melanogaster endonuclease... 59 6e-09
AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown prot... 55 9e-08
AJ302712-2|CAC16871.1| 1227|Drosophila melanogaster pol protein. 54 2e-07
X51968-2|CAA36227.1| 1021|Drosophila melanogaster protein ( Dros... 53 4e-07
M14954-2|AAA70222.2| 1219|Drosophila melanogaster putative ORF2 ... 51 2e-06
X51967-1|CAA36225.1| 1057|Drosophila melanogaster protein ( Dros... 45 1e-04
AY071740-1|AAL49362.1| 184|Drosophila melanogaster RH47344p pro... 38 0.020
AY071503-1|AAL49125.1| 627|Drosophila melanogaster RE55932p pro... 30 4.0
AF007780-1|AAB87384.1| 1518|Drosophila melanogaster CHD3 protein. 30 4.0
AE014296-3147|AAF49162.2| 892|Drosophila melanogaster CG9594-PA... 30 4.0
BT022698-1|AAY55114.1| 206|Drosophila melanogaster IP07194p pro... 29 7.0
AE014297-1177|AAN13481.1| 196|Drosophila melanogaster CG31373-P... 29 7.0
>AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein.
Length = 884
Score = 75.8 bits (178), Expect = 6e-14
Identities = 56/200 (28%), Positives = 93/200 (46%), Gaps = 5/200 (2%)
Frame = +2
Query: 2 FDRVWHRALLSKLPSYGIPEGLCKWIASFLDGRSITVVVDGDCSDTMTINAGVPQGSVLS 181
FD VWH LL KL G P L K + +FL R +V ++ S +NAGVPQGSVL
Sbjct: 614 FDTVWHDGLLHKLKMIGTPIYLIKIVQNFLTHRYFSVNLNSSQSARRILNAGVPQGSVLG 673
Query: 182 PTLFILYINDMLSIDG--MHCYADDSTGDARYIGHQSLSRSVVQERRSKLVSEVENSLGR 355
PTLF ++ +D+ + +ADD+ + S S + + ++E++
Sbjct: 674 PTLFNIFTHDIPQATNCVLSLFADDAA-----VYSAGFSYSEINQSMQSYLNELDI---Y 725
Query: 356 VSKWGELNLVQFNPLKTQVCAFTAKKDPFVMAPQFQGV---SLQPSESIGILGVDISSDV 526
KW ++ NP KT FT ++ P + + + +Q ++I LG+ +
Sbjct: 726 YKKW----KIKINPNKTNAIFFTKRRKPRYLPDRQLRILDSPIQWVDNIRYLGIIFDKKL 781
Query: 527 QFRSHLEGKAKLASKMLGVL 586
F+ H+ +K++ L
Sbjct: 782 TFKYHINNTIMKVNKIICTL 801
>AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse
transcriptase protein.
Length = 832
Score = 75.8 bits (178), Expect = 6e-14
Identities = 56/200 (28%), Positives = 93/200 (46%), Gaps = 5/200 (2%)
Frame = +2
Query: 2 FDRVWHRALLSKLPSYGIPEGLCKWIASFLDGRSITVVVDGDCSDTMTINAGVPQGSVLS 181
FD VWH LL KL G P L K + +FL R +V ++ S +NAGVPQGSVL
Sbjct: 562 FDTVWHDGLLHKLKMIGTPIYLIKIVQNFLTHRYFSVNLNSSQSARRILNAGVPQGSVLG 621
Query: 182 PTLFILYINDMLSIDG--MHCYADDSTGDARYIGHQSLSRSVVQERRSKLVSEVENSLGR 355
PTLF ++ +D+ + +ADD+ + S S + + ++E++
Sbjct: 622 PTLFNIFTHDIPQATNCVLSLFADDAA-----VYSAGFSYSEINQSMQSYLNELDI---Y 673
Query: 356 VSKWGELNLVQFNPLKTQVCAFTAKKDPFVMAPQFQGV---SLQPSESIGILGVDISSDV 526
KW ++ NP KT FT ++ P + + + +Q ++I LG+ +
Sbjct: 674 YKKW----KIKINPNKTNAIFFTKRRKPRYLPDRQLRILDSPIQWVDNIRYLGIIFDKKL 729
Query: 527 QFRSHLEGKAKLASKMLGVL 586
F+ H+ +K++ L
Sbjct: 730 TFKYHINNTIMKVNKIICTL 749
>AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p protein.
Length = 906
Score = 68.1 bits (159), Expect = 1e-11
Identities = 53/187 (28%), Positives = 82/187 (43%), Gaps = 1/187 (0%)
Frame = +2
Query: 2 FDRVWHRALLSKLPSYGIPEGLCKWIASFLDGRSITVVVDGDCSDTMTINAGVPQGSVLS 181
FDRVWH L+SK+ P + S+L+ R V V S + AGVPQGSVL
Sbjct: 590 FDRVWHDGLISKVKKL-FPAPYYGVLKSYLEDRRFMVRVRNSYSIPRVMRAGVPQGSVLG 648
Query: 182 PTLFILYINDMLSIDGMHCYADDSTGDARYIGHQSLSRSVVQERRSKLVSEVENSLGRVS 361
P L+ ++ D+ + H A Y +L S ++ ++ L ++
Sbjct: 649 PLLYSVFTADLPCPNAYHMADPRKALLATYADDIALLYS--SNCCNEAARGLQEYLTTLA 706
Query: 362 KWGELNLVQFNPLKTQVCAFTAKKDPFVMAP-QFQGVSLQPSESIGILGVDISSDVQFRS 538
W + +++ NP KT FT K V AP + +GV L LG+ + + F
Sbjct: 707 AWCKRWILKVNPQKTINPCFTLKTLSPVTAPIELEGVILDQPSQAKYLGITLDKRLTFGP 766
Query: 539 HLEGKAK 559
HL+ +
Sbjct: 767 HLKATTR 773
>M22874-2|AAA28675.1| 916|Drosophila melanogaster protein (
D.melanogaster LINEelement J-1, clone J-1. ).
