Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-5904
(305 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_03_1577 - 27869596-27869682,27869769-27869869,27869956-278699... 30 0.41
07_03_0735 + 21075033-21075846,21077065-21077199,21077384-210775... 29 0.72
01_01_0829 + 6471032-6471870,6472490-6472685,6472772-6472956,647... 29 0.72
03_05_0070 - 20478396-20478505,20478605-20478780,20481162-204812... 28 1.7
02_03_0171 + 15945591-15945681,15947068-15947138,15947715-159478... 28 1.7
10_08_0190 + 15607241-15607409,15607932-15607990,15608883-156089... 27 2.2
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121... 27 2.2
09_02_0479 - 9753161-9753171,9755260-9755547,9755883-9756222 27 2.9
07_03_0734 + 21067747-21068569,21069678-21069812,21069967-210701... 27 2.9
07_03_0732 + 21050941-21051811,21053676-21053720,21053931-210539... 27 2.9
04_04_1085 - 30719921-30719960,30720206-30720351,30720469-307205... 27 2.9
10_06_0114 - 10911713-10911724,10913642-10913772,10913869-109142... 27 3.8
12_02_0992 + 25083397-25083537,25084198-25084228,25084971-250851... 26 6.7
11_06_0118 + 20308921-20309204,20310559-20310700 26 6.7
06_03_0937 - 26113346-26113645,26113721-26114193,26114436-26114724 26 6.7
04_04_1265 - 32231511-32231813,32231906-32232024,32232511-322327... 26 6.7
02_05_0744 - 31428834-31428991,31429079-31429155,31429252-314293... 26 6.7
08_01_0398 - 3515439-3515573,3515965-3516516 25 8.9
07_03_1154 - 24402550-24405073,24405909-24406330,24407318-24408856 25 8.9
07_03_0082 - 13222635-13223350,13223368-13223928,13224095-132248... 25 8.9
05_01_0004 - 34967-35149,35340-35501,36078-36225,36309-36385,365... 25 8.9
04_04_1274 - 32312342-32312512,32312534-32312629,32312743-323128... 25 8.9
04_04_0372 + 24781572-24781612,24781696-24782413 25 8.9
01_04_0146 - 16711102-16711288,16712038-16712760,16712848-16712888 25 8.9
>07_03_1577 -
27869596-27869682,27869769-27869869,27869956-27869995,
27870879-27870953
Length = 100
Score = 29.9 bits (64), Expect = 0.41
Identities = 10/25 (40%), Positives = 19/25 (76%)
Frame = +1
Query: 115 DLKSQLEGFNTSCLRDVDTNEKIVL 189
DL+S+L+ NT CL + + N+K+++
Sbjct: 54 DLQSKLDAVNTECLAEKEKNKKLII 78
>07_03_0735 +
21075033-21075846,21077065-21077199,21077384-21077517,
21077604-21077814,21078033-21078270,21078346-21078496,
21078593-21078931
Length = 673
Score = 29.1 bits (62), Expect = 0.72
Identities = 14/40 (35%), Positives = 23/40 (57%)
Frame = +1
Query: 178 KIVLPSAEDVATEKTQKSLFDGIEKFDSSQLKHTETQEKN 297
K VLPS E++A ++ S GIE+ + + + Q+KN
Sbjct: 361 KGVLPSGEEIAVKRLSMSSGQGIEELKNELVLVAKLQQKN 400
>01_01_0829 +
6471032-6471870,6472490-6472685,6472772-6472956,
6473206-6473539,6473629-6473833,6474927-6475033,
6475117-6475269
Length = 672
Score = 29.1 bits (62), Expect = 0.72
Identities = 16/31 (51%), Positives = 19/31 (61%)
Frame = +2
Query: 77 TLPP*KTSPRSPQT*RVSSKASTPAVSVTST 169
TLPP + SP SP T SSK TP+ S S+
Sbjct: 31 TLPPGRLSPVSPLTHSSSSKLPTPSSSSGSS 61
>03_05_0070 -
20478396-20478505,20478605-20478780,20481162-20481265,
20481346-20481504,20481718-20481857,20482222-20482311,
