Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-5911
(811 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09_04_0537 + 18410201-18410207,18410301-18410586,18410674-184107... 35 0.088
06_03_0709 - 23759162-23759455,23759681-23759761,23759847-237599... 34 0.15
08_02_1133 + 24554037-24554043,24554524-24554797,24554890-245549... 32 0.47
09_02_0102 - 4295329-4295366,4295622-4295702,4295946-4296252,429... 31 0.82
05_04_0369 - 20691100-20691235,20691318-20691488,20691540-206919... 31 0.82
03_06_0483 - 34226496-34226864,34227140-34227360,34227677-342279... 31 1.1
06_01_0175 - 1371089-1371706,1371812-1371994,1372069-1372324,137... 31 1.4
02_01_0263 + 1743661-1743694,1744939-1745236,1745318-1745417,174... 30 2.5
12_02_0095 + 13559997-13560232,13561295-13561683,13562092-135623... 29 3.3
11_04_0383 - 17004520-17005150,17005205-17005327,17005641-17007142 29 3.3
04_01_0369 + 4840371-4841294,4841921-4842559 29 4.4
01_01_0245 + 2013821-2014171,2014278-2014671,2015158-2015289,201... 29 4.4
02_03_0205 - 16411707-16412759,16413077-16413256,16413960-164144... 29 5.8
06_01_1079 + 8832779-8833960 28 7.6
03_01_0549 - 4102098-4102198,4102394-4102544,4102629-4102760,410... 28 7.6
>09_04_0537 +
18410201-18410207,18410301-18410586,18410674-18410773,
18410881-18411147,18411286-18411363,18411444-18411545,
18411628-18411677,18411793-18411889,18412248-18412361,
18412495-18412666,18412865-18413217,18413812-18413898,
18413981-18414001
Length = 577
Score = 34.7 bits (76), Expect = 0.088
Identities = 53/222 (23%), Positives = 92/222 (41%), Gaps = 18/222 (8%)
Frame = +1
Query: 151 EDVNTRAQDLA--AIKEWLRKQPHLPDEWEDACLMT-FLRGCSFSLEKCKKKLDMYFTMR 321
EDV ++LA A ++ L LPD+ +D +M FL+ F EK + M+ M
Sbjct: 62 EDVRDAEEELAVAAFRDRLAVHALLPDKHDDYHMMLRFLKARKFDSEKA---MQMWAEML 118
Query: 322 AACPEFFAN---RDVTRPELMDLLNRAQGPTLPGLTPQGRRVTIARA----LDKNLDTNQ 480
EF A+ + EL D+L R G+ +GR V I R +K +
Sbjct: 119 RWRKEFGADTILEEFEFDELDDVL-RYYPQGYHGVDREGRPVYIERLGKVYPNKLMQITS 177
Query: 481 LNDVFKLAMMIGDVRLREEVEG--------IAGDVYVLDASILMPSHLAKISPAVLKKFF 636
++ K + + RE I +LD + + +K + ++ +
Sbjct: 178 VDRYIKYHVQEFERAFRERFPACTLAAKRHIDSTTTILDVHGVGLKNFSKTARELVHRMQ 237
Query: 637 ICIQEAYPVKLKEIHVINASPLVDVVFNIVKPFLKEKMKKRV 762
+ YP L +++V+NA +++N VK FL K ++
Sbjct: 238 KIDSDYYPETLHQMYVVNAGSGFKLIWNSVKGFLDPKTSSKI 279
>06_03_0709 -
23759162-23759455,23759681-23759761,23759847-23759948,
23760068-23760163,23760256-23760315,23760496-23760549,
23760657-23760695,23761102-23761179,23761476-23761529,
23761797-23761880,23763447-23763475,23763602-23763659
Length = 342
Score = 33.9 bits (74), Expect = 0.15
Identities = 13/42 (30%), Positives = 24/42 (57%)
Frame = +1
Query: 655 YPVKLKEIHVINASPLVDVVFNIVKPFLKEKMKKRVFFHXRC 780
YP K + +++NA + + +VKP L+E+ +K+V C
Sbjct: 197 YPEKAETYYIVNAPYIFSACWKVVKPLLQERTRKKVHVLHGC 238
>08_02_1133 +
24554037-24554043,24554524-24554797,24554890-24554989,
24555089-24555355,24555455-24555532,24555616-24555717,
24555798-24555847,24555916-24556051,24556374-24556490,
24556659-24556818,24557450-24557811,24558075-24558152,
24558274-24558294
Length = 583
Score = 32.3 bits (70), Expect = 0.47
Identities = 51/222 (22%), Positives = 93/222 (41%), Gaps = 18/222 (8%)
Frame = +1
Query: 151 EDVNTRAQD--LAAIKEWLRKQPHLPDEWEDACLMT-FLRGCSFSLEKCKKKLDMYFTMR 321
EDV ++ +AA + L LPD+ +D +M FL+ F +++ + M+ M
Sbjct: 58 EDVRDAEEERAVAAFHDRLAAHGLLPDKHDDYHMMLRFLKARKFDIDRA---MQMWADML 114
Query: 322 AACPEFFAN---RDVTRPELMDLLNRAQGPTLPGLTPQGRRVTIARA--LDKN--LDTNQ 480
EF A+ +D EL ++L R G+ +GR V I R +D N +
Sbjct: 115 KWREEFGADTILQDFDFHELDEVL-RYYPQGYHGVDREGRPVYIERLGKVDPNKLMQITS 173
Query: 481 LNDVFKLAMMIGDVRLREEVEG--------IAGDVYVLDASILMPSHLAKISPAVLKKFF 636
++ K + + RE I +LD + + +K + ++ +
Sbjct: 174 VDRYIKYHVQEFERAFRERFPACTLAAKRHIDSTTTILDVQGVGFKNFSKTARELINRMQ 233
Query: 637 ICIQEAYPVKLKEIHVINASPLVDVVFNIVKPFLKEKMKKRV 762
+ YP L ++ V+NA +++N VK FL K ++
Sbjct: 234 KIDSDYYPETLHQMFVVNAGSGFKLIWNSVKGFLDPKTSSKI 275
>09_02_0102 -
4295329-4295366,4295622-4295702,4295946-4296252,
4296616-4296696,4296818-4296919,4297358-4297396,
4297453-4297548,4297624-4297683,4297942-4297995,
4298230-4298307,4298577-4298630,4298705-4298788,
4300457-4300485,4300666-4300720
Length = 385
Score = 31.5 bits (68), Expect = 0.82
Identities = 11/36 (30%), Positives = 22/36 (61%)
Frame = +1
Query: 655 YPVKLKEIHVINASPLVDVVFNIVKPFLKEKMKKRV 762
YP K + ++NA + + +VKP L+E+ K+++
Sbjct: 196 YPEKTETYFIVNAPYVFSACWKVVKPLLQERTKRKI 231
>05_04_0369 -
20691100-20691235,20691318-20691488,20691540-20691940,
20692084-20692452,20692540-20692986,20693065-20693772
Length = 743
Score = 31.5 bits (68), Expect = 0.82
Identities = 23/78 (29%), Positives = 37/78 (47%), Gaps = 5/78 (6%)
Frame = +3
Query: 504 NDDRRCKTA*RSRGNSWRRLRT---GRF-YSNAKP-PRQDFTSSAEEILHLYTGSLSSET 668
++DR + A + GN+W+ +T G F Y+ A P PR+ F S E++ + S +
Sbjct: 90 HEDRLRRAAFKVMGNAWKNFKTKLVGEFVYNPANPDPREKFPSITEQVWEEFHAK-KSTS 148
Query: 669 EGNTRYQRISPRGCRIQH 722
E R + R QH
Sbjct: 149 ESRARSEAYRLLQTRNQH 166
>03_06_0483 -
34226496-34226864,34227140-34227360,34227677-34227933,
34228388-34228483,34228660-34228805,34229774-34229977
Length = 430
Score = 31.1 bits (67), Expect = 1.1
Identities = 13/49 (26%), Positives = 28/49 (57%), Gaps = 4/49 (8%)
Frame = +1
Query: 619 VLKKFFICIQEAYPVKLKEIHVINASPLVDVV----FNIVKPFLKEKMK 753
+++ F +QE YP +L + ++ P+V V+ ++KP K+K++
Sbjct: 271 MMRSFITIVQENYPNRLGVLFIVRLPPVVRVIAQTLIQVLKPSTKQKLR 319
>06_01_0175 -
1371089-1371706,1371812-1371994,1372069-1372324,
1372407-1372976,1373423-1373529,1373664-1374136,
1374279-1374372
Length = 766
Score = 30.7 bits (66), Expect = 1.4
Identities = 26/74 (35%), Positives = 35/74 (47%), Gaps = 3/74 (4%)
Frame = -3
Query: 515 PIIIASLKTSLSWFVSRFLSSALA-MVTRRP*GVKPGSVG-PWALFSRSISSGLVTSLFA 342
P + + TSLSW F SS LA + G+ G++G W+ S + S L + FA
Sbjct: 258 PGYLFQMLTSLSWICWVFPSSVLAQQLGSGLRGLGVGAIGLDWSSISSYLGSPLASPWFA 317
Query: 341 K-NSGQAALIVKYI 303
N G IV YI
Sbjct: 318 TVNVGVGFFIVMYI 331
>02_01_0263 +
1743661-1743694,1744939-1745236,1745318-1745417,
1745500-1745766,1745859-1745936,1746023-1746124,
1746205-1746254,1746347-1746446,1746550-1746648,
1746742-1746858,1747187-1747313,1747396-1747793,
1747900-1748004
Length = 624
Score = 29.9 bits (64), Expect = 2.5
Identities = 15/66 (22%), Positives = 33/66 (50%)
Frame = +1
Query: 565 VLDASILMPSHLAKISPAVLKKFFICIQEAYPVKLKEIHVINASPLVDVVFNIVKPFLKE 744
+LD + + +K + ++ + + YP L ++ ++NA P +++N VK FL
Sbjct: 227 ILDVQGVGLKNFSKTARELIVRLQKIDNDNYPETLYQMFIVNAGPGFRLLWNTVKSFLDP 286
Query: 745 KMKKRV 762
K ++
Sbjct: 287 KTTSKI 292
>12_02_0095 +
13559997-13560232,13561295-13561683,13562092-13562387,
13562475-13563361,13563440-13563562,13563693-13563981,
13564211-13564249
Length = 752
Score = 29.5 bits (63), Expect = 3.3
Identities = 23/78 (29%), Positives = 35/78 (44%), Gaps = 5/78 (6%)
Frame = +3
Query: 504 NDDRRCKTA*RSRGNSWRRLRT---GRF-YSNAKP-PRQDFTSSAEEILHLYTGSLSSET 668
++DR + A + GN+W+ +T G F Y+ A P PR FT E++ + S
Sbjct: 122 HEDRLRRAAFKVMGNAWKNFKTKLVGEFVYNPANPDPRDKFTWITEQVWEEFHAK-KSTP 180
Query: 669 EGNTRYQRISPRGCRIQH 722
E R + R QH
Sbjct: 181 ESRARSEAYRLLQTRNQH 198
>11_04_0383 - 17004520-17005150,17005205-17005327,17005641-17007142
Length = 751
Score = 29.5 bits (63), Expect = 3.3
Identities = 16/49 (32%), Positives = 23/49 (46%), Gaps = 1/49 (2%)
Frame = -1
Query: 235 LPTHLVDGVAFSA-TP*LQLSPVPWC*HPHSIPRGFSSTVPRKAESGSP 92
LP H+ + VA ++S V WC + + GFS V A +G P
Sbjct: 568 LPLHVANEVASPLQAAAAKVSDVHWCRRSNEVKHGFSQLVAGSATAGGP 616
>04_01_0369 + 4840371-4841294,4841921-4842559
Length = 520
Score = 29.1 bits (62), Expect = 4.4
Identities = 10/41 (24%), Positives = 24/41 (58%)
Frame = +1
Query: 97 TLIQPSGELWKKIREELNEDVNTRAQDLAAIKEWLRKQPHL 219
T++ P+G+ W+K+R+ L ++ + A + + + + HL
Sbjct: 116 TIMSPAGDQWRKMRQVLTSEILSPAMERRMLGRRVEEADHL 156
>01_01_0245 +
2013821-2014171,2014278-2014671,2015158-2015289,
2015747-2015788,2016096-2017057
Length = 626
Score = 29.1 bits (62), Expect = 4.4
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = +3
Query: 630 ILHLYTGSLSSETEGNTRYQRISPRGCRIQHCKTI 734
I H YTG+ S+ E RYQ +SP+ R K I
Sbjct: 329 IHHKYTGNESNTEEELKRYQSLSPKRYRYSDLKKI 363
>02_03_0205 -
16411707-16412759,16413077-16413256,16413960-16414498,
16414798-16414825
Length = 599
Score = 28.7 bits (61), Expect = 5.8
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +1
Query: 175 DLAAIKEWLRKQPHLPDEWEDACLMT 252
D+ +I+EW QPHLP+E ++T
Sbjct: 129 DVLSIEEWSLIQPHLPNETNTKIIVT 154
>06_01_1079 + 8832779-8833960
Length = 393
Score = 28.3 bits (60), Expect = 7.6
Identities = 23/91 (25%), Positives = 36/91 (39%), Gaps = 9/91 (9%)
Frame = +1
Query: 28 RITKQLVPNWIVTYCKSEMASTATLIQPSGELWKKIREELNEDVNTRA--QDLAAIKEWL 201
R T L P+W ++ K E ++ I P E W I + + + A +L ++ W
Sbjct: 201 RFTCSLPPSWAKSHAKMEEFNSTPYISPYSERWAAIGTDADAEKRAVAVVHELLSLTLWK 260
Query: 202 R----KQPHLPDEW---EDACLMTFLRGCSF 273
+ K H E+ ED M C F
Sbjct: 261 KMSVLKLEHFRREFGLPEDTARMLHRHPCLF 291
>03_01_0549 -
4102098-4102198,4102394-4102544,4102629-4102760,
4102988-4103162,4103494-4103945,4104042-4104121,
4104342-4104408,4104709-4104814,4104924-4105033,
4105133-4105201,4105661-4105771,4106263-4106427,
4106639-4106725,4106974-4107027,4107101-4107240,
4107820-4107897,4108066-4108720
Length = 910
Score = 28.3 bits (60), Expect = 7.6
Identities = 18/83 (21%), Positives = 39/83 (46%)
Frame = +1
Query: 415 LTPQGRRVTIARALDKNLDTNQLNDVFKLAMMIGDVRLREEVEGIAGDVYVLDASILMPS 594
L+PQ R V + + D + D +D + + + DVR+ + + + G+ +D ++L S
Sbjct: 341 LSPQSRLVVTSSSDDPSSDGVLNSDAITVEVPVDDVRVGDFILVLPGETIPVDGNVLGGS 400
Query: 595 HLAKISPAVLKKFFICIQEAYPV 663
S + + ++ +PV
Sbjct: 401 SFVDESMLTGESLPVPKEKGFPV 423
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,280,429
Number of Sequences: 37544
Number of extensions: 518737
Number of successful extensions: 1511
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1462
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1511
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2209429392
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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