Length = 916
Score = 65.7 bits (153), Expect = 7e-11
Identities = 54/183 (29%), Positives = 82/183 (44%), Gaps = 2/183 (1%)
Frame = +2
Query: 2 FDRVWHRALLSKLPSYGIPEGLCKWIASFLDGRSITVVVDGDCSDTMTINAGVPQGSVLS 181
FDRVWH LL K P L + SFL+ R+ V VDG S I AGVPQGSVL
Sbjct: 591 FDRVWHPGLLYKAKRL-FPPQLYLVVKSFLEERTFHVSVDGYKSSIKPIAAGVPQGSVLG 649
Query: 182 PTLFILYINDMLSIDGMHCYADDSTGDARYIGHQSLSRSVVQERRSKL--VSEVENSLGR 355
PTL+ ++ +DM + H + + I + +V+ + +S L S ++ L
Sbjct: 650 PTLYSVFASDMPT----HTPVTEVDEEDVLIATYADDTAVLTKSKSILAATSGLQEYLDA 705
Query: 356 VSKWGELNLVQFNPLKTQVCAFTAKKDPFVMAPQFQGVSLQPSESIGILGVDISSDVQFR 535
+W E V+ N K F A + G ++ ++ LG+ + + F
Sbjct: 706 FQQWAENWNVRINAEKCANVTF-ANRTGSCPGVSLNGRLIRHHQAYKYLGITLDRKLTFS 764
Query: 536 SHL 544
H+
Sbjct: 765 RHI 767
>AY089343-1|AAL90081.2| 718|Drosophila melanogaster AT16518p
protein.
Length = 718
Score = 65.7 bits (153), Expect = 7e-11
Identities = 54/183 (29%), Positives = 82/183 (44%), Gaps = 2/183 (1%)
Frame = +2
Query: 2 FDRVWHRALLSKLPSYGIPEGLCKWIASFLDGRSITVVVDGDCSDTMTINAGVPQGSVLS 181
FDRVWH LL K P L + SFL+ R+ V VDG S I AGVPQGSVL
Sbjct: 393 FDRVWHPGLLYKAKRL-FPPQLYLVVKSFLEERTFHVSVDGYKSSIKPIAAGVPQGSVLG 451
Query: 182 PTLFILYINDMLSIDGMHCYADDSTGDARYIGHQSLSRSVVQERRSKL--VSEVENSLGR 355
PTL+ ++ +DM + H + + I + +V+ + +S L S ++ L
Sbjct: 452 PTLYSVFASDMPT----HTPVTEVDEEDVLIATYADDTAVLTKSKSILAATSGLQEYLDA 507
Query: 356 VSKWGELNLVQFNPLKTQVCAFTAKKDPFVMAPQFQGVSLQPSESIGILGVDISSDVQFR 535
+W E V+ N K F A + G ++ ++ LG+ + + F
Sbjct: 508 FQQWAENWNVRINAEKCANVTF-ANRTGSCPGVSLNGRLIRHHQAYKYLGITLDRKLTFS 566
Query: 536 SHL 544
H+
Sbjct: 567 RHI 569
>AM040243-1|CAJ13339.1| 656|Drosophila melanogaster pol protein
protein.
Length = 656
Score = 65.3 bits (152), Expect = 9e-11
Identities = 60/204 (29%), Positives = 91/204 (44%), Gaps = 12/204 (5%)
Frame = +2
Query: 2 FDRVWHRALLSKLPSYGIPEGLCKWIASFLDGRSITVVVDGDCSDTM-TINAGVPQGSVL 178
FDRVWH LL KL S IP L + ++L R+ +V +DG+ + + I AGVPQGS+L
Sbjct: 190 FDRVWHDGLLYKL-SRLIPRYLFDLLENYLSNRTFSVRIDGETTSRIGNIRAGVPQGSIL 248
Query: 179 SPTLFILYINDM---LSIDGMHCYADDSTGDARYIGHQSLSRSVVQERR--SKLVSEV-E 340
P L+ +Y +DM + D M + I +++ R +KL + +
Sbjct: 249 GPVLYSIYSSDMPYPIVKDYMRNISFPDYHPTNIILATYADDTIILSRSKYTKLAINLNQ 308
Query: 341 NSLGRVSKWGELNLVQFNPLKTQVCAFTAKKDP--FVMAPQFQGVSLQPSESIGILGVDI 514
N L +W + + N KT F+ KK+ P G LG+ +
Sbjct: 309 NYLNVFCRWSKKWDIAINAKKTGHILFSLKKEQTNIYTPPLINGQRAAKLNKQRYLGLML 368
Query: 515 SSDVQFRSH---LEGKAKLASKML 577
+ F +H L+GK A K L
Sbjct: 369 DRRLTFCAHMTLLKGKTIAAYKKL 392
>AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 65.3 bits (152), Expect = 9e-11
Identities = 60/204 (29%), Positives = 91/204 (44%), Gaps = 12/204 (5%)
Frame = +2
Query: 2 FDRVWHRALLSKLPSYGIPEGLCKWIASFLDGRSITVVVDGDCSDTM-TINAGVPQGSVL 178
FDRVWH LL KL S IP L + ++L R+ +V +DG+ + + I AGVPQGS+L
Sbjct: 637 FDRVWHDGLLYKL-SRLIPRYLFDLLENYLSNRTFSVRIDGETTSRIGNIRAGVPQGSIL 695
Query: 179 SPTLFILYINDM---LSIDGMHCYADDSTGDARYIGHQSLSRSVVQERR--SKLVSEV-E 340
P L+ +Y +DM + D M + I +++ R +KL + +
Sbjct: 696 GPVLYSIYSSDMPYPIVKDYMRNISFPDYHPTNIILATYADDTIILSRSKYTKLAINLNQ 755
