Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-5911
         (811 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z19158-4|CAJ76964.1|  719|Caenorhabditis elegans Hypothetical pr...    36   0.045
Z81507-2|CAB04135.1|  388|Caenorhabditis elegans Hypothetical pr...    32   0.42 
Z66524-6|CAA91418.2|  408|Caenorhabditis elegans Hypothetical pr...    31   0.98 
Z81119-7|CAB03338.2|  310|Caenorhabditis elegans Hypothetical pr...    31   1.3  
Z66512-1|CAA91322.1|  638|Caenorhabditis elegans Hypothetical pr...    31   1.3  
Z81551-1|CAB04483.2|  335|Caenorhabditis elegans Hypothetical pr...    30   2.3  
AF077545-3|AAC26304.1|  396|Caenorhabditis elegans Hypothetical ...    29   3.9  
Z72508-9|CAA96639.2|  410|Caenorhabditis elegans Hypothetical pr...    29   5.2  
Z37093-2|CAA85464.1|  218|Caenorhabditis elegans Hypothetical pr...    28   6.9  
AF040654-1|AAK21448.1| 1236|Caenorhabditis elegans Hypothetical ...    28   9.1  

>Z19158-4|CAJ76964.1|  719|Caenorhabditis elegans Hypothetical
           protein T23G5.2a protein.
          Length = 719

 Score = 35.5 bits (78), Expect = 0.045
 Identities = 17/65 (26%), Positives = 33/65 (50%)
 Frame = +1

Query: 565 VLDASILMPSHLAKISPAVLKKFFICIQEAYPVKLKEIHVINASPLVDVVFNIVKPFLKE 744
           V+D   L   HL +     L K    ++  YP  + ++ V+ A  +  V++ ++ PF+ E
Sbjct: 395 VVDLDGLSMRHLWRPGVQCLLKIIEIVEANYPETMGQVLVVRAPRVFPVLWTLISPFIDE 454

Query: 745 KMKKR 759
           K +K+
Sbjct: 455 KTRKK 459


>Z81507-2|CAB04135.1|  388|Caenorhabditis elegans Hypothetical
           protein F18A11.2 protein.
          Length = 388

 Score = 32.3 bits (70), Expect = 0.42
 Identities = 17/72 (23%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
 Frame = +1

Query: 550 AGDVYVLDAS-ILMPSHLAKISPAVLKKFFICIQEAYPVKLKEIHVINASPLVDVVFNIV 726
           +G ++++D   I     L  +     +  +  + + YP  L++I ++NA   V+V+    
Sbjct: 144 SGGLFIMDLDGISFSPKLISVLTGPYRIMWGTLFDHYPQLLQKIIIVNAPSFVNVLHQAC 203

Query: 727 KPFLKEKMKKRV 762
            PFL E  K+++
Sbjct: 204 SPFLPEDYKEKI 215


>Z66524-6|CAA91418.2|  408|Caenorhabditis elegans Hypothetical
           protein T13H5.2 protein.
          Length = 408

 Score = 31.1 bits (67), Expect = 0.98
 Identities = 14/68 (20%), Positives = 38/68 (55%)
 Frame = +1

Query: 559 VYVLDASILMPSHLAKISPAVLKKFFICIQEAYPVKLKEIHVINASPLVDVVFNIVKPFL 738
           ++ LD   ++   LA +   V+      +QE +P  +++I ++N    + V+++++ P L
Sbjct: 173 IFDLDGLSMVQIDLAALK--VVTTMLSQLQEMFPDVIRKIFIVNTPTFIQVLWSMISPCL 230

Query: 739 KEKMKKRV 762
            ++ +++V
Sbjct: 231 AKQTQQKV 238


>Z81119-7|CAB03338.2|  310|Caenorhabditis elegans Hypothetical
           protein T10H4.9 protein.
          Length = 310

 Score = 30.7 bits (66), Expect = 1.3
 Identities = 19/56 (33%), Positives = 28/56 (50%)
 Frame = -3

Query: 743 SLRNGFTMLNTTSTRGDALITCISFSFTG*ASCIQMKNFFSTAGEILARWLGIRIE 576
           SL+N F ML T+ + GDA+I+ I F+F     C     +  T   ++   L I  E
Sbjct: 35  SLKNSFGMLTTSQSIGDAVISTI-FAFLIAPMCFFNLEYLKTYSSVIGHVLIIAYE 89


>Z66512-1|CAA91322.1|  638|Caenorhabditis elegans Hypothetical
           protein F52H3.2 protein.
          Length = 638

 Score = 30.7 bits (66), Expect = 1.3
 Identities = 19/47 (40%), Positives = 26/47 (55%)
 Frame = +1

Query: 382 LNRAQGPTLPGLTPQGRRVTIARALDKNLDTNQLNDVFKLAMMIGDV 522
           LNRAQGP + GL     R  I R L K    N++N   +L ++ G+V
Sbjct: 94  LNRAQGPAVLGL-----RAQIDRKLYKTQMQNEINSTKRLEILEGEV 135


>Z81551-1|CAB04483.2|  335|Caenorhabditis elegans Hypothetical
           protein F56A12.1 protein.
          Length = 335

 Score = 29.9 bits (64), Expect = 2.3
 Identities = 24/77 (31%), Positives = 37/77 (48%)
 Frame = -1

Query: 271 SYSLGEKSSGTRLPTHLVDGVAFSATP*LQLSPVPWC*HPHSIPRGFSSTVPRKAESGSP 92
           S S    S+ +  P+H+ D  + S  P  +LS       P S+    S +V   A   SP
Sbjct: 29  SSSNSNTSNSSTSPSHISDQFSSSGGPPYELSSHILT--PSSVIPTPSPSVA-SASISSP 85

Query: 91  LMPSHFCNMSQSSLEQV 41
            +P+  C MS+ S+EQ+
Sbjct: 86  TIPAFGCTMSEYSMEQM 102


>AF077545-3|AAC26304.1|  396|Caenorhabditis elegans Hypothetical
           protein H41C03.1 protein.
          Length = 396

 Score = 29.1 bits (62), Expect = 3.9
 Identities = 16/69 (23%), Positives = 32/69 (46%), Gaps = 1/69 (1%)
 Frame = +1

Query: 559 VYVLDASIL-MPSHLAKISPAVLKKFFICIQEAYPVKLKEIHVINASPLVDVVFNIVKPF 735
           +Y+LD   L     L  I     +  +  +  AYP  +  + +INA   + +++  + P 
Sbjct: 143 IYILDLEGLKFDPALISIVTGPYRILWASVYTAYPEWINTLFLINAPSFMTLLWKAIGPL 202

Query: 736 LKEKMKKRV 762
           L E+ + +V
Sbjct: 203 LPERTRNKV 211


>Z72508-9|CAA96639.2|  410|Caenorhabditis elegans Hypothetical
           protein F28H7.8 protein.
          Length = 410

 Score = 28.7 bits (61), Expect = 5.2
 Identities = 10/29 (34%), Positives = 21/29 (72%)
 Frame = +1

Query: 682 VINASPLVDVVFNIVKPFLKEKMKKRVFF 768
           VIN+   ++V+++ + PF+ E+ K+R+ F
Sbjct: 199 VINSPSYINVLWSALSPFIPEQSKQRIVF 227


>Z37093-2|CAA85464.1|  218|Caenorhabditis elegans Hypothetical
           protein ZK669.3 protein.
          Length = 218

 Score = 28.3 bits (60), Expect = 6.9
 Identities = 8/16 (50%), Positives = 13/16 (81%)
 Frame = -2

Query: 702 EGRCVDNVYFLQFHWI 655
           EGRC D  Y++++HW+
Sbjct: 38  EGRCSDTSYWMKWHWL 53


>AF040654-1|AAK21448.1| 1236|Caenorhabditis elegans Hypothetical
           protein R06B10.1 protein.
          Length = 1236

 Score = 27.9 bits (59), Expect = 9.1
 Identities = 16/57 (28%), Positives = 31/57 (54%)
 Frame = +1

Query: 439 TIARALDKNLDTNQLNDVFKLAMMIGDVRLREEVEGIAGDVYVLDASILMPSHLAKI 609
           T+A +L+K + T ++++  KLA   G      +V+G+ GD   +  S++     +KI
Sbjct: 701 TMATSLNKFMGTVKVSNSPKLADHSGVFEAASKVQGVKGDFMAIKQSVIKLIEESKI 757


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,786,623
Number of Sequences: 27780
Number of extensions: 438549
Number of successful extensions: 1390
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1284
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1390
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1987863822
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)