20482902-20482970,20484295-20484516,20486175-20486293,
20486377-20486492,20488058-20488146,20488790-20488883
Length = 495
Score = 27.9 bits (59), Expect = 1.7
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = +1
Query: 91 KDLPKVATDLKSQLEGFNTSCLRDVDTNEKI 183
K+L + DLKS+LEG+NT D++ + +
Sbjct: 266 KELDERRHDLKSELEGYNTGDSDDINKKKAL 296
>02_03_0171 +
15945591-15945681,15947068-15947138,15947715-15947817,
15948189-15948328,15948535-15948693,15948775-15948878,
15950373-15950548,15952643-15952832,15953704-15953803,
15954171-15954339,15954908-15954990,15955073-15955149,
15955386-15955557
Length = 544
Score = 27.9 bits (59), Expect = 1.7
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = +1
Query: 91 KDLPKVATDLKSQLEGFNTSCLRDVDTNEKI 183
K+L + DLKS+LEG+NT D++ + +
Sbjct: 88 KELDERMHDLKSELEGYNTGDSDDINKKKAL 118
>10_08_0190 +
15607241-15607409,15607932-15607990,15608883-15608991,
15609394-15609551,15609976-15610044,15610158-15610847,
15611112-15611629,15611725-15611789,15613010-15613089,
15613894-15613998,15614768-15614881,15615029-15615168,
15615257-15615385,15615903-15616055,15616186-15616327
Length = 899
Score = 27.5 bits (58), Expect = 2.2
Identities = 12/35 (34%), Positives = 23/35 (65%)
Frame = -1
Query: 245 IPSNKDFWVFSVATSSADGSTIFSLVSTSRRQLVL 141
+PSN+ + ++ TSS++GS FSL +++ + L
Sbjct: 500 LPSNESWDYYASRTSSSNGSVYFSLQNSTNSDMDL 534
>10_01_0100 +
1209424-1209538,1210373-1211073,1211158-1211379,
1211452-1211878,1212091-1213219,1213623-1213746,
1214207-1214278,1215480-1215578,1215617-1215640,
1215704-1215745,1215815-1215895,1215983-1216114,
1216115-1216196,1216271-1216365,1218499-1218570,
1218676-1218792,1219379-1219447,1219521-1219587,
1219886-1220025
Length = 1269
Score = 27.5 bits (58), Expect = 2.2
Identities = 17/52 (32%), Positives = 23/52 (44%)
Frame = +2
Query: 26 PLPHQKYIDSEWPAP*VTLPP*KTSPRSPQT*RVSSKASTPAVSVTSTPMKR 181
P P I +++PAP PP ++S R+P SSK P P R
Sbjct: 651 PPPPAPGIGNKFPAPPPPPPPPRSSSRTPTGAATSSKGPPPPPPPPLPPANR 702
>09_02_0479 - 9753161-9753171,9755260-9755547,9755883-9756222
Length = 212
Score = 27.1 bits (57), Expect = 2.9
Identities = 10/23 (43%), Positives = 18/23 (78%)
Frame = +2
Query: 122 RVSSKASTPAVSVTSTPMKRLCF 190
+VSS++S+P SVT+ ++ +CF
Sbjct: 72 QVSSQSSSPVESVTTATLRPICF 94
>07_03_0734 +
21067747-21068569,21069678-21069812,21069967-21070100,
21070182-21070449,21070472-21070709,21070787-21070937,
21071040-21071387
Length = 698
Score = 27.1 bits (57), Expect = 2.9
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = +1
Query: 178 KIVLPSAEDVATEKTQKSLFDGIEKFDSSQLKHTETQEKN 297
K VLP+ E++A ++ S GIE+ + + + Q KN
Sbjct: 364 KGVLPNGEEIAVKRLSMSSGQGIEELKNELVLVAKLQHKN 403
>07_03_0732 +
21050941-21051811,21053676-21053720,21053931-21053942,
21054056-21054067,21054429-21054554,21054727-21054857,
21054939-21055149,21055237-21055474,21055557-21055707,
21055810-21055895,21055928-21055976
Length = 643
Score = 27.1 bits (57), Expect = 2.9
Identities = 13/40 (32%), Positives = 23/40 (57%)
Frame = +1
Query: 178 KIVLPSAEDVATEKTQKSLFDGIEKFDSSQLKHTETQEKN 297
K VLPS +++A ++ +S GIE+ + + + Q KN
Sbjct: 399 KGVLPSDQEIAVKRLSQSSRQGIEELKNELVLVAKLQHKN 438
>04_04_1085 -
30719921-30719960,30720206-30720351,30720469-30720546,
30720649-30720715,30720948-30721090,30721504-30721535,
30721769-30722168,30722540-30722601,30722716-30722892,
30723078-30723201,30723590-30723760
Length = 479
Score = 27.1 bits (57), Expect = 2.9
Identities = 14/54 (25%), Positives = 31/54 (57%), Gaps = 2/54 (3%)
Frame = +1
Query: 64 CSVSDTPSLKDLPKVATDLKSQLEGFNTSCLRDVDTNEKIVL--PSAEDVATEK 219
C + DT +K PK+ +D+K Q+E + + + + + +V+ + +DV +E+
Sbjct: 355 CDIEDT-LIKSNPKLTSDVKVQVEAEDMAMMLQLKPEDFVVVLDENGKDVTSEQ 407
>10_06_0114 -
10911713-10911724,10913642-10913772,10913869-10914229,
10914339-10915081,10918916-10918964,10919063-10919334,
10919426-10919519,10919618-10920000,10920504-10920575,
10920656-10920778,10920875-10921048,10921115-10921579,
10921662-10921839
Length = 1018
Score = 26.6 bits (56), Expect = 3.8
Identities = 10/28 (35%), Positives = 14/28 (50%)
Frame = -2
Query: 214 QWQRLQQTEAQSFHWCRRHGDSWC*SLR 131
Q+ + Q S+H RR D WC +R
Sbjct: 665 QFNQATQQGKDSYHLYRRRNDGWCVKIR 692
>12_02_0992 +
25083397-25083537,25084198-25084228,25084971-25085139,
25085228-25085291,25085408-25085474,25086543-25086586,
25086835-25086922,25087079-25087238,25087659-25087779,
25087859-25087942,25088043-25088162,25088689-25088901,
25088995-25089054,25089144-25089262,25089407-25089465,
25089585-25089919
Length = 624
Score = 25.8 bits (54), Expect = 6.7
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = -1
Query: 266 WLESNFSIPSNKDFWVFSVATSSADGST 183
WLES S+ D SVA+SS+ ST
Sbjct: 534 WLESEIIFGSSIDISATSVASSSSSSST 561
>11_06_0118 + 20308921-20309204,20310559-20310700
Length = 141
Score = 25.8 bits (54), Expect = 6.7
Identities = 16/33 (48%), Positives = 20/33 (60%)
Frame = +2
Query: 65 AP*VTLPP*KTSPRSPQT*RVSSKASTPAVSVT 163
AP LPP +PRSP RV+ AST A +V+
Sbjct: 46 APPAPLPPRGQAPRSPLL-RVAIPASTAAEAVS 77
>06_03_0937 - 26113346-26113645,26113721-26114193,26114436-26114724
Length = 353
Score = 25.8 bits (54), Expect = 6.7
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = +1
Query: 109 ATDLKSQLEGFNTSCLRDVDTNEKIVLPSAEDVATEKT 222
A+ + LE +SCL D + NE+ ED AT +
Sbjct: 160 ASKPRCNLESAASSCLTDTNENERASARMMEDQATSSS 197
>04_04_1265 -
32231511-32231813,32231906-32232024,32232511-32232721,
32232870-32232942,32233329-32233603,32233684-32233831,
32233906-32234143,32234325-32234457,32234852-32235045,
32235114-32235218,32235332-32236640
Length = 1035
Score = 25.8 bits (54), Expect = 6.7
Identities = 15/56 (26%), Positives = 26/56 (46%)
Frame = +1
Query: 130 LEGFNTSCLRDVDTNEKIVLPSAEDVATEKTQKSLFDGIEKFDSSQLKHTETQEKN 297
+EG CL D +L ++VA ++ K G+E+F + + + Q KN
Sbjct: 809 IEGKPLPCLLDFVPTNLGMLGGNKEVAIKRLSKHSGQGVEEFRNEVVLIAKLQHKN 864
>02_05_0744 -
31428834-31428991,31429079-31429155,31429252-31429302,
31429379-31429452,31429522-31429647,31431317-31431461,
31431552-31432114
Length = 397
Score = 25.8 bits (54), Expect = 6.7
Identities = 10/33 (30%), Positives = 18/33 (54%)
Frame = -3
Query: 159 TETAGVEAFELTLQVCGDLGEVFQGGSVTHGAG 61
T++AG++ E +CG + ++GG G G
Sbjct: 205 TDSAGIDGVENMKLICGTVRAEWKGGEEREGKG 237
