Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-5901
(761 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CR456961-1|CAG33242.1| 286|Homo sapiens SSR1 protein. 135 2e-31
BT007387-1|AAP36051.1| 286|Homo sapiens signal sequence recepto... 135 2e-31
BC007710-1|AAH07710.1| 286|Homo sapiens signal sequence recepto... 135 2e-31
AK222809-1|BAD96529.1| 286|Homo sapiens signal sequence recepto... 135 2e-31
AK222762-1|BAD96482.1| 286|Homo sapiens signal sequence recepto... 135 2e-31
AF156965-1|AAD48778.1| 286|Homo sapiens translocon-associated p... 135 2e-31
AK075562-1|BAC11701.1| 259|Homo sapiens protein ( Homo sapiens ... 134 2e-31
AL139095-1|CAI16444.1| 286|Homo sapiens signal sequence recepto... 134 3e-31
Z12830-1|CAA78290.1| 286|Homo sapiens SSR alpha subunit protein. 133 8e-31
>CR456961-1|CAG33242.1| 286|Homo sapiens SSR1 protein.
Length = 286
Score = 135 bits (326), Expect = 2e-31
Identities = 67/129 (51%), Positives = 86/129 (66%)
Frame = +1
Query: 196 DDALVDDDESVVKSSQDIDTTILFTKPVPSLGDLTFDIQAGYPVEFFVGFINKGSVDYVV 375
+D +D ++S DTTILF K G+ D A V+F VGF NKG+ D++V
Sbjct: 66 EDKEEEDVSGEPEASPSADTTILFVK-----GE---DFPANNIVKFLVGFTNKGTEDFIV 117
Query: 376 ESMEASFRYPMDYTYYIQNFTALPYNREVKPKQEATFAYSFIPNEAFAGRPFGLNVQLNY 555
ES++ASFRYP DY +YIQNFTALP N V P+++ATF YSFIP E GRPFGL + LNY
Sbjct: 118 ESLDASFRYPQDYQFYIQNFTALPLNTVVPPQRQATFEYSFIPAEPMGGRPFGLVINLNY 177
Query: 556 RDASGNAYQ 582
+D +GN +Q
Sbjct: 178 KDLNGNVFQ 186
Score = 42.3 bits (95), Expect = 0.002
Identities = 15/28 (53%), Positives = 24/28 (85%)
Frame = +2
Query: 581 REAVYNQTLNIVEVSEGLDGETFFLYVF 664
++AV+NQT+ ++E +GLDGET F+Y+F
Sbjct: 186 QDAVFNQTVTVIEREDGLDGETIFMYMF 213
>BT007387-1|AAP36051.1| 286|Homo sapiens signal sequence receptor,
alpha (translocon-associated protein alpha) protein.
Length = 286
Score = 135 bits (326), Expect = 2e-31
Identities = 67/129 (51%), Positives = 86/129 (66%)
Frame = +1
Query: 196 DDALVDDDESVVKSSQDIDTTILFTKPVPSLGDLTFDIQAGYPVEFFVGFINKGSVDYVV 375
+D +D ++S DTTILF K G+ D A V+F VGF NKG+ D++V
Sbjct: 66 EDKEEEDVSGEPEASPSADTTILFVK-----GE---DFPANNIVKFLVGFTNKGTEDFIV 117
Query: 376 ESMEASFRYPMDYTYYIQNFTALPYNREVKPKQEATFAYSFIPNEAFAGRPFGLNVQLNY 555
ES++ASFRYP DY +YIQNFTALP N V P+++ATF YSFIP E GRPFGL + LNY
Sbjct: 118 ESLDASFRYPQDYQFYIQNFTALPLNTVVPPQRQATFEYSFIPAEPMGGRPFGLVINLNY 177
Query: 556 RDASGNAYQ 582
+D +GN +Q
Sbjct: 178 KDLNGNVFQ 186
Score = 42.3 bits (95), Expect = 0.002
Identities = 15/28 (53%), Positives = 24/28 (85%)
Frame = +2
Query: 581 REAVYNQTLNIVEVSEGLDGETFFLYVF 664
++AV+NQT+ ++E +GLDGET F+Y+F
Sbjct: 186 QDAVFNQTVTVIEREDGLDGETIFMYMF 213
>BC007710-1|AAH07710.1| 286|Homo sapiens signal sequence receptor,
alpha (translocon-associated protein alpha) protein.
