Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-5918
(540 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 25 0.37
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 22 3.5
DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex det... 22 3.5
DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex det... 22 3.5
DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex det... 22 3.5
DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex det... 22 3.5
DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex det... 22 3.5
DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex det... 22 3.5
DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex det... 22 3.5
DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex det... 22 3.5
DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex det... 22 3.5
AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex det... 22 3.5
AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex det... 22 3.5
DQ435328-1|ABD92643.1| 143|Apis mellifera OBP11 protein. 21 8.1
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 25.4 bits (53), Expect = 0.37
Identities = 8/20 (40%), Positives = 14/20 (70%)
Frame = -3
Query: 508 YTYPINCFNYEHKSWLASIK 449
++Y +NC NY+H + L +K
Sbjct: 29 FSYLLNCKNYDHPTTLLKLK 48
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 22.2 bits (45), Expect = 3.5
Identities = 6/19 (31%), Positives = 13/19 (68%)
Frame = +2
Query: 386 TDFCILMTYYPCVVVLCIS 442
T + ++ Y PCV+++ +S
Sbjct: 244 TGYFLIQVYVPCVLIVVLS 262
>DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 22.2 bits (45), Expect = 3.5
Identities = 8/12 (66%), Positives = 10/12 (83%)
Frame = +1
Query: 487 NSLSGMYNFNHN 522
NSLS YN+N+N
Sbjct: 86 NSLSNNYNYNNN 97
>DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 3.5
Identities = 8/12 (66%), Positives = 10/12 (83%)
Frame = +1
Query: 487 NSLSGMYNFNHN 522
NSLS YN+N+N
Sbjct: 86 NSLSNNYNYNNN 97
>DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 3.5
Identities = 8/12 (66%), Positives = 10/12 (83%)
Frame = +1
Query: 487 NSLSGMYNFNHN 522
NSLS YN+N+N
Sbjct: 86 NSLSNNYNYNNN 97
>DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 3.5
Identities = 8/12 (66%), Positives = 10/12 (83%)
Frame = +1
Query: 487 NSLSGMYNFNHN 522
NSLS YN+N+N
Sbjct: 86 NSLSNNYNYNNN 97
>DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 3.5
Identities = 8/12 (66%), Positives = 10/12 (83%)
Frame = +1
Query: 487 NSLSGMYNFNHN 522
NSLS YN+N+N
Sbjct: 86 NSLSNNYNYNNN 97
>DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 3.5
Identities = 8/12 (66%), Positives = 10/12 (83%)
Frame = +1
Query: 487 NSLSGMYNFNHN 522
NSLS YN+N+N
Sbjct: 86 NSLSNNYNYNNN 97
>DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 3.5
Identities = 8/12 (66%), Positives = 10/12 (83%)
Frame = +1
Query: 487 NSLSGMYNFNHN 522
NSLS YN+N+N
Sbjct: 86 NSLSNNYNYNNN 97
>DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 3.5
Identities = 8/12 (66%), Positives = 10/12 (83%)
Frame = +1
Query: 487 NSLSGMYNFNHN 522
NSLS YN+N+N
Sbjct: 86 NSLSNNYNYNNN 97
>DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 3.5
Identities = 8/12 (66%), Positives = 10/12 (83%)
Frame = +1
Query: 487 NSLSGMYNFNHN 522
NSLS YN+N+N
Sbjct: 86 NSLSNNYNYNNN 97
>AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 22.2 bits (45), Expect = 3.5
Identities = 8/12 (66%), Positives = 10/12 (83%)
Frame = +1
Query: 487 NSLSGMYNFNHN 522
NSLS YN+N+N
Sbjct: 319 NSLSNNYNYNNN 330
>AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 22.2 bits (45), Expect = 3.5
Identities = 8/12 (66%), Positives = 10/12 (83%)
Frame = +1
Query: 487 NSLSGMYNFNHN 522
NSLS YN+N+N
Sbjct: 319 NSLSNNYNYNNN 330
>DQ435328-1|ABD92643.1| 143|Apis mellifera OBP11 protein.
Length = 143
Score = 21.0 bits (42), Expect = 8.1
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = -1
Query: 258 FNYNLPEYNIIDKLNKK 208
FN L ++N++DK N K
Sbjct: 72 FNCVLEKFNVMDKKNGK 88
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 138,261
Number of Sequences: 438
Number of extensions: 2736
Number of successful extensions: 17
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 15336375
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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