Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-5901
         (761 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY069541-1|AAL39686.1|  302|Drosophila melanogaster LD26546p pro...   157   2e-38
AE014298-1340|AAF46502.1|  302|Drosophila melanogaster CG32701-P...   157   2e-38
BT001765-1|AAN71520.1|  402|Drosophila melanogaster RH09162p pro...    29   9.2  
AE014297-4550|AAN14220.1|  384|Drosophila melanogaster CG31030-P...    29   9.2  
AE014297-4549|ABI31219.1|  423|Drosophila melanogaster CG31030-P...    29   9.2  

>AY069541-1|AAL39686.1|  302|Drosophila melanogaster LD26546p
           protein.
          Length = 302

 Score =  157 bits (381), Expect = 2e-38
 Identities = 72/132 (54%), Positives = 98/132 (74%), Gaps = 1/132 (0%)
 Frame = +1

Query: 187 VVGDDALVDDDESVVKSSQ-DIDTTILFTKPVPSLGDLTFDIQAGYPVEFFVGFINKGSV 363
           V G+DA  D+D     SS  + DT +LFTKP+ + G    D+  G PVEF +GF NKG+ 
Sbjct: 47  VTGEDAEADEDSDTGSSSSPNADTYLLFTKPLYTPGQ-QLDLPGGKPVEFLIGFTNKGAE 105

Query: 364 DYVVESMEASFRYPMDYTYYIQNFTALPYNREVKPKQEATFAYSFIPNEAFAGRPFGLNV 543
           ++V+E++EASFRYPMD+ Y+IQNF+A+ YNREVKP  E+T +Y+F+P++ FAGRPFGLN+
Sbjct: 106 EFVIETVEASFRYPMDFNYFIQNFSAVAYNREVKPGFESTVSYTFLPSDQFAGRPFGLNI 165

Query: 544 QLNYRDASGNAY 579
            L YRDA+G  Y
Sbjct: 166 ALAYRDANGIQY 177



 Score = 45.2 bits (102), Expect = 1e-04
 Identities = 20/26 (76%), Positives = 23/26 (88%)
 Frame = +2

Query: 584 EAVYNQTLNIVEVSEGLDGETFFLYV 661
           EAV+N+T+ I EV EGLDGETFFLYV
Sbjct: 179 EAVFNETVLISEVDEGLDGETFFLYV 204


>AE014298-1340|AAF46502.1|  302|Drosophila melanogaster CG32701-PA
           protein.
          Length = 302

 Score =  157 bits (381), Expect = 2e-38
 Identities = 72/132 (54%), Positives = 98/132 (74%), Gaps = 1/132 (0%)
 Frame = +1

Query: 187 VVGDDALVDDDESVVKSSQ-DIDTTILFTKPVPSLGDLTFDIQAGYPVEFFVGFINKGSV 363
           V G+DA  D+D     SS  + DT +LFTKP+ + G    D+  G PVEF +GF NKG+ 
Sbjct: 47  VTGEDAEADEDSDTGSSSSPNADTYLLFTKPLYTPGQ-QLDLPGGKPVEFLIGFTNKGAE 105

Query: 364 DYVVESMEASFRYPMDYTYYIQNFTALPYNREVKPKQEATFAYSFIPNEAFAGRPFGLNV 543
           ++V+E++EASFRYPMD+ Y+IQNF+A+ YNREVKP  E+T +Y+F+P++ FAGRPFGLN+
Sbjct: 106 EFVIETVEASFRYPMDFNYFIQNFSAVAYNREVKPGFESTVSYTFLPSDQFAGRPFGLNI 165

Query: 544 QLNYRDASGNAY 579
            L YRDA+G  Y
Sbjct: 166 ALAYRDANGIQY 177



 Score = 45.2 bits (102), Expect = 1e-04
 Identities = 20/26 (76%), Positives = 23/26 (88%)
 Frame = +2

Query: 584 EAVYNQTLNIVEVSEGLDGETFFLYV 661
           EAV+N+T+ I EV EGLDGETFFLYV
Sbjct: 179 EAVFNETVLISEVDEGLDGETFFLYV 204


>BT001765-1|AAN71520.1|  402|Drosophila melanogaster RH09162p
           protein.
          Length = 402

 Score = 28.7 bits (61), Expect = 9.2
 Identities = 10/29 (34%), Positives = 17/29 (58%)
 Frame = +1

Query: 487 AYSFIPNEAFAGRPFGLNVQLNYRDASGN 573
           A++++P  + A  PFGLN  +     SG+
Sbjct: 106 AWTYLPQRSLAAEPFGLNANIEVVSLSGH 134


>AE014297-4550|AAN14220.1|  384|Drosophila melanogaster CG31030-PA,
           isoform A protein.
          Length = 384

 Score = 28.7 bits (61), Expect = 9.2
 Identities = 10/29 (34%), Positives = 17/29 (58%)
 Frame = +1

Query: 487 AYSFIPNEAFAGRPFGLNVQLNYRDASGN 573
           A++++P  + A  PFGLN  +     SG+
Sbjct: 88  AWTYLPQRSLAAEPFGLNANIEVVSLSGH 116


>AE014297-4549|ABI31219.1|  423|Drosophila melanogaster CG31030-PB,
           isoform B protein.
          Length = 423

 Score = 28.7 bits (61), Expect = 9.2
 Identities = 10/29 (34%), Positives = 17/29 (58%)
 Frame = +1

Query: 487 AYSFIPNEAFAGRPFGLNVQLNYRDASGN 573
           A++++P  + A  PFGLN  +     SG+
Sbjct: 88  AWTYLPQRSLAAEPFGLNANIEVVSLSGH 116


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,057,754
Number of Sequences: 53049
Number of extensions: 603351
Number of successful extensions: 1308
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1281
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1306
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3499501170
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)