Length = 286
Score = 135 bits (326), Expect = 2e-31
Identities = 67/129 (51%), Positives = 86/129 (66%)
Frame = +1
Query: 196 DDALVDDDESVVKSSQDIDTTILFTKPVPSLGDLTFDIQAGYPVEFFVGFINKGSVDYVV 375
+D +D ++S DTTILF K G+ D A V+F VGF NKG+ D++V
Sbjct: 66 EDKEEEDVSGEPEASPSADTTILFVK-----GE---DFPANNIVKFLVGFTNKGTEDFIV 117
Query: 376 ESMEASFRYPMDYTYYIQNFTALPYNREVKPKQEATFAYSFIPNEAFAGRPFGLNVQLNY 555
ES++ASFRYP DY +YIQNFTALP N V P+++ATF YSFIP E GRPFGL + LNY
Sbjct: 118 ESLDASFRYPQDYQFYIQNFTALPLNTVVPPQRQATFEYSFIPAEPMGGRPFGLVINLNY 177
Query: 556 RDASGNAYQ 582
+D +GN +Q
Sbjct: 178 KDLNGNVFQ 186
Score = 42.3 bits (95), Expect = 0.002
Identities = 15/28 (53%), Positives = 24/28 (85%)
Frame = +2
Query: 581 REAVYNQTLNIVEVSEGLDGETFFLYVF 664
++AV+NQT+ ++E +GLDGET F+Y+F
Sbjct: 186 QDAVFNQTVTVIEREDGLDGETIFMYMF 213
>AK222809-1|BAD96529.1| 286|Homo sapiens signal sequence receptor,
alpha variant protein.
Length = 286
Score = 135 bits (326), Expect = 2e-31
Identities = 67/129 (51%), Positives = 86/129 (66%)
Frame = +1
Query: 196 DDALVDDDESVVKSSQDIDTTILFTKPVPSLGDLTFDIQAGYPVEFFVGFINKGSVDYVV 375
+D +D ++S DTTILF K G+ D A V+F VGF NKG+ D++V
Sbjct: 66 EDKEEEDVSGEPEASPSADTTILFVK-----GE---DFPANNIVKFLVGFTNKGTEDFIV 117
Query: 376 ESMEASFRYPMDYTYYIQNFTALPYNREVKPKQEATFAYSFIPNEAFAGRPFGLNVQLNY 555
ES++ASFRYP DY +YIQNFTALP N V P+++ATF YSFIP E GRPFGL + LNY
Sbjct: 118 ESLDASFRYPQDYQFYIQNFTALPLNTVVPPQRQATFEYSFIPAEPMGGRPFGLVINLNY 177
Query: 556 RDASGNAYQ 582
+D +GN +Q
Sbjct: 178 KDLNGNVFQ 186
Score = 42.3 bits (95), Expect = 0.002
Identities = 15/28 (53%), Positives = 24/28 (85%)
Frame = +2
Query: 581 REAVYNQTLNIVEVSEGLDGETFFLYVF 664
++AV+NQT+ ++E +GLDGET F+Y+F
Sbjct: 186 QDAVFNQTVTVIEREDGLDGETIFMYMF 213
>AK222762-1|BAD96482.1| 286|Homo sapiens signal sequence receptor,
alpha variant protein.