>08_01_0398 - 3515439-3515573,3515965-3516516
Length = 228
Score = 25.4 bits (53), Expect = 8.9
Identities = 18/74 (24%), Positives = 37/74 (50%), Gaps = 8/74 (10%)
Frame = +1
Query: 70 VSDTPSLKDLPKVATDLKSQ---LEGFNTSCLRDVDTNEK---IVLPSAED--VATEKTQ 225
+S P + K+ DL+ + LE NT+C+R ++ +K ++L E+ ++ + Q
Sbjct: 137 ISLQPPRSETEKLIADLEKEIANLEAENTACIRTLELRKKQFALLLHVVEELQISIDDEQ 196
Query: 226 KSLFDGIEKFDSSQ 267
+S+ D + Q
Sbjct: 197 RSIADELRAATEEQ 210
>07_03_1154 - 24402550-24405073,24405909-24406330,24407318-24408856
Length = 1494
Score = 25.4 bits (53), Expect = 8.9
Identities = 10/29 (34%), Positives = 18/29 (62%)
Frame = -3
Query: 231 RLLGLLSGNVFSRRKHNLFIGVDVTETAG 145
++LG L ++ R HN +IG + + +AG
Sbjct: 1344 KVLGSLPSLLYLRLHHNAYIGTEFSASAG 1372
>07_03_0082 -
13222635-13223350,13223368-13223928,13224095-13224839,
13226548-13226638,13227330-13227342,13227633-13227689,
13229170-13229260,13229444-13229476,13229588-13230085
Length = 934
Score = 25.4 bits (53), Expect = 8.9
Identities = 13/29 (44%), Positives = 16/29 (55%), Gaps = 1/29 (3%)
Frame = +1
Query: 94 DLPKVA-TDLKSQLEGFNTSCLRDVDTNE 177
DLP V T + QL G C+R+VD E
Sbjct: 584 DLPLVLMTKARGQLYGSRFGCVREVDVEE 612
>05_01_0004 -
34967-35149,35340-35501,36078-36225,36309-36385,
36507-36577,36850-37263,37518-38268
Length = 601
Score = 25.4 bits (53), Expect = 8.9
Identities = 14/49 (28%), Positives = 23/49 (46%)
Frame = +2
Query: 26 PLPHQKYIDSEWPAP*VTLPP*KTSPRSPQT*RVSSKASTPAVSVTSTP 172
PLP + P P PP + SP P+ ++++ P + T+TP
Sbjct: 65 PLPSATPPLAASPPPPPPPPPPRNSPSPPKPPSQAAQSPLPPTTTTTTP 113
>04_04_1274 -
32312342-32312512,32312534-32312629,32312743-32312893,
32313120-32313357,32313467-32313677,32313827-32314020,
32315224-32315227
Length = 354
Score = 25.4 bits (53), Expect = 8.9
Identities = 10/40 (25%), Positives = 22/40 (55%)
Frame = +1
Query: 178 KIVLPSAEDVATEKTQKSLFDGIEKFDSSQLKHTETQEKN 297
K VLP +++A ++ G+E+F + + ++ Q +N
Sbjct: 66 KGVLPDGQEIAVKRLSNRSSQGLEEFKNEVIVLSKLQHRN 105
>04_04_0372 + 24781572-24781612,24781696-24782413
Length = 252
Score = 25.4 bits (53), Expect = 8.9
Identities = 9/22 (40%), Positives = 15/22 (68%)
Frame = -1
Query: 83 GVSLTEQAILNQYIFDEEGDRR 18
G SLT+ ++ +++ DEE RR
Sbjct: 167 GKSLTDDILMRRFVVDEEATRR 188
>01_04_0146 - 16711102-16711288,16712038-16712760,16712848-16712888
Length = 316
Score = 25.4 bits (53), Expect = 8.9
Identities = 9/22 (40%), Positives = 15/22 (68%)
Frame = -1
Query: 83 GVSLTEQAILNQYIFDEEGDRR 18
G SLT+ ++ +++ DEE RR
Sbjct: 179 GKSLTDDILMRRFVVDEEATRR 200
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.315 0.129 0.360
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,439,206
Number of Sequences: 37544
Number of extensions: 174846
Number of successful extensions: 617
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 608
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 617
length of database: 14,793,348
effective HSP length: 71
effective length of database: 12,127,724
effective search space used: 363831720
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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