Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-5906
         (621 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY146740-1|AAO12100.1|  139|Anopheles gambiae odorant-binding pr...    27   0.36 
AY873992-1|AAW71999.1|  259|Anopheles gambiae nanos protein.           23   5.9  
AY583530-1|AAS93544.1|  260|Anopheles gambiae NOS protein protein.     23   5.9  

>AY146740-1|AAO12100.1|  139|Anopheles gambiae odorant-binding
           protein AgamOBP9 protein.
          Length = 139

 Score = 27.5 bits (58), Expect = 0.36
 Identities = 14/41 (34%), Positives = 21/41 (51%)
 Frame = +2

Query: 449 LSCIFRKIEXFVSTNDPAVVEIRL*LIYIMSLNIIGGSIVK 571
           + CIF K++ F  TN P V  + + L +    N +   IVK
Sbjct: 63  IKCIFNKMQLFDDTNGPIVDNLVVQLAHGRDANEVREEIVK 103


>AY873992-1|AAW71999.1|  259|Anopheles gambiae nanos protein.
          Length = 259

 Score = 23.4 bits (48), Expect = 5.9
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = +3

Query: 336 SETRPTDKIRRETQCAVSECWF 401
           S TRP  K R ++ C +  C F
Sbjct: 137 STTRPLRKCRNKSTCELDHCVF 158


>AY583530-1|AAS93544.1|  260|Anopheles gambiae NOS protein protein.
          Length = 260

 Score = 23.4 bits (48), Expect = 5.9
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = +3

Query: 336 SETRPTDKIRRETQCAVSECWF 401
           S TRP  K R ++ C +  C F
Sbjct: 138 STTRPLRKCRNKSTCELDHCVF 159


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 544,589
Number of Sequences: 2352
Number of extensions: 9073
Number of successful extensions: 13
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 60214320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)