Length = 286
Score = 135 bits (326), Expect = 2e-31
Identities = 67/129 (51%), Positives = 86/129 (66%)
Frame = +1
Query: 196 DDALVDDDESVVKSSQDIDTTILFTKPVPSLGDLTFDIQAGYPVEFFVGFINKGSVDYVV 375
+D +D ++S DTTILF K G+ D A V+F VGF NKG+ D++V
Sbjct: 66 EDKEEEDVSGEPEASPSADTTILFVK-----GE---DFPANNIVKFLVGFTNKGTEDFIV 117
Query: 376 ESMEASFRYPMDYTYYIQNFTALPYNREVKPKQEATFAYSFIPNEAFAGRPFGLNVQLNY 555
ES++ASFRYP DY +YIQNFTALP N V P+++ATF YSFIP E GRPFGL + LNY
Sbjct: 118 ESLDASFRYPQDYQFYIQNFTALPLNTVVPPQRQATFEYSFIPAEPMGGRPFGLVINLNY 177
Query: 556 RDASGNAYQ 582
+D +GN +Q
Sbjct: 178 KDLNGNVFQ 186
Score = 42.3 bits (95), Expect = 0.002
Identities = 15/28 (53%), Positives = 24/28 (85%)
Frame = +2
Query: 581 REAVYNQTLNIVEVSEGLDGETFFLYVF 664
++AV+NQT+ ++E +GLDGET F+Y+F
Sbjct: 186 QDAVFNQTVTVIEREDGLDGETIFMYMF 213
>AF156965-1|AAD48778.1| 286|Homo sapiens translocon-associated
protein alpha subunit protein.
Length = 286
Score = 135 bits (326), Expect = 2e-31
Identities = 67/129 (51%), Positives = 86/129 (66%)
Frame = +1
Query: 196 DDALVDDDESVVKSSQDIDTTILFTKPVPSLGDLTFDIQAGYPVEFFVGFINKGSVDYVV 375
+D +D ++S DTTILF K G+ D A V+F VGF NKG+ D++V
Sbjct: 66 EDKEEEDVSGEPEASPSADTTILFVK-----GE---DFPANNIVKFLVGFTNKGTEDFIV 117
Query: 376 ESMEASFRYPMDYTYYIQNFTALPYNREVKPKQEATFAYSFIPNEAFAGRPFGLNVQLNY 555
ES++ASFRYP DY +YIQNFTALP N V P+++ATF YSFIP E GRPFGL + LNY
Sbjct: 118 ESLDASFRYPQDYQFYIQNFTALPLNTVVPPQRQATFEYSFIPAEPMGGRPFGLVINLNY 177
Query: 556 RDASGNAYQ 582
+D +GN +Q
Sbjct: 178 KDLNGNVFQ 186
Score = 42.3 bits (95), Expect = 0.002
Identities = 15/28 (53%), Positives = 24/28 (85%)
Frame = +2
Query: 581 REAVYNQTLNIVEVSEGLDGETFFLYVF 664
++AV+NQT+ ++E +GLDGET F+Y+F
Sbjct: 186 QDAVFNQTVTVIEREDGLDGETIFMYMF 213
>AK075562-1|BAC11701.1| 259|Homo sapiens protein ( Homo sapiens
cDNA PSEC0262 fis, clone NT2RP3004505, highly similar to
TRANSLOCON-ASSOCIATED PROTEIN, ALPHA SUBUNIT PRECURSOR.
).
Length = 259
Score = 134 bits (325), Expect = 2e-31
Identities = 66/127 (51%), Positives = 86/127 (67%), Gaps = 1/127 (0%)
Frame = +1
Query: 205 LVDDDESVVKSS-QDIDTTILFTKPVPSLGDLTFDIQAGYPVEFFVGFINKGSVDYVVES 381
L +D+E+V S +D D + P+ DL D A V+F VGF NKG+ D++VES
Sbjct: 35 LTEDEETVEDSIIEDEDDEAEVEEDEPT--DLVEDFPANNIVKFLVGFTNKGTEDFIVES 92
Query: 382 MEASFRYPMDYTYYIQNFTALPYNREVKPKQEATFAYSFIPNEAFAGRPFGLNVQLNYRD 561
++ASFRYP DY +YIQNFTALP N V P+++ATF YSFIP E GRPFGL + LNY+D
Sbjct: 93 LDASFRYPQDYQFYIQNFTALPLNTVVPPQRQATFEYSFIPAEPMGGRPFGLVINLNYKD 152
Query: 562 ASGNAYQ 582
+GN +Q
Sbjct: 153 LNGNVFQ 159
Score = 42.3 bits (95), Expect = 0.002
Identities = 15/28 (53%), Positives = 24/28 (85%)
Frame = +2
Query: 581 REAVYNQTLNIVEVSEGLDGETFFLYVF 664
++AV+NQT+ ++E +GLDGET F+Y+F
Sbjct: 159 QDAVFNQTVTVIEREDGLDGETIFMYMF 186
>AL139095-1|CAI16444.1| 286|Homo sapiens signal sequence receptor,
alpha (translocon-associated protein alpha) protein.
