Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-5901
         (761 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954257-7|CAJ14158.1|  284|Anopheles gambiae signal sequence re...   169   8e-44
AY344825-1|AAR02436.1|  153|Anopheles gambiae peritrophin A prot...    24   4.5  
CR954257-6|CAJ14157.1|  375|Anopheles gambiae RrnaAD, ribosomal ...    23   7.8  

>CR954257-7|CAJ14158.1|  284|Anopheles gambiae signal sequence
           receptor protein.
          Length = 284

 Score =  169 bits (411), Expect = 8e-44
 Identities = 88/177 (49%), Positives = 111/177 (62%), Gaps = 3/177 (1%)
 Frame = +1

Query: 58  KLIYFTFLIVPAALLCLGSGN--ILARAXXXXXXXXXXXXXXXNQVVGDDALVDDDESVV 231
           K      L +PA LL + +G+      A                 VV D+   +DD    
Sbjct: 3   KFFVLLLLALPAVLLTVNTGSSPFAFAAEDELDEELVDVETEDAAVVADETEPEDDLETT 62

Query: 232 KSSQDIDTTILFTKPVPSLGDLTFDIQAGYPVEFFVGFINKGSV-DYVVESMEASFRYPM 408
           KS  D DT +LFT+P+ + G    ++ AGYPVEF VGF NKG   D+VVES+EASFRY M
Sbjct: 63  KSP-DADTYLLFTRPLHASGS-QLELPAGYPVEFLVGFTNKGQFEDFVVESVEASFRYAM 120

Query: 409 DYTYYIQNFTALPYNREVKPKQEATFAYSFIPNEAFAGRPFGLNVQLNYRDASGNAY 579
           D++Y+IQNF+A+PYNREVKP  EAT AYSF+P E+FAGRPFGLN+ LNYRD  GN +
Sbjct: 121 DFSYFIQNFSAVPYNREVKPGHEATVAYSFLPTESFAGRPFGLNIALNYRDGRGNQF 177



 Score = 49.6 bits (113), Expect = 1e-07
 Identities = 21/27 (77%), Positives = 24/27 (88%)
 Frame = +2

Query: 584 EAVYNQTLNIVEVSEGLDGETFFLYVF 664
           EAV+N+T+ I EV EGLDGETFFLYVF
Sbjct: 179 EAVFNETVQITEVDEGLDGETFFLYVF 205


>AY344825-1|AAR02436.1|  153|Anopheles gambiae peritrophin A
           protein.
          Length = 153

 Score = 24.2 bits (50), Expect = 4.5
 Identities = 9/17 (52%), Positives = 10/17 (58%)
 Frame = -2

Query: 415 CSPLDSGKMPPWILLHS 365
           C P D  K PP +L HS
Sbjct: 21  CPPQDDPKQPPVLLAHS 37


>CR954257-6|CAJ14157.1|  375|Anopheles gambiae RrnaAD, ribosomal RNA
           adenine dimethylaseprotein.
          Length = 375

 Score = 23.4 bits (48), Expect = 7.8
 Identities = 13/43 (30%), Positives = 16/43 (37%)
 Frame = +1

Query: 403 PMDYTYYIQNFTALPYNREVKPKQEATFAYSFIPNEAFAGRPF 531
           P+    Y+ NF       E+ P Q  T    FI    F   PF
Sbjct: 291 PLSSNDYVDNFNIFTEFGELTPAQVLTLFNEFINWSEFHQSPF 333


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 717,400
Number of Sequences: 2352
Number of extensions: 13919
Number of successful extensions: 24
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 79002570
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)