Query: 341 NSLGRVSKWGELNLVQFNPLKTQVCAFTAKKDP--FVMAPQFQGVSLQPSESIGILGVDI 514
N L +W + + N KT F+ KK+ P G LG+ +
Sbjct: 756 NYLNVFCRWSKKWDIAINAKKTGHILFSLKKEQTNIYTPPLINGQRAAKLNKQRYLGLML 815
Query: 515 SSDVQFRSH---LEGKAKLASKML 577
+ F +H L+GK A K L
Sbjct: 816 DRRLTFCAHMTLLKGKTIAAYKKL 839
>AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 65.3 bits (152), Expect = 9e-11
Identities = 60/204 (29%), Positives = 91/204 (44%), Gaps = 12/204 (5%)
Frame = +2
Query: 2 FDRVWHRALLSKLPSYGIPEGLCKWIASFLDGRSITVVVDGDCSDTM-TINAGVPQGSVL 178
FDRVWH LL KL S IP L + ++L R+ +V +DG+ + + I AGVPQGS+L
Sbjct: 637 FDRVWHDGLLYKL-SRLIPRYLFDLLENYLSNRTFSVRIDGETTSRIGNIRAGVPQGSIL 695
Query: 179 SPTLFILYINDM---LSIDGMHCYADDSTGDARYIGHQSLSRSVVQERR--SKLVSEV-E 340
P L+ +Y +DM + D M + I +++ R +KL + +
Sbjct: 696 GPVLYSIYSSDMPYPIVKDYMRNISFPDYHPTNIILATYADDTIILSRSKYTKLAINLNQ 755
Query: 341 NSLGRVSKWGELNLVQFNPLKTQVCAFTAKKDP--FVMAPQFQGVSLQPSESIGILGVDI 514
N L +W + + N KT F+ KK+ P G LG+ +
Sbjct: 756 NYLNVFCRWSKKWDIAINAKKTGHILFSLKKEQTNIYTPPLINGQRAAKLNKQRYLGLML 815
Query: 515 SSDVQFRSH---LEGKAKLASKML 577
+ F +H L+GK A K L
Sbjct: 816 DRRLTFCAHMTLLKGKTIAAYKKL 839
>AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 65.3 bits (152), Expect = 9e-11
Identities = 60/204 (29%), Positives = 91/204 (44%), Gaps = 12/204 (5%)
Frame = +2
Query: 2 FDRVWHRALLSKLPSYGIPEGLCKWIASFLDGRSITVVVDGDCSDTM-TINAGVPQGSVL 178
FDRVWH LL KL S IP L + ++L R+ +V +DG+ + + I AGVPQGS+L
Sbjct: 637 FDRVWHDGLLYKL-SRLIPRYLFDLLENYLSNRTFSVRIDGETTSRIGNIRAGVPQGSIL 695
Query: 179 SPTLFILYINDM---LSIDGMHCYADDSTGDARYIGHQSLSRSVVQERR--SKLVSEV-E 340
P L+ +Y +DM + D M + I +++ R +KL + +
Sbjct: 696 GPVLYSIYSSDMPYPIVKDYMRNISFPDYHPTNIILATYADDTIILSRSKYTKLAINLNQ 755
Query: 341 NSLGRVSKWGELNLVQFNPLKTQVCAFTAKKDP--FVMAPQFQGVSLQPSESIGILGVDI 514
N L +W + + N KT F+ KK+ P G LG+ +
Sbjct: 756 NYLNVFCRWSKKWDIAINAKKTGHILFSLKKEQTNIYTPPLINGQRAAKLNKQRYLGLML 815
Query: 515 SSDVQFRSH---LEGKAKLASKML 577
+ F +H L+GK A K L
Sbjct: 816 DRRLTFCAHMTLLKGKTIAAYKKL 839
>X17551-2|CAA35587.1| 888|Drosophila melanogaster protein (
D.melanogaster white-one mutant DNA with Doc retroposon,
inserted inwhite locuspromoter region. ).
Length = 888
Score = 64.9 bits (151), Expect = 1e-10
Identities = 59/192 (30%), Positives = 85/192 (44%), Gaps = 6/192 (3%)
Frame = +2
Query: 2 FDRVWHRALLSKLPSYGIPEGLCKWIASFLDGRSITVVVDGDCSDTMTINAGVPQGSVLS 181
FDRVW LL K+ +P+ K + S+L R + D S I AGVPQGSVL
Sbjct: 585 FDRVWLDGLLFKIIKL-LPQNTHKLLKSYLYNRVFAIRCDTSTSRDCAIEAGVPQGSVLG 643
Query: 182 PTLFILYINDMLSID---GMHCYADDSTGDARYIGHQSLSRSVVQERRSKLVSEVENSLG 352
P L+ LY D ID +ADD+ LSRS + + L+S L
Sbjct: 644 PILYTLYTAD-FPIDYNLTTSTFADDTA---------ILSRSKCPIKATALLS---RHLT 690
Query: 353 RVSKWGELNLVQFNPLKTQVCAFTAKKD---PFVMAPQFQGVSLQPSESIGILGVDISSD 523
V +W + N K + FT K P V+ + + ++ + LGV +
Sbjct: 691 SVERWLADWRISINVQKCKQVTFTLNKQTCPPLVL----NNICIPQADEVTYLGVHLDRR 746
Query: 524 VQFRSHLEGKAK 559
+ +R H+E K+K
Sbjct: 747 LTWRKHIEAKSK 758
>M17214-2|AAA28508.1| 858|Drosophila melanogaster protein (
D.melanogaster Fw repetitiveelement putative reverse
transcriptase, complete cds,and putative binding protein,
3' end. ).