Length = 286
Score = 134 bits (324), Expect = 3e-31
Identities = 66/124 (53%), Positives = 84/124 (67%)
Frame = +1
Query: 211 DDDESVVKSSQDIDTTILFTKPVPSLGDLTFDIQAGYPVEFFVGFINKGSVDYVVESMEA 390
+D ++S DTTILF K G+ D A V+F VGF NKG+ D++VES++A
Sbjct: 71 EDVSGEPEASPSADTTILFVK-----GE---DFPANNIVKFLVGFTNKGTEDFIVESLDA 122
Query: 391 SFRYPMDYTYYIQNFTALPYNREVKPKQEATFAYSFIPNEAFAGRPFGLNVQLNYRDASG 570
SFRYP DY +YIQNFTALP N V P+++ATF YSFIP E GRPFGL + LNY+D +G
Sbjct: 123 SFRYPQDYQFYIQNFTALPLNTVVPPQRQATFEYSFIPAEPMGGRPFGLVINLNYKDLNG 182
Query: 571 NAYQ 582
N +Q
Sbjct: 183 NVFQ 186
Score = 42.3 bits (95), Expect = 0.002
Identities = 15/28 (53%), Positives = 24/28 (85%)
Frame = +2
Query: 581 REAVYNQTLNIVEVSEGLDGETFFLYVF 664
++AV+NQT+ ++E +GLDGET F+Y+F
Sbjct: 186 QDAVFNQTVTVIEREDGLDGETIFMYMF 213
>Z12830-1|CAA78290.1| 286|Homo sapiens SSR alpha subunit protein.
Length = 286
Score = 133 bits (321), Expect = 8e-31
Identities = 66/129 (51%), Positives = 86/129 (66%)
Frame = +1
Query: 196 DDALVDDDESVVKSSQDIDTTILFTKPVPSLGDLTFDIQAGYPVEFFVGFINKGSVDYVV 375
+D +D ++S DTTILF K G+ D A V+F VGF NKG+ D++V
Sbjct: 66 EDKEEEDVSGEPEASPSADTTILFVK-----GE---DFPANNIVKFLVGFTNKGTEDFIV 117
Query: 376 ESMEASFRYPMDYTYYIQNFTALPYNREVKPKQEATFAYSFIPNEAFAGRPFGLNVQLNY 555
ES++ASFRYP D+ +YIQNFTALP N V P+++ATF YSFIP E GRPFGL + LNY
Sbjct: 118 ESLDASFRYPQDHQFYIQNFTALPLNTVVPPQRQATFEYSFIPAEPMGGRPFGLVINLNY 177
Query: 556 RDASGNAYQ 582
+D +GN +Q
Sbjct: 178 KDLNGNVFQ 186
Score = 42.3 bits (95), Expect = 0.002
Identities = 15/28 (53%), Positives = 24/28 (85%)
Frame = +2
Query: 581 REAVYNQTLNIVEVSEGLDGETFFLYVF 664
++AV+NQT+ ++E +GLDGET F+Y+F
Sbjct: 186 QDAVFNQTVTVIEREDGLDGETIFMYMF 213
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 99,675,381
Number of Sequences: 237096
Number of extensions: 2034767
Number of successful extensions: 3122
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 3028
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3115
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9144232952
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -