Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-5908
         (759 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC024817-44|AAK93864.2|  168|Caenorhabditis elegans Hypothetical...   120   1e-27
Z37092-4|CAA85455.1|  890|Caenorhabditis elegans Hypothetical pr...    31   0.67 
U40417-7|AAA81416.1|  103|Caenorhabditis elegans Saposin-like pr...    31   0.67 
Z78061-3|CAB60286.1|  662|Caenorhabditis elegans Hypothetical pr...    29   3.6  
AL117200-16|CAB60587.1|  662|Caenorhabditis elegans Hypothetical...    29   3.6  
AF016444-8|AAB65934.1|  219|Caenorhabditis elegans Hypothetical ...    29   3.6  
Z71262-12|CAA95808.1|  545|Caenorhabditis elegans Hypothetical p...    29   4.7  
AC006682-1|AAF39956.3| 1853|Caenorhabditis elegans Hypothetical ...    29   4.7  
Z81063-1|CAB02952.1|  376|Caenorhabditis elegans Hypothetical pr...    28   8.3  
Z78412-9|CAD21655.1|  454|Caenorhabditis elegans Hypothetical pr...    28   8.3  

>AC024817-44|AAK93864.2|  168|Caenorhabditis elegans Hypothetical
           protein Y54G2A.23 protein.
          Length = 168

 Score =  120 bits (288), Expect = 1e-27
 Identities = 55/115 (47%), Positives = 77/115 (66%), Gaps = 1/115 (0%)
 Frame = +1

Query: 151 LLFLATAVQVVLSLREGDCEVCVKTVEKFAATLSDDVKKDPKKIEAEFKKFCKGSKNKEN 330
           L+ L + V VV S     CEVC K ++   A +    K  P  I    ++ C+ ++NKEN
Sbjct: 4   LVLLISLVIVVASAAAPQCEVCKKVLDDVMAKVPAGDKSKPDAIGKVIREHCETTRNKEN 63

Query: 331 RFCYYLGGLEESATGILGELSKPLSWSMPADKIC-EKLKKKDAQICDLRFDKQID 492
           +FC+Y+G L ESAT I+ E++KPLSWSMP +K+C EKLK KDAQIC+L++DK +D
Sbjct: 64  KFCFYIGALPESATSIMNEVTKPLSWSMPTEKVCLEKLKGKDAQICELKYDKPLD 118



 Score = 53.2 bits (122), Expect = 2e-07
 Identities = 21/32 (65%), Positives = 25/32 (78%)
 Frame = +2

Query: 536 RRILNDWDEVCDGCIEKTDFIKRIEELKPKYM 631
           + IL +W EVC GC EK + IKRIEELKPKY+
Sbjct: 133 KNILGEWGEVCKGCTEKAELIKRIEELKPKYV 164


>Z37092-4|CAA85455.1|  890|Caenorhabditis elegans Hypothetical
           protein F44F4.4 protein.
          Length = 890

 Score = 31.5 bits (68), Expect = 0.67
 Identities = 22/88 (25%), Positives = 37/88 (42%), Gaps = 2/88 (2%)
 Frame = +1

Query: 160 LATAVQVVLSLREGDC--EVCVKTVEKFAATLSDDVKKDPKKIEAEFKKFCKGSKNKENR 333
           + TA+ +  S+  G    E  +K V K +  +S + K +   +E  F +FC+G       
Sbjct: 84  ITTAILIRSSITNGSLLEEQRLKEVVKVSDFISTNFKLNVSGVEKNFNQFCRGFCQANEP 143

Query: 334 FCYYLGGLEESATGILGELSKPLSWSMP 417
              Y  GL+         +SK +  S P
Sbjct: 144 VRQYYNGLQILGKNQTDGISKRIDLSYP 171


>U40417-7|AAA81416.1|  103|Caenorhabditis elegans Saposin-like
           protein family protein4 protein.
          Length = 103

 Score = 31.5 bits (68), Expect = 0.67
 Identities = 16/50 (32%), Positives = 26/50 (52%)
 Frame = +1

Query: 151 LLFLATAVQVVLSLREGDCEVCVKTVEKFAATLSDDVKKDPKKIEAEFKK 300
           L+F+ATAV +        C++C   V+K+  ++  DV    K  + E KK
Sbjct: 10  LVFVATAVVLPHQRNSLGCQMCELAVKKYDGSVDKDVNGIKKDFDTECKK 59


>Z78061-3|CAB60286.1|  662|Caenorhabditis elegans Hypothetical
           protein C48G7.3 protein.
          Length = 662

 Score = 29.1 bits (62), Expect = 3.6
 Identities = 14/50 (28%), Positives = 24/50 (48%)
 Frame = +1

