Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-5904
         (305 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439353-11|CAD27933.1|  615|Anopheles gambiae 30E5.11 protein.        24   1.1  
AF395080-1|AAK97462.1|  537|Anopheles gambiae zinc finger transc...    22   4.5  
AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcript...    22   6.0  
U89799-1|AAD03792.1|  332|Anopheles gambiae Tc1-like transposase...    21   7.9  
CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transpos...    21   7.9  
AY135184-1|AAN17505.1| 1009|Anopheles gambiae laccase 1 protein.       21   7.9  
AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcript...    21   7.9  

>AJ439353-11|CAD27933.1|  615|Anopheles gambiae 30E5.11 protein.
          Length = 615

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = -2

Query: 196 QTEAQSFHWCRRHGD 152
           QT +Q+ HW + HGD
Sbjct: 222 QTLSQANHWLKSHGD 236


>AF395080-1|AAK97462.1|  537|Anopheles gambiae zinc finger
           transcription factor pannier protein.
          Length = 537

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 14/41 (34%), Positives = 18/41 (43%), Gaps = 1/41 (2%)
 Frame = -2

Query: 265 GSNQTSRYRRIKT-SGSSQWQRLQQTEAQSFHWCRRHGDSW 146
           G  QT R    K  +GS + Q L     +S H    HG S+
Sbjct: 256 GLLQTDRNGNSKNLTGSPKSQNLSSPTIRSLHISPHHGQSY 296


>AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1222

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 13/32 (40%), Positives = 17/32 (53%)
 Frame = -3

Query: 213 SGNVFSRRKHNLFIGVDVTETAGVEAFELTLQ 118
           SG   +R    LFI   V+ +AGV  FE  +Q
Sbjct: 73  SGIAAARINDVLFICCYVSPSAGVSEFEEVMQ 104


>U89799-1|AAD03792.1|  332|Anopheles gambiae Tc1-like transposase
           protein.
          Length = 332

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 13/36 (36%), Positives = 20/36 (55%)
 Frame = -1

Query: 239 SNKDFWVFSVATSSADGSTIFSLVSTSRRQLVLKPS 132
           +N+D  V      S D + I +L ST +RQL  +P+
Sbjct: 251 ANQDVQVLPWPALSPDLNPIENLWSTLKRQLKNQPA 286


>CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transposon
           polyprotein protein.
          Length = 1726

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 8/11 (72%), Positives = 10/11 (90%)
 Frame = +1

Query: 97  LPKVATDLKSQ 129
           LPK+ATDL S+
Sbjct: 523 LPKIATDLPSE 533


>AY135184-1|AAN17505.1| 1009|Anopheles gambiae laccase 1 protein.
          Length = 1009

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = -3

Query: 126 TLQVCGDLGEVFQGGSVT 73
           TLQ C +  EV+  G VT
Sbjct: 111 TLQRCDNFCEVYANGEVT 128


>AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1168

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 7/11 (63%), Positives = 7/11 (63%)
 Frame = -2

Query: 193 TEAQSFHWCRR 161
           TEA    WCRR
Sbjct: 805 TEATDLQWCRR 815


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.315    0.129    0.360 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 302,644
Number of Sequences: 2352
Number of extensions: 5832
Number of successful extensions: 15
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 563,979
effective HSP length: 55
effective length of database: 434,619
effective search space used: 19992474
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)