Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-5921
(384 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ328860-1|ABC61090.1| 127|Homo sapiens immunoglobulin heavy ch... 31 0.96
AL513320-1|CAI14334.1| 1229|Homo sapiens multiple EGF-like-domai... 30 2.2
AL512413-3|CAH70834.1| 1229|Homo sapiens multiple EGF-like-domai... 30 2.2
AB231860-1|BAE19678.1| 1640|Homo sapiens hypothetical protein pr... 30 2.2
AB011539-1|BAA32467.2| 1246|Homo sapiens MEGF6 protein. 30 2.2
AF538685-1|AAN15137.1| 3526|Homo sapiens ALFY protein. 29 3.9
AC095046-1|AAY40903.1| 2407|Homo sapiens unknown protein. 29 3.9
U47004-2|AAB19039.1| 1690|Homo sapiens collagen type IV a6 chain... 28 8.9
U47004-1|AAB19038.1| 1691|Homo sapiens collagen type IV a6 chain... 28 8.9
U04845-1|AAA19569.2| 1691|Homo sapiens A type IV collagen protein. 28 8.9
L22763-1|AAA16338.1| 542|Homo sapiens alpha-6 type IV collagen ... 28 8.9
D63562-1|BAA09791.1| 1600|Homo sapiens a6(IV) collagen protein. 28 8.9
D21337-1|BAA04809.1| 1678|Homo sapiens collagen protein. 28 8.9
AL136080-2|CAI40758.1| 1691|Homo sapiens collagen type IV alpha ... 28 8.9
AL136080-1|CAI40756.1| 1690|Homo sapiens collagen type IV alpha ... 28 8.9
AL109943-2|CAI42995.1| 1691|Homo sapiens collagen type IV alpha ... 28 8.9
AL109943-1|CAI42993.1| 1690|Homo sapiens collagen type IV alpha ... 28 8.9
AL034369-3|CAI42047.1| 1691|Homo sapiens collagen type IV alpha ... 28 8.9
AL034369-2|CAI42045.1| 1690|Homo sapiens collagen type IV alpha ... 28 8.9
AL031177-13|CAI43140.1| 1691|Homo sapiens collagen type IV alpha... 28 8.9
AL031177-12|CAI43139.1| 1690|Homo sapiens collagen type IV alpha... 28 8.9
>DQ328860-1|ABC61090.1| 127|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 127
Score = 31.5 bits (68), Expect = 0.96
Identities = 13/21 (61%), Positives = 15/21 (71%)
Frame = -1
Query: 123 VVRWFARRSGRTNVWGSGTTL 61
VV W AR SG +VWG GTT+
Sbjct: 103 VVVWLARVSGGMDVWGQGTTV 123
>AL513320-1|CAI14334.1| 1229|Homo sapiens multiple EGF-like-domains 6
protein.
Length = 1229
Score = 30.3 bits (65), Expect = 2.2
Identities = 16/39 (41%), Positives = 19/39 (48%)
Frame = +1
Query: 235 LAGARNGPRGNPSTRTCSSPPIKAGVMHCGMDCTQARGG 351
+ G G +P T TC PP +AGV C C Q R G
Sbjct: 1026 VCGCGQGAACDPVTGTCLCPPGRAGV-RCERGCPQNRFG 1063
>AL512413-3|CAH70834.1| 1229|Homo sapiens multiple EGF-like-domains 6
protein.
Length = 1229
Score = 30.3 bits (65), Expect = 2.2
Identities = 16/39 (41%), Positives = 19/39 (48%)
Frame = +1
Query: 235 LAGARNGPRGNPSTRTCSSPPIKAGVMHCGMDCTQARGG 351
+ G G +P T TC PP +AGV C C Q R G
Sbjct: 1026 VCGCGQGAACDPVTGTCLCPPGRAGV-RCERGCPQNRFG 1063
>AB231860-1|BAE19678.1| 1640|Homo sapiens hypothetical protein
protein.
Length = 1640
Score = 30.3 bits (65), Expect = 2.2
Identities = 16/39 (41%), Positives = 19/39 (48%)
Frame = +1
Query: 235 LAGARNGPRGNPSTRTCSSPPIKAGVMHCGMDCTQARGG 351
+ G G +P T TC PP +AGV C C Q R G
Sbjct: 1336 VCGCGQGAACDPVTGTCLCPPGRAGV-RCERGCPQNRFG 1373
>AB011539-1|BAA32467.2| 1246|Homo sapiens MEGF6 protein.
Length = 1246
Score = 30.3 bits (65), Expect = 2.2
Identities = 16/39 (41%), Positives = 19/39 (48%)
Frame = +1
Query: 235 LAGARNGPRGNPSTRTCSSPPIKAGVMHCGMDCTQARGG 351
+ G G +P T TC PP +AGV C C Q R G
Sbjct: 1043 VCGCGQGAACDPVTGTCLCPPGRAGV-RCERGCPQNRFG 1080
>AF538685-1|AAN15137.1| 3526|Homo sapiens ALFY protein.
Length = 3526
Score = 29.5 bits (63), Expect = 3.9
Identities = 13/27 (48%), Positives = 19/27 (70%), Gaps = 2/27 (7%)
Frame = -1
Query: 222 PHDAPTRNLVT--IVDRRLPASIGSGQ 148
PH+APT N VT ++D + + IGSG+
Sbjct: 1065 PHNAPTNNTVTTGLIDGAVVSGIGSGE 1091
>AC095046-1|AAY40903.1| 2407|Homo sapiens unknown protein.
Length = 2407
Score = 29.5 bits (63), Expect = 3.9
Identities = 13/27 (48%), Positives = 19/27 (70%), Gaps = 2/27 (7%)
Frame = -1
Query: 222 PHDAPTRNLVT--IVDRRLPASIGSGQ 148
PH+APT N VT ++D + + IGSG+
Sbjct: 1065 PHNAPTNNTVTTGLIDGAVVSGIGSGE 1091
>U47004-2|AAB19039.1| 1690|Homo sapiens collagen type IV a6 chain
protein.
Length = 1690
Score = 28.3 bits (60), Expect = 8.9
Identities = 11/28 (39%), Positives = 12/28 (42%)
Frame = +1
Query: 31 KGLKISEFIVQCSAGAPNVGPTRSPSKP 114
KG+K C G PN GP P P
Sbjct: 472 KGIKGDSGFCACDGGVPNTGPPGEPGPP 499
>U47004-1|AAB19038.1| 1691|Homo sapiens collagen type IV a6 chain
protein.
Length = 1691
Score = 28.3 bits (60), Expect = 8.9
Identities = 11/28 (39%), Positives = 12/28 (42%)
Frame = +1
Query: 31 KGLKISEFIVQCSAGAPNVGPTRSPSKP 114
KG+K C G PN GP P P
Sbjct: 473 KGIKGDSGFCACDGGVPNTGPPGEPGPP 500
>U04845-1|AAA19569.2| 1691|Homo sapiens A type IV collagen protein.
Length = 1691
Score = 28.3 bits (60), Expect = 8.9
Identities = 11/28 (39%), Positives = 12/28 (42%)
Frame = +1
Query: 31 KGLKISEFIVQCSAGAPNVGPTRSPSKP 114
KG+K C G PN GP P P
Sbjct: 473 KGIKGDSGFCACDGGVPNTGPPGEPGPP 500
>L22763-1|AAA16338.1| 542|Homo sapiens alpha-6 type IV collagen
protein.
Length = 542
Score = 28.3 bits (60), Expect = 8.9
Identities = 11/28 (39%), Positives = 12/28 (42%)
Frame = +1
Query: 31 KGLKISEFIVQCSAGAPNVGPTRSPSKP 114
KG+K C G PN GP P P
Sbjct: 473 KGIKGDSGFCACDGGVPNTGPPGEPGPP 500
>D63562-1|BAA09791.1| 1600|Homo sapiens a6(IV) collagen protein.
Length = 1600
Score = 28.3 bits (60), Expect = 8.9
Identities = 11/28 (39%), Positives = 12/28 (42%)
Frame = +1
Query: 31 KGLKISEFIVQCSAGAPNVGPTRSPSKP 114
KG+K C G PN GP P P
Sbjct: 468 KGIKGDSGFCACDGGVPNTGPPGEPGPP 495
>D21337-1|BAA04809.1| 1678|Homo sapiens collagen protein.
Length = 1678
Score = 28.3 bits (60), Expect = 8.9
Identities = 11/28 (39%), Positives = 12/28 (42%)
Frame = +1
Query: 31 KGLKISEFIVQCSAGAPNVGPTRSPSKP 114
KG+K C G PN GP P P
Sbjct: 472 KGIKGDSGFCACDGGVPNTGPPGEPGPP 499
>AL136080-2|CAI40758.1| 1691|Homo sapiens collagen type IV alpha 6
protein.
Length = 1691
Score = 28.3 bits (60), Expect = 8.9
Identities = 11/28 (39%), Positives = 12/28 (42%)
Frame = +1
Query: 31 KGLKISEFIVQCSAGAPNVGPTRSPSKP 114
KG+K C G PN GP P P
Sbjct: 473 KGIKGDSGFCACDGGVPNTGPPGEPGPP 500
>AL136080-1|CAI40756.1| 1690|Homo sapiens collagen type IV alpha 6
protein.
Length = 1690
Score = 28.3 bits (60), Expect = 8.9
Identities = 11/28 (39%), Positives = 12/28 (42%)
Frame = +1
Query: 31 KGLKISEFIVQCSAGAPNVGPTRSPSKP 114
KG+K C G PN GP P P
Sbjct: 472 KGIKGDSGFCACDGGVPNTGPPGEPGPP 499
>AL109943-2|CAI42995.1| 1691|Homo sapiens collagen type IV alpha 6
protein.
Length = 1691
Score = 28.3 bits (60), Expect = 8.9
Identities = 11/28 (39%), Positives = 12/28 (42%)
Frame = +1
Query: 31 KGLKISEFIVQCSAGAPNVGPTRSPSKP 114
KG+K C G PN GP P P
Sbjct: 473 KGIKGDSGFCACDGGVPNTGPPGEPGPP 500
>AL109943-1|CAI42993.1| 1690|Homo sapiens collagen type IV alpha 6
protein.
Length = 1690
Score = 28.3 bits (60), Expect = 8.9
Identities = 11/28 (39%), Positives = 12/28 (42%)
Frame = +1
Query: 31 KGLKISEFIVQCSAGAPNVGPTRSPSKP 114
KG+K C G PN GP P P
Sbjct: 472 KGIKGDSGFCACDGGVPNTGPPGEPGPP 499
>AL034369-3|CAI42047.1| 1691|Homo sapiens collagen type IV alpha 6
protein.
Length = 1691
Score = 28.3 bits (60), Expect = 8.9
Identities = 11/28 (39%), Positives = 12/28 (42%)
Frame = +1
Query: 31 KGLKISEFIVQCSAGAPNVGPTRSPSKP 114
KG+K C G PN GP P P
Sbjct: 473 KGIKGDSGFCACDGGVPNTGPPGEPGPP 500
>AL034369-2|CAI42045.1| 1690|Homo sapiens collagen type IV alpha 6
protein.
Length = 1690
Score = 28.3 bits (60), Expect = 8.9
Identities = 11/28 (39%), Positives = 12/28 (42%)
Frame = +1
Query: 31 KGLKISEFIVQCSAGAPNVGPTRSPSKP 114
KG+K C G PN GP P P
Sbjct: 472 KGIKGDSGFCACDGGVPNTGPPGEPGPP 499
>AL031177-13|CAI43140.1| 1691|Homo sapiens collagen type IV alpha 6
protein.
Length = 1691
Score = 28.3 bits (60), Expect = 8.9
Identities = 11/28 (39%), Positives = 12/28 (42%)
Frame = +1
Query: 31 KGLKISEFIVQCSAGAPNVGPTRSPSKP 114
KG+K C G PN GP P P
Sbjct: 473 KGIKGDSGFCACDGGVPNTGPPGEPGPP 500
>AL031177-12|CAI43139.1| 1690|Homo sapiens collagen type IV alpha 6
protein.
Length = 1690
Score = 28.3 bits (60), Expect = 8.9
Identities = 11/28 (39%), Positives = 12/28 (42%)
Frame = +1
Query: 31 KGLKISEFIVQCSAGAPNVGPTRSPSKP 114
KG+K C G PN GP P P
Sbjct: 472 KGIKGDSGFCACDGGVPNTGPPGEPGPP 499
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 65,550,974
Number of Sequences: 237096
Number of extensions: 1409368
Number of successful extensions: 4159
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 3988
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4159
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 2583773550
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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