Length = 858
Score = 64.5 bits (150), Expect = 2e-10
Identities = 53/186 (28%), Positives = 86/186 (46%), Gaps = 2/186 (1%)
Frame = +2
Query: 2 FDRVWHRALLSKLPSYGIPEGLCKWIASFLDGRSITVVVDGDCSDTMTINAGVPQGSVLS 181
FD+VW L+ K+ +PE K + S+L R V + S TI AGVPQGSVL
Sbjct: 587 FDKVWLDGLMFKI-KISLPESTHKLLKSYLYDRKFAVRCNTATSTVHTIEAGVPQGSVLG 645
Query: 182 PTLFILYINDMLSIDGM--HCYADDSTGDARYIGHQSLSRSVVQERRSKLVSEVENSLGR 355
PTL+++Y D+ + + +ADD+ +R SRS +Q +++ L
Sbjct: 646 PTLYLIYTADIPTNSRLTVSTFADDTAILSR-------SRSPIQ-----ATAQLALYLID 693
Query: 356 VSKWGELNLVQFNPLKTQVCAFTAKKDPFVMAPQFQGVSLQPSESIGILGVDISSDVQFR 535
+ KW ++ N K + FT + + L ++ + LGV + + +R
Sbjct: 694 IKKWLSDWRIKVNEQKCKHVTFTLNRQD-CPPLLLNSIPLPKADEVTYLGVHLDRRLTWR 752
Query: 536 SHLEGK 553
H+E K
Sbjct: 753 RHIEAK 758
>U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative reverse
transcriptase protein.
Length = 1084
Score = 63.3 bits (147), Expect = 3e-10
Identities = 62/209 (29%), Positives = 90/209 (43%), Gaps = 8/209 (3%)
Frame = +2
Query: 2 FDRVWHRALLSKLPSYGIPEGLCKWIASFLDGRSITVVVD-GDCSDTMTINAGVPQGSVL 178
FDRVWH LL KL +P L + S+L R+ V G+ S T I AGVPQGS L
Sbjct: 634 FDRVWHEGLLLKLAKI-LPYNLYIILESYLTNRTFEVKDQAGETSRTGQIGAGVPQGSNL 692
Query: 179 SPTLFILYINDMLSIDGMHCYADDSTGDARYIGHQSLSRSVVQERRSKLVS-EVENSLGR 355
P L+ ++ +DM + Y T + + + + + + EN L
Sbjct: 693 GPLLYSIFSSDM---PLPYIYRPSPTERIMLSTYADDTIVLSSDTLATAATRNNENYLKS 749
Query: 356 VSKWGELNLVQFNPLKTQVCAFTAKKD--PFVMAPQFQGVSLQPSESIGILGVDISSDVQ 529
S W + + N KT FT K D + + +G ++ LGV + S +
Sbjct: 750 FSDWADKWGISVNAAKTGHVIFTLKNDLPTSLRTMKIKGQVIKIESKQSYLGVILDSKLT 809
Query: 530 FRSH---LEGKAKLA-SKMLGVLNRAKRV 604
SH L GK A KM +LNR ++
Sbjct: 810 LSSHVTKLMGKYTTAYRKMTWILNRRSKL 838
>AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein
protein.
Length = 1092
Score = 62.9 bits (146), Expect = 5e-10
Identities = 63/218 (28%), Positives = 91/218 (41%), Gaps = 7/218 (3%)
Frame = +2
Query: 2 FDRVWHRALLSKLPSYGIPEGLCKWIASFLDGRSITVVVD-GDCSDTMTINAGVPQGSVL 178
FDRVWH LL KL +P L + S+L R+ V G+ S T I AGVPQGS L
Sbjct: 646 FDRVWHEGLLLKLAKI-LPYNLYIILESYLTNRTFEVKDQAGETSRTGQIGAGVPQGSNL 704
Query: 179 SPTLFILYINDMLSIDGMHCYADDSTGDARYIGHQSLSRSVVQERRSKLVS-EVENSLGR 355
P L+ ++ +DM + Y T + + + + + + EN L
Sbjct: 705 GPLLYSIFSSDM---PLPYIYRPSPTQRIMLSTYADDTIVLSSDTLATAATRNNENYLKT 761
Query: 356 VSKWGELNLVQFNPLKTQVCAFTAKKD--PFVMAPQFQGVSLQPSESIGILGVDISSDVQ 529
S W + + N KT FT K D M + +G +++ LGV + S +
Sbjct: 762 FSDWADKWGISVNAAKTGHVIFTLKNDLPTNSMNVKIKGQTIKKESKQSYLGVTLDSKLT 821
Query: 530 FRSH---LEGKAKLASKMLGVLNRAKRVLHAWTKAFAL 634
SH L GK A + L + + L TK L
Sbjct: 822 LSSHVTKLLGKYSTAYRKLTWILNGRSKLPTKTKILIL 859
>AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p protein.
Length = 888
Score = 62.5 bits (145), Expect = 6e-10
Identities = 58/192 (30%), Positives = 84/192 (43%), Gaps = 6/192 (3%)
Frame = +2
Query: 2 FDRVWHRALLSKLPSYGIPEGLCKWIASFLDGRSITVVVDGDCSDTMTINAGVPQGSVLS 181
FDRVW LL K+ +P+ K + S+L + D S I AGVPQGSVL
Sbjct: 585 FDRVWLDGLLFKIIKL-LPQNTHKLLKSYLYNTVFAIRCDTSTSRDCAIEAGVPQGSVLG 643
Query: 182 PTLFILYINDMLSID---GMHCYADDSTGDARYIGHQSLSRSVVQERRSKLVSEVENSLG 352
P L+ LY D ID +ADD+ LSRS + + L+S L
Sbjct: 644 PILYTLYTAD-FPIDYNLTTSTFADDTA---------ILSRSKCPIKATALLS---RHLT 690
Query: 353 RVSKWGELNLVQFNPLKTQVCAFTAKKD---PFVMAPQFQGVSLQPSESIGILGVDISSD 523
V +W + N K + FT K P V+ + + ++ + LGV +
Sbjct: 691 SVERWLADWRISINVQKCKQVTFTLNKQTCPPLVL----NNICIPQADEVTYLGVHLDRR 746
Query: 524 VQFRSHLEGKAK 559
+ +R H+E K+K
Sbjct: 747 LTWRKHIEAKSK 758
>U02279-1|AAA18301.1| 964|Drosophila melanogaster protein (
Drosophila melanogastertelomere-associated transposons
TART, TART-A and HeT-A,and TART-A ORF2 gene, partial cds.
).
Length = 964
Score = 59.7 bits (138), Expect = 4e-09
Identities = 56/210 (26%), Positives = 87/210 (41%), Gaps = 3/210 (1%)
Frame = +2
Query: 2 FDRVWHRALLSKLPSYGIPEGLCKWIASFLDGRSITVVVD-GDCSDTMTINAGVPQGSVL 178
FDRVWH LL KL +P L + S+L R+ V G+ S I AGVPQGS L
Sbjct: 518 FDRVWHEGLLLKLAKI-LPYNLYIILESYLTNRTFEVKDQAGETSRAGQIGAGVPQGSNL 576
Query: 179 SPTLFILYINDMLSIDGMHCYADDSTGDARYIGHQSLSRSVVQERRSKLVSEVENSLGRV 358
P L+ ++ +DM H + + Y + S + + EN L
Sbjct: 577 GPILYSIFSSDMPLPHIYHPSPTERIMLSTYADDTIVLSSDI--LATAATRNNENYLKTF 634
Query: 359 SKWGELNLVQFNPLKTQVCAFTAKKD--PFVMAPQFQGVSLQPSESIGILGVDISSDVQF 532
S W + + N KT +T K D + + +G +++ LGV + S +
Sbjct: 635 SDWADKWGISVNAAKTGHVIYTLKNDIPTNLKTMKIKGQAIKKESKQSYLGVILDSKLTL 694
Query: 533 RSHLEGKAKLASKMLGVLNRAKRVLHAWTK 622
H+ K+ K L + +L+ +K
Sbjct: 695 SPHV---TKVVGKYLTAYRKMSWILNERSK 721
>AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 59.7 bits (138), Expect = 4e-09
Identities = 56/210 (26%), Positives = 87/210 (41%), Gaps = 3/210 (1%)
Frame = +2
Query: 2 FDRVWHRALLSKLPSYGIPEGLCKWIASFLDGRSITVVVD-GDCSDTMTINAGVPQGSVL 178
FDRVWH LL KL +P L + S+L R+ V G+ S I AGVPQGS L
Sbjct: 634 FDRVWHEGLLLKLAKI-LPYNLYIILESYLTNRTFEVKDQAGETSRAGQIGAGVPQGSNL 692
Query: 179 SPTLFILYINDMLSIDGMHCYADDSTGDARYIGHQSLSRSVVQERRSKLVSEVENSLGRV 358
P L+ ++ +DM H + + Y + S + + EN L
Sbjct: 693 GPILYSIFSSDMPLPHIYHPSPTERIMLSTYADDTIVLSSDI--LATAATRNNENYLKTF 750
Query: 359 SKWGELNLVQFNPLKTQVCAFTAKKD--PFVMAPQFQGVSLQPSESIGILGVDISSDVQF 532
S W + + N KT +T K D + + +G +++ LGV + S +
Sbjct: 751 SDWADKWGISVNAAKTGHVIYTLKNDIPTNLKTMKIKGQAIKKESKQSYLGVILDSKLTL 810
Query: 533 RSHLEGKAKLASKMLGVLNRAKRVLHAWTK 622
H+ K+ K L + +L+ +K
Sbjct: 811 SPHV---TKVVGKYLTAYRKMSWILNERSK 837
>AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 59.7 bits (138), Expect = 4e-09
Identities = 56/210 (26%), Positives = 87/210 (41%), Gaps = 3/210 (1%)
Frame = +2
Query: 2 FDRVWHRALLSKLPSYGIPEGLCKWIASFLDGRSITVVVD-GDCSDTMTINAGVPQGSVL 178
FDRVWH LL KL +P L + S+L R+ V G+ S I AGVPQGS L
Sbjct: 634 FDRVWHEGLLLKLAKI-LPYNLYIILESYLTNRTFEVKDQAGETSRAGQIGAGVPQGSNL 692
Query: 179 SPTLFILYINDMLSIDGMHCYADDSTGDARYIGHQSLSRSVVQERRSKLVSEVENSLGRV 358
P L+ ++ +DM H + + Y + S + + EN L
Sbjct: 693 GPILYSIFSSDMPLPHIYHPSPTERIMLSTYADDTIVLSSDI--LATAATRNNENYLKTF 750
Query: 359 SKWGELNLVQFNPLKTQVCAFTAKKD--PFVMAPQFQGVSLQPSESIGILGVDISSDVQF 532
S W + + N KT +T K D + + +G +++ LGV + S +
Sbjct: 751 SDWADKWGISVNAAKTGHVIYTLKNDIPTNLKTMKIKGQAIKKESKQSYLGVILDSKLTL 810
Query: 533 RSHLEGKAKLASKMLGVLNRAKRVLHAWTK 622
H+ K+ K L + +L+ +K
Sbjct: 811 SPHV---TKVVGKYLTAYRKMSWILNERSK 837
>AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein
protein.
