Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-5927
         (724 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             27   0.14 
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    27   0.18 
AB013287-1|BAA87893.1|  190|Apis mellifera calmodulin kinase II ...    25   0.72 
S76956-1|AAB33931.1|  168|Apis mellifera olfactory receptor prot...    23   2.9  
X72575-1|CAA51167.1|  168|Apis mellifera Apidaecin precursor pro...    22   5.1  
AM420631-1|CAM06631.1|  153|Apis mellifera bursicon subunit alph...    22   5.1  
AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.    22   6.7  
AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.     21   8.9  

>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 27.5 bits (58), Expect = 0.14
 Identities = 16/64 (25%), Positives = 25/64 (39%)
 Frame = +1

Query: 19  PFVVKTPKTGDLRRDVNTQPSDSSSAHQELRLPQSPHSRRIKARH*QSSHSKPASQPQQD 198
           P V++   + D R   +     S   HQ+L   QS H +       Q    +   QPQQ 
Sbjct: 785 PEVMRRLMSEDKRLSKSVNGDQSQPPHQQLHHHQSTHPQAQAQAQPQQQQQQQQQQPQQQ 844

Query: 199 HRSR 210
            + +
Sbjct: 845 QQQQ 848



 Score = 24.6 bits (51), Expect = 0.96
 Identities = 22/108 (20%), Positives = 40/108 (37%), Gaps = 1/108 (0%)
 Frame = +1

Query: 76   PSDSSSAHQELRLPQSPHSRRIKARH*QSSHSKPASQPQQDHRSRLTALPGPTARNFTAS 255
            P+D  SA     +      +  + +  Q    +   QPQQ  +      P P  +     
Sbjct: 1480 PTDKKSACDSKLIVDHSSQKTQQQQPQQQQQQQQQQQPQQQSQQPQQQQPQPQQQQQQQQ 1539

Query: 256  SRRNSSSQPTTGSSTLGVTHLRRG-SSAHMDYWRHARSIQAQSRLTAD 396
             ++    Q   G+ +  V  L+RG +S +      A S Q Q + + +
Sbjct: 1540 QQQPQQQQKEYGAVSGLVVQLQRGYNSGNNRSGEQANSQQQQQQQSGE 1587


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 27.1 bits (57), Expect = 0.18
 Identities = 14/48 (29%), Positives = 20/48 (41%)
 Frame = +1

Query: 223 PGPTARNFTASSRRNSSSQPTTGSSTLGVTHLRRGSSAHMDYWRHARS 366
           P P  R  +A S   SSS P  G++  G    R G   +    +  +S
Sbjct: 511 PSPNPRIASAPSSSTSSSPPAKGAAAAGQPSKRNGGETNKQELKRLKS 558


>AB013287-1|BAA87893.1|  190|Apis mellifera calmodulin kinase II
           protein.
          Length = 190

 Score = 25.0 bits (52), Expect = 0.72
 Identities = 10/25 (40%), Positives = 13/25 (52%)
 Frame = +2

Query: 254 HHAATVHRSPRPDHQRLGSHISGVA 328
           HH   VHR  +P++  L S   G A
Sbjct: 26  HHNGVVHRDLKPENLLLASKAKGAA 50


>S76956-1|AAB33931.1|  168|Apis mellifera olfactory receptor
           protein.
          Length = 168

 Score = 23.0 bits (47), Expect = 2.9
 Identities = 13/53 (24%), Positives = 26/53 (49%)
 Frame = -2

Query: 531 RLKVVSFLISVVRAEISLQGPVLLEACGESRLSLNAACVSPVLLEVCGESRLS 373
           +L V  ++I ++           L  CG + ++     +SP+L  VC ++RL+
Sbjct: 22  QLVVGPYVIGLMNTMTHTTNAFCLPFCGPNVINPFFCDMSPLLSLVCADTRLN 74


>X72575-1|CAA51167.1|  168|Apis mellifera Apidaecin precursor
           protein.
          Length = 168

 Score = 22.2 bits (45), Expect = 5.1
 Identities = 10/47 (21%), Positives = 22/47 (46%)
 Frame = +1

Query: 52  LRRDVNTQPSDSSSAHQELRLPQSPHSRRIKARH*QSSHSKPASQPQ 192
           LRR+  ++    ++    +  P+ PH R  +    +  +++P   PQ
Sbjct: 88  LRREAESEAEPGNNRPVYIPQPRPPHPRLRREPEAEPGNNRPVYIPQ 134


>AM420631-1|CAM06631.1|  153|Apis mellifera bursicon subunit alpha
           protein precursor protein.
          Length = 153

 Score = 22.2 bits (45), Expect = 5.1
 Identities = 10/30 (33%), Positives = 14/30 (46%)
 Frame = -3

Query: 482 ACKGQCCSKPAVSRG*A*MLRACRQCCSKS 393
           AC+G+C S   VS      +     CC +S
Sbjct: 52  ACRGRCSSYLQVSGSKIWQMERSCMCCQES 81


>AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.
          Length = 615

 Score = 21.8 bits (44), Expect = 6.7
 Identities = 7/16 (43%), Positives = 9/16 (56%)
 Frame = +2

Query: 254 HHAATVHRSPRPDHQR 301
           HH    HR  R D++R
Sbjct: 156 HHGMAYHRGHRKDYER 171


>AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.
          Length = 602

 Score = 21.4 bits (43), Expect = 8.9
 Identities = 8/31 (25%), Positives = 15/31 (48%)
 Frame = +2

Query: 254 HHAATVHRSPRPDHQRLGSHISGVAALHTWT 346
           ++ A +   P P +    SHI    ++ T+T
Sbjct: 429 YNPALIQSQPSPQYPSTSSHILQQPSIRTYT 459


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 199,905
Number of Sequences: 438
Number of extensions: 4198
Number of successful extensions: 18
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22413960
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)