BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-5932
(693 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein. 25 3.0
AY062197-1|AAL58558.1| 150|Anopheles gambiae cytochrome P450 CY... 23 9.1
>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
Length = 3320
Score = 24.6 bits (51), Expect = 3.0
Identities = 7/22 (31%), Positives = 16/22 (72%)
Frame = +1
Query: 55 KYNKTDVVFVLNEFRLFSRCIK 120
++NK + +NE+R+ S+C++
Sbjct: 3299 QFNKASSMATINEYRVCSKCVQ 3320
>AY062197-1|AAL58558.1| 150|Anopheles gambiae cytochrome P450
CYP4C27 protein.
Length = 150
Score = 23.0 bits (47), Expect = 9.1
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = +1
Query: 85 LNEFRLFSRCIKVVIAL 135
LNE +L RCIK + L
Sbjct: 55 LNELKLLERCIKEALRL 71
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 622,024
Number of Sequences: 2352
Number of extensions: 11657
Number of successful extensions: 13
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 70250040
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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