Length = 1042
Score = 59.7 bits (138), Expect = 4e-09
Identities = 56/210 (26%), Positives = 87/210 (41%), Gaps = 3/210 (1%)
Frame = +2
Query: 2 FDRVWHRALLSKLPSYGIPEGLCKWIASFLDGRSITVVVD-GDCSDTMTINAGVPQGSVL 178
FDRVWH LL KL +P L + S+L R+ V G+ S I AGVPQGS L
Sbjct: 596 FDRVWHEGLLLKLAKI-LPYNLYIILESYLTNRTFEVKDQAGETSRAGQIGAGVPQGSNL 654
Query: 179 SPTLFILYINDMLSIDGMHCYADDSTGDARYIGHQSLSRSVVQERRSKLVSEVENSLGRV 358
P L+ ++ +DM H + + Y + S + + EN L
Sbjct: 655 GPILYSIFSSDMPLPHIYHPSPTERIMLSTYADDTIVLSSDI--LATAATRNNENYLKTF 712
Query: 359 SKWGELNLVQFNPLKTQVCAFTAKKD--PFVMAPQFQGVSLQPSESIGILGVDISSDVQF 532
S W + + N KT +T K D + + +G +++ LGV + S +
Sbjct: 713 SDWADKWGISVNAAKTGHVIYTLKNDIPTNLKTMKIKGQAIKKESKQSYLGVILDSKLTL 772
Query: 533 RSHLEGKAKLASKMLGVLNRAKRVLHAWTK 622
H+ K+ K L + +L+ +K
Sbjct: 773 SPHV---TKVVGKYLTAYRKMSWILNERSK 799
>AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 59.7 bits (138), Expect = 4e-09
Identities = 56/210 (26%), Positives = 87/210 (41%), Gaps = 3/210 (1%)
Frame = +2
Query: 2 FDRVWHRALLSKLPSYGIPEGLCKWIASFLDGRSITVVVD-GDCSDTMTINAGVPQGSVL 178
FDRVWH LL KL +P L + S+L R+ V G+ S I AGVPQGS L
Sbjct: 634 FDRVWHEGLLLKLAKI-LPYNLYIILESYLTNRTFEVKDQAGETSRAGQIGAGVPQGSNL 692
Query: 179 SPTLFILYINDMLSIDGMHCYADDSTGDARYIGHQSLSRSVVQERRSKLVSEVENSLGRV 358
P L+ ++ +DM H + + Y + S + + EN L
Sbjct: 693 GPILYSIFSSDMPLPHIYHPSPTERIMLSTYADDTIVLSSDI--LATAATRNNENYLKTF 750
Query: 359 SKWGELNLVQFNPLKTQVCAFTAKKD--PFVMAPQFQGVSLQPSESIGILGVDISSDVQF 532
S W + + N KT +T K D + + +G +++ LGV + S +
Sbjct: 751 SDWADKWGISVNAAKTGHVIYTLKNDIPTNLKTMKIKGQAIKKESKQSYLGVILDSKLTL 810
Query: 533 RSHLEGKAKLASKMLGVLNRAKRVLHAWTK 622
H+ K+ K L + +L+ +K
Sbjct: 811 SPHV---TKVVGKYLTAYRKMSWILNERSK 837
>AY060323-1|AAL25362.1| 241|Drosophila melanogaster GH20809p
protein.
Length = 241
Score = 59.3 bits (137), Expect = 6e-09
Identities = 31/71 (43%), Positives = 40/71 (56%)
Frame = +2
Query: 2 FDRVWHRALLSKLPSYGIPEGLCKWIASFLDGRSITVVVDGDCSDTMTINAGVPQGSVLS 181
FDRVW L+ K+ +P+ + K + S+LD R V S TI AGVPQGSVL
Sbjct: 126 FDRVWLDGLMFKIIQL-LPQNIHKLLKSYLDKRVFAVRCSSSTSSDFTIEAGVPQGSVLG 184
Query: 182 PTLFILYINDM 214
P L+ LY D+
Sbjct: 185 PILYTLYTADI 195
>AJ278684-2|CAB99192.1| 989|Drosophila melanogaster
endonuclease/reverse transcriptase protein.