Query: 172 VQVVLSLREGDCEVCVKTVEKFAATLSDDVKKDPKKIEAEFKKFCKGSKN 321
           V+ +  ++EGD      T+ +F A   D  + DP  +    ++F  G KN
Sbjct: 250 VEELAQVKEGDNACFGLTLRQFVACTKDTKETDPAVVIRNVRQFINGMKN 299


>AL117200-16|CAB60587.1|  662|Caenorhabditis elegans Hypothetical
           protein C48G7.3 protein.
          Length = 662

 Score = 29.1 bits (62), Expect = 3.6
 Identities = 14/50 (28%), Positives = 24/50 (48%)
 Frame = +1

Query: 172 VQVVLSLREGDCEVCVKTVEKFAATLSDDVKKDPKKIEAEFKKFCKGSKN 321
           V+ +  ++EGD      T+ +F A   D  + DP  +    ++F  G KN
Sbjct: 250 VEELAQVKEGDNACFGLTLRQFVACTKDTKETDPAVVIRNVRQFINGMKN 299


>AF016444-8|AAB65934.1|  219|Caenorhabditis elegans Hypothetical
           protein C36C5.12 protein.
          Length = 219

 Score = 29.1 bits (62), Expect = 3.6
 Identities = 14/37 (37%), Positives = 21/37 (56%)
 Frame = +1

Query: 211 VCVKTVEKFAATLSDDVKKDPKKIEAEFKKFCKGSKN 321
           +C++ +  FAA + D++  D K    EFKK C   KN
Sbjct: 59  LCIERLRDFAAKV-DELDMDKKSELKEFKKTCDSLKN 94


>Z71262-12|CAA95808.1|  545|Caenorhabditis elegans Hypothetical
           protein F22D6.3a protein.
          Length = 545

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 35/105 (33%), Positives = 48/105 (45%), Gaps = 4/105 (3%)
 Frame = +1

Query: 160 LATAVQVVL-SLREGDCEVCVKTVE--KFAATLSDDVKKDPKKIEAEFKKFCK-GSKNKE 327
           LAT VQ +L S   G+  +  K+ E   +       +KK  KK EAE KK  K G + KE
Sbjct: 23  LATLVQAMLISKNSGEFLMKKKSEEGESWEPAAKAAIKKAVKKYEAEVKKLEKAGCREKE 82

Query: 328 NRFCYYLGGLEESATGILGELSKPLSWSMPADKICEKLKKKDAQI 462
                +   LEE A  I   L K L       KI E ++ +D ++
Sbjct: 83  AEEAQH-AALEE-AKKITFSLDKSLP-EAKVIKIGESVQHRDQRV 124


>AC006682-1|AAF39956.3| 1853|Caenorhabditis elegans Hypothetical
            protein R193.2 protein.
          Length = 1853

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 17/58 (29%), Positives = 29/58 (50%)
 Frame = -3

Query: 613  LFYSLNEVSLLDATIADLIPVVQNPSSSHVLLVSSNQHYLDRFVCRTLGHRFVHLFSS 440
            + + L+E  L D+  + +   +Q+ +S   +  SS Q  L  +  RT+ H   HLF S
Sbjct: 1500 IIFLLDETGLTDSDFSIMKSFLQDFTSKFSVGPSSTQFALQTYNGRTIPHDGFHLFES 1557


>Z81063-1|CAB02952.1|  376|Caenorhabditis elegans Hypothetical
           protein F15D3.2 protein.
          Length = 376

 Score = 27.9 bits (59), Expect = 8.3
 Identities = 17/45 (37%), Positives = 22/45 (48%)
 Frame = +1

Query: 160 LATAVQVVLSLREGDCEVCVKTVEKFAATLSDDVKKDPKKIEAEF 294
           L+ A Q+    +E   E   K V  FA+T  DD   DPK + A F
Sbjct: 120 LSGAEQLFKQDKEHSREHYRKVVIVFASTYKDDGANDPKPVAARF 164


>Z78412-9|CAD21655.1|  454|Caenorhabditis elegans Hypothetical
           protein M176.10 protein.
          Length = 454

 Score = 27.9 bits (59), Expect = 8.3
 Identities = 17/65 (26%), Positives = 28/65 (43%)
 Frame = -2

Query: 425 LSAGIDQLKGFDNSPKMPVADSSRPPK**QNLFSLFFEPLQNFLNSASIFLGSFFTSSDS 246
           + A I+ + G  N+  +    +  PPK  +  FS  F   +N   + +  +G FF    S
Sbjct: 385 IHADIEVIVGNTNATTITSTVAPIPPK--KGFFSTLFGSFKNLFGTVTNSIGGFFIDMGS 442

Query: 245 VAANF 231
              NF
Sbjct: 443 RITNF 447


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,620,251
Number of Sequences: 27780
Number of extensions: 334639
Number of successful extensions: 959
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 926
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 958
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1809061256
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)