Length = 989
Score = 59.3 bits (137), Expect = 6e-09
Identities = 47/195 (24%), Positives = 97/195 (49%), Gaps = 6/195 (3%)
Frame = +2
Query: 26 LLSKLPSYGIPEGLCKWIASFLDGRSITVVVDGDCSDTMTINAGVPQGSVLSPTLFILYI 205
+L + + G+P+ + I ++ R + V + D + ++AGVPQGSVL P L+ +
Sbjct: 570 ILGAMRNLGVPDYIRGVIGNYFRDRVLWYVTE-DGPRSHQVSAGVPQGSVLGPILWNIMY 628
Query: 206 NDMLSIDG-----MHCYADDSTGDARYIGHQSLSRSVVQERRSKLVSEVEN-SLGRVSKW 367
+ +LSI +HC+ADD + ++++++ + + ++ N ++ +W
Sbjct: 629 DGILSISKPRGVELHCFADD-------VAITAVAKTIPE------LQDISNVAITAAIEW 675
Query: 368 GELNLVQFNPLKTQVCAFTAKKDPFVMAPQFQGVSLQPSESIGILGVDISSDVQFRSHLE 547
E ++ KT+V +++K M + +GV + +E++ LGV I + F++H
Sbjct: 676 LEKVGLKIAAHKTEVVLLSSRKSVECMRVEVKGVEIASAETLKYLGVLIDRRLSFKAHAR 735
Query: 548 GKAKLASKMLGVLNR 592
+K A+ L R
Sbjct: 736 YASKKAAMTAAALAR 750
>AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown
protein.
Length = 908
Score = 55.2 bits (127), Expect = 9e-08
Identities = 30/71 (42%), Positives = 38/71 (53%)
Frame = +2
Query: 2 FDRVWHRALLSKLPSYGIPEGLCKWIASFLDGRSITVVVDGDCSDTMTINAGVPQGSVLS 181
FDRVWH L K+ +P + S+L+GR V S + AGVPQGSVL
Sbjct: 589 FDRVWHIGLQLKIKQT-LPAPYFGLLKSYLEGRRFAVRFHSAISTEHNVAAGVPQGSVLG 647
Query: 182 PTLFILYINDM 214
P L+ LY +DM
Sbjct: 648 PLLYCLYSHDM 658
>AJ302712-2|CAC16871.1| 1227|Drosophila melanogaster pol protein.
Length = 1227
Score = 54.4 bits (125), Expect = 2e-07
Identities = 47/184 (25%), Positives = 83/184 (45%), Gaps = 2/184 (1%)
Frame = +2
Query: 2 FDRVWHRALLSKLPSYGIPEGLCKWIASFLDGRSITVVVDGDCSDTMTINAGVPQGSVLS 181
FDRV A+L +L +GI L I +F+ RS V ++ S++ ++ G+PQGS LS
Sbjct: 589 FDRVGIHAVLCRLERWGIGPRLYNLIKAFMTNRSFRVRINNVTSNSHILHNGIPQGSPLS 648
Query: 182 PTLFILYINDMLSIDGMH--CYADDSTGDARYIGHQSLSRSVVQERRSKLVSEVENSLGR 355
LF++ I D+ I H Y DA I + + + V+E+ +++ E
Sbjct: 649 VVLFMIAIEDINDIVTRHKDIYISLYADDA-IIFTKIKNINTVREKFLEILQE------- 700
Query: 356 VSKWGELNLVQFNPLKTQVCAFTAKKDPFVMAPQFQGVSLQPSESIGILGVDISSDVQFR 535
++ WG + K Q K+ + F +++ + ILG+ + F+
Sbjct: 701 INSWGATSGASLAIEKCQTLHICRKQRCNLSDIVFNSRTIKDVNFLKILGITFDPKLLFK 760
Query: 536 SHLE 547
H +
Sbjct: 761 QHCQ 764
>X51968-2|CAA36227.1| 1021|Drosophila melanogaster protein (
Drosophila melanogasterDNA for type I retrotransposable
element R1Dm. ).
Length = 1021
Score = 53.2 bits (122), Expect = 4e-07
Identities = 58/207 (28%), Positives = 93/207 (44%), Gaps = 3/207 (1%)
Frame = +2
Query: 2 FDRVWHRALLSKLPSYGIPEGLCKWIASFLDGRSITVVVDGDCSDTMTINAGVPQGSVLS 181
FD V A LS+L G E + W SF GR V+ + + + G PQGS+
Sbjct: 583 FDNVEWSAALSRLADLGCRE-MGLW-QSFFSGRR-AVIRSSSGTVEVPVTRGCPQGSISG 639
Query: 182 PTLFILYINDMLSIDGMHCYADDSTGDARYIGHQSLSRSVVQERRSKLVSEVENSLGRVS 361
P ++ + ++ +L +C D + + SR+V++E+ ++L+S VE
Sbjct: 640 PFIWDILMDVLLQRLQPYCQLSAYADDLLLL-VEGNSRAVLEEKGAQLMSIVET------ 692
Query: 362 KWG-ELNLVQFNPLKTQVCAFTAKKDPFVMAP--QFQGVSLQPSESIGILGVDISSDVQF 532
WG E+ + L T K AP +F G +L S LG+ +S ++F
Sbjct: 693 -WGAEVG----DCLSTSKTVIMLLKGALRRAPTVRFAGRNLPYVRSCRYLGITVSEGMKF 747
Query: 533 RSHLEGKAKLASKMLGVLNRAKRVLHA 613
+H+ A L +M GV+ RVL A
Sbjct: 748 LTHI---ASLRQRMTGVVGALARVLRA 771
>M14954-2|AAA70222.2| 1219|Drosophila melanogaster putative ORF2
protein.
Length = 1219
Score = 51.2 bits (117), Expect = 2e-06
Identities = 29/89 (32%), Positives = 47/89 (52%), Gaps = 6/89 (6%)
Frame = +2
Query: 2 FDRVWHRALLSKLPSYGIPEGLCKWIASFLDGRSITVVVDGDCSDTMTINAGVPQGSVLS 181
FDRV +++ +L + + K+I +F+ R ITV V S + + G+PQGS +S
Sbjct: 581 FDRVGVHSIIQQLQEWKTGPKIIKYIKNFMSNRKITVRVGPHTSSPLPLFNGIPQGSPIS 640
Query: 182 PTLFILYINDMLSIDGMH------CYADD 250
LF++ N + +I +H YADD
Sbjct: 641 VILFLIAFNKLSNIISLHKEIKFNAYADD 669
>X51967-1|CAA36225.1| 1057|Drosophila melanogaster protein (
Drosophila melanogasterDNA for type II retrotransposable
element R2Dm. ).
Length = 1057
Score = 44.8 bits (101), Expect = 1e-04
Identities = 23/72 (31%), Positives = 38/72 (52%)
Frame = +2
Query: 2 FDRVWHRALLSKLPSYGIPEGLCKWIASFLDGRSITVVVDGDCSDTMTINAGVPQGSVLS 181
FD + H ++ L +YG P+G ++ + +G ++ DG S+ GV QG LS
Sbjct: 487 FDSLSHASIYDTLRAYGAPKGFVDYVQNTYEGGGTSLNGDGWSSEEFVPARGVKQGDPLS 546
Query: 182 PTLFILYINDML 217
P LF L ++ +L
Sbjct: 547 PILFNLVMDRLL 558
>AY071740-1|AAL49362.1| 184|Drosophila melanogaster RH47344p
protein.
Length = 184
Score = 37.5 bits (83), Expect = 0.020
Identities = 32/144 (22%), Positives = 60/144 (41%), Gaps = 1/144 (0%)
Frame = +2
Query: 146 INAGVPQGSVLSPTLFILYINDMLSIDGMHCYADDSTGDARYIGH-QSLSRSVVQERRSK 322
+ GVPQGSVL P L+ + +L + G + +G ++ VV + K
Sbjct: 47 VTGGVPQGSVLGPLLWNTMYDGILRL--------PLVGRSEIVGFADDVALLVVDKYPGK 98
Query: 323 LVSEVENSLGRVSKWGELNLVQFNPLKTQVCAFTAKKDPFVMAPQFQGVSLQPSESIGIL 502
++ + W ++ P KT+ +++K + G + S +I L
Sbjct: 99 AEEMCNRNIRAIEHWLSSMGLELAPEKTKAVLISSRKAVETATVEVGGTLVSSSRAIKYL 158
Query: 503 GVDISSDVQFRSHLEGKAKLASKM 574
V I + + FR HL + A+++
Sbjct: 159 EVMIDTRLSFREHLAYASSKATEV 182
>AY071503-1|AAL49125.1| 627|Drosophila melanogaster RE55932p
protein.
Length = 627
Score = 29.9 bits (64), Expect = 4.0
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = -3
Query: 749 DNPNGPPLYEVKWKKLVFGEPRPQRWEQYSHARPXL 642
+ PNG +Y VKW++L + + WE+ S + P L
Sbjct: 189 EEPNGGTMYLVKWRELSYND---SSWERESDSIPGL 221
>AF007780-1|AAB87384.1| 1518|Drosophila melanogaster CHD3 protein.
Length = 1518
Score = 29.9 bits (64), Expect = 4.0
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = -3
Query: 749 DNPNGPPLYEVKWKKLVFGEPRPQRWEQYSHARPXL 642
+ PNG +Y VKW++L + + WE+ S + P L
Sbjct: 192 EEPNGGTMYLVKWRELSYND---SSWERESDSIPGL 224
>AE014296-3147|AAF49162.2| 892|Drosophila melanogaster CG9594-PA
protein.
Length = 892
Score = 29.9 bits (64), Expect = 4.0
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = -3
Query: 749 DNPNGPPLYEVKWKKLVFGEPRPQRWEQYSHARPXL 642
+ PNG +Y VKW++L + + WE+ S + P L
Sbjct: 189 EEPNGGTMYLVKWRELSYND---SSWERESDSIPGL 221
>BT022698-1|AAY55114.1| 206|Drosophila melanogaster IP07194p
protein.
Length = 206
Score = 29.1 bits (62), Expect = 7.0
Identities = 14/40 (35%), Positives = 23/40 (57%)
Frame = -1
Query: 559 LGFAFQMTPKLDIARNVDPKYPNTLGRLQGYSLELRRHDK 440
L A + P+L+I + K+P ++GYS E+ R+DK
Sbjct: 100 LPLAVFINPELEIISSQVNKHPEGCMSVRGYSAEVERYDK 139
>AE014297-1177|AAN13481.1| 196|Drosophila melanogaster CG31373-PA
protein.
Length = 196
Score = 29.1 bits (62), Expect = 7.0
Identities = 14/40 (35%), Positives = 23/40 (57%)
Frame = -1
Query: 559 LGFAFQMTPKLDIARNVDPKYPNTLGRLQGYSLELRRHDK 440
L A + P+L+I + K+P ++GYS E+ R+DK
Sbjct: 90 LPLAVFINPELEIISSQVNKHPEGCMSVRGYSAEVERYDK 129
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 40,271,952
Number of Sequences: 53049
Number of extensions: 980365
Number of successful extensions: 2740
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 2443
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2720
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3520086471
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -