Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-5899
(673 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC042617-1|AAH42617.1| 354|Homo sapiens retinaldehyde binding p... 131 3e-30
AY094971-1|AAM15733.1| 354|Homo sapiens cellular retinaldehyde-... 131 3e-30
BC101377-1|AAI01378.1| 327|Homo sapiens retinaldehyde binding p... 130 3e-30
BC101376-1|AAI01377.1| 327|Homo sapiens retinaldehyde binding p... 130 3e-30
AL591428-2|CAI12306.1| 327|Homo sapiens protein ( to hypothetic... 130 3e-30
L34219-1|AAA65123.1| 317|Homo sapiens retinaldehyde-binding pro... 105 1e-22
J04213-1|AAA60251.1| 317|Homo sapiens RLBP1 protein. 105 1e-22
BC004199-1|AAH04199.1| 317|Homo sapiens retinaldehyde binding p... 105 1e-22
Z97053-6|CAI19686.1| 342|Homo sapiens chromosome 20 open readin... 88 3e-17
BC003071-1|AAH03071.2| 342|Homo sapiens chromosome 20 open read... 88 3e-17
AL132772-9|CAI18861.1| 342|Homo sapiens chromosome 20 open read... 88 3e-17
U21938-1|AAA64309.1| 278|Homo sapiens alpha-tocopherol transfer... 79 1e-14
D49488-1|BAA08449.1| 278|Homo sapiens alpha-tocopherol transfer... 79 1e-14
BC058000-1|AAH58000.1| 278|Homo sapiens tocopherol (alpha) tran... 79 1e-14
AK091641-1|BAC03711.1| 167|Homo sapiens protein ( Homo sapiens ... 74 4e-13
Z97053-5|CAI19685.1| 279|Homo sapiens chromosome 20 open readin... 66 1e-10
AL132772-8|CAI18860.1| 279|Homo sapiens chromosome 20 open read... 66 1e-10
AL591428-3|CAI12307.1| 181|Homo sapiens protein ( to hypothetic... 53 1e-06
Z97053-4|CAO03543.1| 154|Homo sapiens chromosome 20 open readin... 50 1e-05
AL132772-7|CAO03334.1| 154|Homo sapiens chromosome 20 open read... 50 1e-05
M83738-1|AAA60226.1| 593|Homo sapiens protein-tyrosine phosphat... 46 1e-04
BT007405-1|AAP36073.1| 593|Homo sapiens protein tyrosine phosph... 46 1e-04
BC010863-1|AAH10863.1| 593|Homo sapiens protein tyrosine phosph... 46 1e-04
BC071574-1|AAH71574.1| 583|Homo sapiens PTPN9 protein protein. 46 2e-04
AF031324-1|AAC67490.1| 119|Homo sapiens alpha-tocopherol transf... 43 9e-04
D79992-1|BAA11487.2| 2090|Homo sapiens KIAA0170 protein. 33 1.2
BX248307-2|CAM25929.1| 2089|Homo sapiens mediator of DNA damage ... 33 1.2
BC082974-1|AAH82974.1| 1151|Homo sapiens PLEKHG4 protein protein. 33 1.2
BC063501-1|AAH63501.1| 1191|Homo sapiens PLEKHG4 protein protein. 33 1.2
BA000025-70|BAB63322.1| 2090|Homo sapiens KIAA0170 protein. 33 1.2
AL845353-22|CAI41891.1| 2089|Homo sapiens mediator of DNA damage... 33 1.2
AL845353-21|CAI41890.1| 1244|Homo sapiens mediator of DNA damage... 33 1.2
AL662848-3|CAI17440.1| 2089|Homo sapiens mediator of DNA damage ... 33 1.2
AL662797-7|CAI18195.1| 2089|Homo sapiens mediator of DNA damage ... 33 1.2
AK024475-1|BAB15765.1| 1194|Homo sapiens FLJ00068 protein protein. 33 1.2
AB197663-1|BAE07054.1| 1191|Homo sapiens puratrophin-1 protein. 33 1.2
AB103605-1|BAF31266.1| 2089|Homo sapiens KIAA0170 protein protein. 33 1.2
AB088099-1|BAC54931.1| 2089|Homo sapiens homologue to Drosophila... 33 1.2
BC051719-1|AAH51719.1| 304|Homo sapiens B3GALT6 protein protein. 30 6.6
AY050570-1|AAL11442.1| 329|Homo sapiens beta-1,3-galactosyltran... 30 6.6
AL162741-12|CAI23255.1| 329|Homo sapiens UDP-Gal:betaGal beta 1... 30 6.6
AF488691-1|AAN45858.1| 1004|Homo sapiens friend of GATA-1 protein. 30 6.6
AB202097-1|BAE78617.1| 2089|Homo sapiens mediator of DNA damage ... 30 6.6
U43586-1|AAC50354.1| 635|Homo sapiens KSR1 protein. 30 8.7
AY335946-1|AAQ16552.1| 445|Homo sapiens homeodomain protein IRX... 30 8.7
AY335937-1|AAQ16543.1| 445|Homo sapiens homeodomain protein IRX... 30 8.7
AK125053-1|BAC86033.1| 446|Homo sapiens protein ( Homo sapiens ... 30 8.7
>BC042617-1|AAH42617.1| 354|Homo sapiens retinaldehyde binding
protein 1-like 1 protein.
Length = 354
Score = 131 bits (316), Expect = 3e-30
Identities = 63/145 (43%), Positives = 92/145 (63%), Gaps = 3/145 (2%)
Frame = +2
Query: 248 DDNFLRRFLYARKHDVQQSFELLVRYHQYRREHDELWASA---DGGVLRALADGLPGVLA 418
DD F+ RFL ARK +F LL +Y QYR+ + +++ + D G+ RAL DG PGVL
Sbjct: 72 DDAFILRFLRARKFHQADAFRLLAQYFQYRQLNLDMFKNFKADDPGIKRALIDGFPGVLE 131
Query: 419 QRDRRGRCVLLVFASNWSPQACSLISVFRALLLTIERTLRDIQNQANGYVIIVDWTEFTF 598
RD GR +LL+FA+NW S + RA+LL++E + D + Q NG+++I+DW+ F+F
Sbjct: 132 NRDHYGRKILLLFAANWDQSRNSFTDILRAILLSLEVLIEDPELQINGFILIIDWSNFSF 191
Query: 599 KQSCSLQAKVLKMMIDCLQDCMPVR 673
KQ+ L +LK+ I+ LQD P R
Sbjct: 192 KQASKLTPSILKLAIEGLQDSFPAR 216
>AY094971-1|AAM15733.1| 354|Homo sapiens cellular
retinaldehyde-binding protein-like protein protein.
Length = 354
Score = 131 bits (316), Expect = 3e-30
Identities = 63/145 (43%), Positives = 92/145 (63%), Gaps = 3/145 (2%)
Frame = +2
Query: 248 DDNFLRRFLYARKHDVQQSFELLVRYHQYRREHDELWASA---DGGVLRALADGLPGVLA 418
DD F+ RFL ARK +F LL +Y QYR+ + +++ + D G+ RAL DG PGVL
Sbjct: 72 DDAFILRFLRARKFHQADAFRLLAQYFQYRQLNLDMFKNFKADDPGIKRALIDGFPGVLE 131
Query: 419 QRDRRGRCVLLVFASNWSPQACSLISVFRALLLTIERTLRDIQNQANGYVIIVDWTEFTF 598
RD GR +LL+FA+NW S + RA+LL++E + D + Q NG+++I+DW+ F+F
Sbjct: 132 NRDHYGRKILLLFAANWDQSRNSFTDILRAILLSLEVLIEDPELQINGFILIIDWSNFSF 191
Query: 599 KQSCSLQAKVLKMMIDCLQDCMPVR 673
KQ+ L +LK+ I+ LQD P R
Sbjct: 192 KQASKLTPSILKLAIEGLQDSFPAR 216
>BC101377-1|AAI01378.1| 327|Homo sapiens retinaldehyde binding
protein 1-like 2 protein.
Length = 327
Score = 130 bits (315), Expect = 3e-30
Identities = 61/145 (42%), Positives = 95/145 (65%), Gaps = 3/145 (2%)
Frame = +2
Query: 248 DDNFLRRFLYARKHDVQQSFELLVRYHQYRREHDELWAS---ADGGVLRALADGLPGVLA 418
DD F+ RFL ARK ++F LL +Y +YR+++ +++ S D G+ +AL DG PG LA
Sbjct: 50 DDAFILRFLRARKFHHFEAFRLLAQYFEYRQQNLDMFKSFKATDPGIKQALKDGFPGGLA 109
Query: 419 QRDRRGRCVLLVFASNWSPQACSLISVFRALLLTIERTLRDIQNQANGYVIIVDWTEFTF 598
D GR +L++FA+NW +L+ + RA+LL++E + D + Q NG+V+I+DW+ FTF
Sbjct: 110 NLDHYGRKILVLFAANWDQSRYTLVDILRAILLSLEAMIEDPELQVNGFVLIIDWSNFTF 169
Query: 599 KQSCSLQAKVLKMMIDCLQDCMPVR 673
KQ+ L +L++ I+ LQD P R
Sbjct: 170 KQASKLTPSMLRLAIEGLQDSFPAR 194
>BC101376-1|AAI01377.1| 327|Homo sapiens retinaldehyde binding
protein 1-like 2 protein.
Length = 327
Score = 130 bits (315), Expect = 3e-30
Identities = 61/145 (42%), Positives = 95/145 (65%), Gaps = 3/145 (2%)
Frame = +2
Query: 248 DDNFLRRFLYARKHDVQQSFELLVRYHQYRREHDELWAS---ADGGVLRALADGLPGVLA 418
DD F+ RFL ARK ++F LL +Y +YR+++ +++ S D G+ +AL DG PG LA
Sbjct: 50 DDAFILRFLRARKFHHFEAFRLLAQYFEYRQQNLDMFKSFKATDPGIKQALKDGFPGGLA 109
Query: 419 QRDRRGRCVLLVFASNWSPQACSLISVFRALLLTIERTLRDIQNQANGYVIIVDWTEFTF 598
D GR +L++FA+NW +L+ + RA+LL++E + D + Q NG+V+I+DW+ FTF
Sbjct: 110 NLDHYGRKILVLFAANWDQSRYTLVDILRAILLSLEAMIEDPELQVNGFVLIIDWSNFTF 169
Query: 599 KQSCSLQAKVLKMMIDCLQDCMPVR 673
KQ+ L +L++ I+ LQD P R
Sbjct: 170 KQASKLTPSMLRLAIEGLQDSFPAR 194
>AL591428-2|CAI12306.1| 327|Homo sapiens protein ( to hypothetical
proteins from ).).
Length = 327
Score = 130 bits (315), Expect = 3e-30
Identities = 61/145 (42%), Positives = 95/145 (65%), Gaps = 3/145 (2%)
Frame = +2
Query: 248 DDNFLRRFLYARKHDVQQSFELLVRYHQYRREHDELWAS---ADGGVLRALADGLPGVLA 418
DD F+ RFL ARK ++F LL +Y +YR+++ +++ S D G+ +AL DG PG LA
Sbjct: 50 DDAFILRFLRARKFHHFEAFRLLAQYFEYRQQNLDMFKSFKATDPGIKQALKDGFPGGLA 109
Query: 419 QRDRRGRCVLLVFASNWSPQACSLISVFRALLLTIERTLRDIQNQANGYVIIVDWTEFTF 598
D GR +L++FA+NW +L+ + RA+LL++E + D + Q NG+V+I+DW+ FTF
Sbjct: 110 NLDHYGRKILVLFAANWDQSRYTLVDILRAILLSLEAMIEDPELQVNGFVLIIDWSNFTF 169
Query: 599 KQSCSLQAKVLKMMIDCLQDCMPVR 673
KQ+ L +L++ I+ LQD P R
Sbjct: 170 KQASKLTPSMLRLAIEGLQDSFPAR 194
>L34219-1|AAA65123.1| 317|Homo sapiens retinaldehyde-binding
protein protein.
Length = 317
Score = 105 bits (252), Expect = 1e-22
Identities = 62/193 (32%), Positives = 105/193 (54%), Gaps = 4/193 (2%)
Frame = +2
Query: 107 HQMQNERLCEVTRKRLTDGDRQRALLGLKEAVDSS---LNLALRDKSRCQDDNFLRRFLY 277
H +Q + E+ + T + R L + +A +S L +A+ ++ + +D F RF+
Sbjct: 43 HTLQKAK-DELNEREETREEAVRELQEMVQAQAASGEELAVAVAERVQEKDSGFFLRFIR 101
Query: 278 ARKHDVQQSFELLVRYHQYRREHDELWASADGGVLRALAD-GLPGVLAQRDRRGRCVLLV 454
ARK +V +++ELL Y +R ++ EL+ S +R + G PGVL+ RD+ GR V+L
Sbjct: 102 ARKFNVGRAYELLRGYVNFRLQYPELFDSLSPEAVRCTIEAGYPGVLSSRDKYGRVVMLF 161
Query: 455 FASNWSPQACSLISVFRALLLTIERTLRDIQNQANGYVIIVDWTEFTFKQSCSLQAKVLK 634
NW Q + + +A +E+ L + + Q NG+ II ++ FT +Q+ SL+ L+
Sbjct: 162 NIENWQSQEITFDEILQAYCFILEKLLENEETQINGFCIIENFKGFTMQQAASLRTSDLR 221
Query: 635 MMIDCLQDCMPVR 673
M+D LQD P R
Sbjct: 222 KMVDMLQDSFPAR 234
>J04213-1|AAA60251.1| 317|Homo sapiens RLBP1 protein.
Length = 317
Score = 105 bits (252), Expect = 1e-22
Identities = 62/193 (32%), Positives = 105/193 (54%), Gaps = 4/193 (2%)
Frame = +2
Query: 107 HQMQNERLCEVTRKRLTDGDRQRALLGLKEAVDSS---LNLALRDKSRCQDDNFLRRFLY 277
H +Q + E+ + T + R L + +A +S L +A+ ++ + +D F RF+
Sbjct: 43 HTLQKAK-DELNEREETREEAVRELQEMVQAQAASGEELAVAVAERVQEKDSGFFLRFIR 101
Query: 278 ARKHDVQQSFELLVRYHQYRREHDELWASADGGVLRALAD-GLPGVLAQRDRRGRCVLLV 454
ARK +V +++ELL Y +R ++ EL+ S +R + G PGVL+ RD+ GR V+L
Sbjct: 102 ARKFNVGRAYELLRGYVNFRLQYPELFDSLSPEAVRCTIEAGYPGVLSSRDKYGRVVMLF 161
Query: 455 FASNWSPQACSLISVFRALLLTIERTLRDIQNQANGYVIIVDWTEFTFKQSCSLQAKVLK 634
NW Q + + +A +E+ L + + Q NG+ II ++ FT +Q+ SL+ L+
Sbjct: 162 NIENWQSQEITFDEILQAYCFILEKLLENEETQINGFCIIENFKGFTMQQAASLRTSDLR 221
Query: 635 MMIDCLQDCMPVR 673
M+D LQD P R
Sbjct: 222 KMVDMLQDSFPAR 234
>BC004199-1|AAH04199.1| 317|Homo sapiens retinaldehyde binding
protein 1 protein.
Length = 317
Score = 105 bits (252), Expect = 1e-22
Identities = 62/193 (32%), Positives = 105/193 (54%), Gaps = 4/193 (2%)
Frame = +2
Query: 107 HQMQNERLCEVTRKRLTDGDRQRALLGLKEAVDSS---LNLALRDKSRCQDDNFLRRFLY 277
H +Q + E+ + T + R L + +A +S L +A+ ++ + +D F RF+
Sbjct: 43 HTLQKAK-DELNEREETREEAVRELQEMVQAQAASGEELAVAVAERVQEKDSGFFLRFIR 101
Query: 278 ARKHDVQQSFELLVRYHQYRREHDELWASADGGVLRALAD-GLPGVLAQRDRRGRCVLLV 454
ARK +V +++ELL Y +R ++ EL+ S +R + G PGVL+ RD+ GR V+L
Sbjct: 102 ARKFNVGRAYELLRGYVNFRLQYPELFDSLSPEAVRCTIEAGYPGVLSSRDKYGRVVMLF 161
Query: 455 FASNWSPQACSLISVFRALLLTIERTLRDIQNQANGYVIIVDWTEFTFKQSCSLQAKVLK 634
NW Q + + +A +E+ L + + Q NG+ II ++ FT +Q+ SL+ L+
Sbjct: 162 NIENWQSQEITFDEILQAYCFILEKLLENEETQINGFCIIENFKGFTMQQAASLRTSDLR 221
Query: 635 MMIDCLQDCMPVR 673
M+D LQD P R
Sbjct: 222 KMVDMLQDSFPAR 234
>Z97053-6|CAI19686.1| 342|Homo sapiens chromosome 20 open reading
frame 121 protein.
Length = 342
Score = 87.8 bits (208), Expect = 3e-17
Identities = 49/143 (34%), Positives = 73/143 (51%), Gaps = 1/143 (0%)
Frame = +2
Query: 248 DDNFLRRFLYARKHDVQQSFELLVRYHQYRREHDELWASADGGVLR-ALADGLPGVLAQR 424
DD FL RFL ARK D ++ +LLV YH RR E++ + L+ LA G VL
Sbjct: 77 DDAFLLRFLRARKFDYDRALQLLVNYHSCRRSWPEVFNNLKPSALKDVLASGFLTVLPHT 136
Query: 425 DRRGRCVLLVFASNWSPQACSLISVFRALLLTIERTLRDIQNQANGYVIIVDWTEFTFKQ 604
D RG V+ + W P + RA+ LT+E+ ++ + Q NG VI+ D+ + +
Sbjct: 137 DPRGCHVVCIRPDRWIPSNYPITENIRAIYLTLEKLIQSEETQVNGIVILADYKGVSLSK 196
Query: 605 SCSLQAKVLKMMIDCLQDCMPVR 673
+ + K +I LQD P+R
Sbjct: 197 ASHFGPFIAKKVIGILQDGFPIR 219
>BC003071-1|AAH03071.2| 342|Homo sapiens chromosome 20 open reading
frame 121 protein.
Length = 342
Score = 87.8 bits (208), Expect = 3e-17
Identities = 49/143 (34%), Positives = 73/143 (51%), Gaps = 1/143 (0%)
Frame = +2
Query: 248 DDNFLRRFLYARKHDVQQSFELLVRYHQYRREHDELWASADGGVLR-ALADGLPGVLAQR 424
DD FL RFL ARK D ++ +LLV YH RR E++ + L+ LA G VL
Sbjct: 77 DDAFLLRFLRARKFDYDRALQLLVNYHSCRRSWPEVFNNLKPSALKDVLASGFLTVLPHT 136
Query: 425 DRRGRCVLLVFASNWSPQACSLISVFRALLLTIERTLRDIQNQANGYVIIVDWTEFTFKQ 604
D RG V+ + W P + RA+ LT+E+ ++ + Q NG VI+ D+ + +
Sbjct: 137 DPRGCHVVCIRPDRWIPSNYPITENIRAIYLTLEKLIQSEETQVNGIVILADYKGVSLSK 196
Query: 605 SCSLQAKVLKMMIDCLQDCMPVR 673
+ + K +I LQD P+R
Sbjct: 197 ASHFGPFIAKKVIGILQDGFPIR 219
>AL132772-9|CAI18861.1| 342|Homo sapiens chromosome 20 open reading
frame 121 protein.
Length = 342
Score = 87.8 bits (208), Expect = 3e-17
Identities = 49/143 (34%), Positives = 73/143 (51%), Gaps = 1/143 (0%)
Frame = +2
Query: 248 DDNFLRRFLYARKHDVQQSFELLVRYHQYRREHDELWASADGGVLR-ALADGLPGVLAQR 424
DD FL RFL ARK D ++ +LLV YH RR E++ + L+ LA G VL
Sbjct: 77 DDAFLLRFLRARKFDYDRALQLLVNYHSCRRSWPEVFNNLKPSALKDVLASGFLTVLPHT 136
Query: 425 DRRGRCVLLVFASNWSPQACSLISVFRALLLTIERTLRDIQNQANGYVIIVDWTEFTFKQ 604
D RG V+ + W P + RA+ LT+E+ ++ + Q NG VI+ D+ + +
Sbjct: 137 DPRGCHVVCIRPDRWIPSNYPITENIRAIYLTLEKLIQSEETQVNGIVILADYKGVSLSK 196
Query: 605 SCSLQAKVLKMMIDCLQDCMPVR 673
+ + K +I LQD P+R
Sbjct: 197 ASHFGPFIAKKVIGILQDGFPIR 219
>U21938-1|AAA64309.1| 278|Homo sapiens alpha-tocopherol transfer
protein protein.
Length = 278
Score = 79.0 bits (186), Expect = 1e-14
Identities = 45/142 (31%), Positives = 72/142 (50%), Gaps = 1/142 (0%)
Frame = +2
Query: 251 DNFLRRFLYARKHDVQQSFELLVRYHQYRREHDELWASADG-GVLRALADGLPGVLAQRD 427
D+FL RFL AR D+ ++ LL Y+++R E E+ A ++ L G GVL RD
Sbjct: 49 DSFLLRFLRARDFDLDLAWRLLKNYYKWRAECPEISADLHPRSIIGLLKAGYHGVLRSRD 108
Query: 428 RRGRCVLLVFASNWSPQACSLISVFRALLLTIERTLRDIQNQANGYVIIVDWTEFTFKQS 607
G VL+ ++W P+ + VFR L+T E +++++ Q NG I D + F +
Sbjct: 109 PTGSKVLIYRIAHWDPKVFTAYDVFRVSLITSELIVQEVETQRNGIKAIFDLEGWQFSHA 168
Query: 608 CSLQAKVLKMMIDCLQDCMPVR 673
+ V K + L D P++
Sbjct: 169 FQITPSVAKKIAAVLTDSFPLK 190
>D49488-1|BAA08449.1| 278|Homo sapiens alpha-tocopherol transfer
protein protein.
Length = 278
Score = 79.0 bits (186), Expect = 1e-14
Identities = 45/142 (31%), Positives = 72/142 (50%), Gaps = 1/142 (0%)
Frame = +2
Query: 251 DNFLRRFLYARKHDVQQSFELLVRYHQYRREHDELWASADG-GVLRALADGLPGVLAQRD 427
D+FL RFL AR D+ ++ LL Y+++R E E+ A ++ L G GVL RD
Sbjct: 49 DSFLLRFLRARDFDLDLAWRLLKNYYKWRAECPEISADLHPRSIIGLLKAGYHGVLRSRD 108
Query: 428 RRGRCVLLVFASNWSPQACSLISVFRALLLTIERTLRDIQNQANGYVIIVDWTEFTFKQS 607
G VL+ ++W P+ + VFR L+T E +++++ Q NG I D + F +
Sbjct: 109 PTGSKVLIYRIAHWDPKVFTAYDVFRVSLITSELIVQEVETQRNGIKAIFDLEGWQFSHA 168
Query: 608 CSLQAKVLKMMIDCLQDCMPVR 673
+ V K + L D P++
Sbjct: 169 FQITPSVAKKIAAVLTDSFPLK 190
>BC058000-1|AAH58000.1| 278|Homo sapiens tocopherol (alpha)
transfer protein protein.
Length = 278
Score = 79.0 bits (186), Expect = 1e-14
Identities = 45/142 (31%), Positives = 72/142 (50%), Gaps = 1/142 (0%)
Frame = +2
Query: 251 DNFLRRFLYARKHDVQQSFELLVRYHQYRREHDELWASADG-GVLRALADGLPGVLAQRD 427
D+FL RFL AR D+ ++ LL Y+++R E E+ A ++ L G GVL RD
Sbjct: 49 DSFLLRFLRARDFDLDLAWRLLKNYYKWRAECPEISADLHPRSIIGLLKAGYHGVLRSRD 108
Query: 428 RRGRCVLLVFASNWSPQACSLISVFRALLLTIERTLRDIQNQANGYVIIVDWTEFTFKQS 607
G VL+ ++W P+ + VFR L+T E +++++ Q NG I D + F +
Sbjct: 109 PTGSKVLIYRIAHWDPKVFTAYDVFRVSLITSELIVQEVETQRNGIKAIFDLEGWQFSHA 168
Query: 608 CSLQAKVLKMMIDCLQDCMPVR 673
+ V K + L D P++
Sbjct: 169 FQITPSVAKKIAAVLTDSFPLK 190
>AK091641-1|BAC03711.1| 167|Homo sapiens protein ( Homo sapiens
cDNA FLJ34322 fis, clone FEBRA2008861, weakly similar to
CELLULAR RETINALDEHYDE-BINDING PROTEIN. ).
Length = 167
Score = 74.1 bits (174), Expect = 4e-13
Identities = 39/86 (45%), Positives = 53/86 (61%), Gaps = 3/86 (3%)
Frame = +2
Query: 248 DDNFLRRFLYARKHDVQQSFELLVRYHQYRREHDELWASA---DGGVLRALADGLPGVLA 418
DD F+ RFL ARK +F LL +Y QYR+ + +++ + D G+ RAL DG PGVL
Sbjct: 72 DDAFILRFLRARKFHQADAFRLLAQYFQYRQLNLDMFKNFKADDPGIKRALIDGFPGVLE 131
Query: 419 QRDRRGRCVLLVFASNWSPQACSLIS 496
RD GR +LL+FA+NW + S S
Sbjct: 132 NRDHYGRKILLLFAANWDQRTPSQTS 157
>Z97053-5|CAI19685.1| 279|Homo sapiens chromosome 20 open reading
frame 121 protein.
Length = 279
Score = 65.7 bits (153), Expect = 1e-10
Identities = 39/109 (35%), Positives = 57/109 (52%), Gaps = 1/109 (0%)
Frame = +2
Query: 248 DDNFLRRFLYARKHDVQQSFELLVRYHQYRREHDELWASADGGVLR-ALADGLPGVLAQR 424
DD FL RFL ARK D ++ +LLV YH RR E++ + L+ LA G VL
Sbjct: 77 DDAFLLRFLRARKFDYDRALQLLVNYHSCRRSWPEVFNNLKPSALKDVLASGFLTVLPHT 136
Query: 425 DRRGRCVLLVFASNWSPQACSLISVFRALLLTIERTLRDIQNQANGYVI 571
D RG V+ + W P + RA+ LT+E+ ++ + Q +G+ I
Sbjct: 137 DPRGCHVVCIRPDRWIPSNYPITENIRAIYLTLEKLIQSEETQ-DGFPI 184
>AL132772-8|CAI18860.1| 279|Homo sapiens chromosome 20 open reading
frame 121 protein.
Length = 279
Score = 65.7 bits (153), Expect = 1e-10
Identities = 39/109 (35%), Positives = 57/109 (52%), Gaps = 1/109 (0%)
Frame = +2
Query: 248 DDNFLRRFLYARKHDVQQSFELLVRYHQYRREHDELWASADGGVLR-ALADGLPGVLAQR 424
DD FL RFL ARK D ++ +LLV YH RR E++ + L+ LA G VL
Sbjct: 77 DDAFLLRFLRARKFDYDRALQLLVNYHSCRRSWPEVFNNLKPSALKDVLASGFLTVLPHT 136
Query: 425 DRRGRCVLLVFASNWSPQACSLISVFRALLLTIERTLRDIQNQANGYVI 571
D RG V+ + W P + RA+ LT+E+ ++ + Q +G+ I
Sbjct: 137 DPRGCHVVCIRPDRWIPSNYPITENIRAIYLTLEKLIQSEETQ-DGFPI 184
>AL591428-3|CAI12307.1| 181|Homo sapiens protein ( to hypothetical
proteins from ).).
Length = 181
Score = 52.8 bits (121), Expect = 1e-06
Identities = 21/47 (44%), Positives = 32/47 (68%)
Frame = +2
Query: 533 LRDIQNQANGYVIIVDWTEFTFKQSCSLQAKVLKMMIDCLQDCMPVR 673
+ D + Q NG+V+I+DW+ FTFKQ+ L +L++ I+ LQD P R
Sbjct: 2 IEDPELQVNGFVLIIDWSNFTFKQASKLTPSMLRLAIEGLQDSFPAR 48
>Z97053-4|CAO03543.1| 154|Homo sapiens chromosome 20 open reading
frame 121 protein.
Length = 154
Score = 49.6 bits (113), Expect = 1e-05
Identities = 29/70 (41%), Positives = 38/70 (54%), Gaps = 1/70 (1%)
Frame = +2
Query: 248 DDNFLRRFLYARKHDVQQSFELLVRYHQYRREHDELWASADGGVLR-ALADGLPGVLAQR 424
DD FL RFL ARK D ++ +LLV YH RR E++ + L+ LA G VL
Sbjct: 77 DDAFLLRFLRARKFDYDRALQLLVNYHSCRRSWPEVFNNLKPSALKDVLASGFLTVLPHT 136
Query: 425 DRRGRCVLLV 454
D RG V+ +
Sbjct: 137 DPRGCHVVCI 146
>AL132772-7|CAO03334.1| 154|Homo sapiens chromosome 20 open reading
frame 121 protein.
Length = 154
Score = 49.6 bits (113), Expect = 1e-05
Identities = 29/70 (41%), Positives = 38/70 (54%), Gaps = 1/70 (1%)
Frame = +2
Query: 248 DDNFLRRFLYARKHDVQQSFELLVRYHQYRREHDELWASADGGVLR-ALADGLPGVLAQR 424
DD FL RFL ARK D ++ +LLV YH RR E++ + L+ LA G VL
Sbjct: 77 DDAFLLRFLRARKFDYDRALQLLVNYHSCRRSWPEVFNNLKPSALKDVLASGFLTVLPHT 136
Query: 425 DRRGRCVLLV 454
D RG V+ +
Sbjct: 137 DPRGCHVVCI 146
>M83738-1|AAA60226.1| 593|Homo sapiens protein-tyrosine phosphatase
protein.
Length = 593
Score = 46.0 bits (104), Expect = 1e-04
Identities = 37/141 (26%), Positives = 60/141 (42%), Gaps = 1/141 (0%)
Frame = +2
Query: 254 NFLRRFLYARKHDVQQSFELLVRYHQYRREHDELWASADGGVLRA-LADGLPGVLAQRDR 430
N +FL ARK DV ++ EL Y + RR+ + LR+ + G +L RD
Sbjct: 45 NVAVKFLMARKFDVLRAIELFHSYRETRRKEGIVKLKPHEEPLRSEILSGKFTILNVRDP 104
Query: 431 RGRCVLLVFASNWSPQACSLISVFRALLLTIERTLRDIQNQANGYVIIVDWTEFTFKQSC 610
G + L A P V +AL ++R + + Q NG V I D +
Sbjct: 105 TGASIALFTARLHHPHKSVQHVVLQALFYLLDRAVDSFETQRNGLVFIYDMCGSNY---A 161
Query: 611 SLQAKVLKMMIDCLQDCMPVR 673
+ + + K +++ L+ P R
Sbjct: 162 NFELDLGKKVLNLLKGAFPAR 182
>BT007405-1|AAP36073.1| 593|Homo sapiens protein tyrosine
phosphatase, non-receptor type 9 protein.
Length = 593
Score = 46.0 bits (104), Expect = 1e-04
Identities = 37/141 (26%), Positives = 60/141 (42%), Gaps = 1/141 (0%)
Frame = +2
Query: 254 NFLRRFLYARKHDVQQSFELLVRYHQYRREHDELWASADGGVLRA-LADGLPGVLAQRDR 430
N +FL ARK DV ++ EL Y + RR+ + LR+ + G +L RD
Sbjct: 45 NVAVKFLMARKFDVLRAIELFHSYRETRRKEGIVKLKPHEEPLRSEILSGKFTILNVRDP 104
Query: 431 RGRCVLLVFASNWSPQACSLISVFRALLLTIERTLRDIQNQANGYVIIVDWTEFTFKQSC 610
G + L A P V +AL ++R + + Q NG V I D +
Sbjct: 105 TGASIALFTARLHHPHKSVQHVVLQALFYLLDRAVDSFETQRNGLVFIYDMCGSNY---A 161
Query: 611 SLQAKVLKMMIDCLQDCMPVR 673
+ + + K +++ L+ P R
Sbjct: 162 NFELDLGKKVLNLLKGAFPAR 182
>BC010863-1|AAH10863.1| 593|Homo sapiens protein tyrosine
phosphatase, non-receptor type 9 protein.
Length = 593
Score = 46.0 bits (104), Expect = 1e-04
Identities = 37/141 (26%), Positives = 60/141 (42%), Gaps = 1/141 (0%)
Frame = +2
Query: 254 NFLRRFLYARKHDVQQSFELLVRYHQYRREHDELWASADGGVLRA-LADGLPGVLAQRDR 430
N +FL ARK DV ++ EL Y + RR+ + LR+ + G +L RD
Sbjct: 45 NVAVKFLMARKFDVLRAIELFHSYRETRRKEGIVKLKPHEEPLRSEILSGKFTILNVRDP 104
Query: 431 RGRCVLLVFASNWSPQACSLISVFRALLLTIERTLRDIQNQANGYVIIVDWTEFTFKQSC 610
G + L A P V +AL ++R + + Q NG V I D +
Sbjct: 105 TGASIALFTARLHHPHKSVQHVVLQALFYLLDRAVDSFETQRNGLVFIYDMCGSNY---A 161
Query: 611 SLQAKVLKMMIDCLQDCMPVR 673
+ + + K +++ L+ P R
Sbjct: 162 NFELDLGKKVLNLLKGAFPAR 182
>BC071574-1|AAH71574.1| 583|Homo sapiens PTPN9 protein protein.
Length = 583
Score = 45.6 bits (103), Expect = 2e-04
Identities = 37/131 (28%), Positives = 55/131 (41%), Gaps = 2/131 (1%)
Frame = +2
Query: 254 NFLRRFLYARKHDVQQSFELLVRYHQYRREHDELWASADGGVLRA-LADGLPGVLAQRDR 430
N +FL ARK DV ++ EL Y + RR+ + LR+ + G +L RD
Sbjct: 35 NVAVKFLMARKFDVLRAIELFHSYRETRRKEGIVKLKPHEEPLRSEILSGKFTILNVRDP 94
Query: 431 RGRCVLLVFASNWSPQACSLISVFRALLLTIERTLRDIQNQANGYVIIVDWTEFTFKQ-S 607
G + L A P V +AL ++R + + Q NG V I D +
Sbjct: 95 TGASIALFTARLHHPHKSVQHVVLQALFYLLDRAVDSFETQRNGLVFIYDMCGSNYADFE 154
Query: 608 CSLQAKVLKMM 640
L KVL ++
Sbjct: 155 LDLGKKVLNLL 165
>AF031324-1|AAC67490.1| 119|Homo sapiens alpha-tocopherol transfer
protein protein.
Length = 119
Score = 43.2 bits (97), Expect = 9e-04
Identities = 26/68 (38%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Frame = +2
Query: 251 DNFLRRFLYARKHDVQQSFELLVRYHQYRREHDELWASA-DGGVLRALADGLPGVLAQRD 427
D+FL RFL AR D+ ++ LL Y+++R E E+ A ++ L G GVL RD
Sbjct: 49 DSFLLRFLRARDFDLDLAWRLLKNYYKWRAECPEISADLHPRSIIGLLKAGYHGVLRSRD 108
Query: 428 RRGRCVLL 451
G VL+
Sbjct: 109 PTGSKVLI 116
>D79992-1|BAA11487.2| 2090|Homo sapiens KIAA0170 protein.
Length = 2090
Score = 32.7 bits (71), Expect = 1.2
Identities = 20/61 (32%), Positives = 28/61 (45%)
Frame = -3
Query: 476 EETNSRRTRGAHSARVYPVVPTHPATRRRALVTRPRLPKPTARHVPADIDDNEPKARNSV 297
+ T R+ R + PVVPT P R RP PKPT+R + + + K +V
Sbjct: 1268 QATRGRKNRSSVKTPE-PVVPTAPELRPSTSTDRPVTPKPTSRTTRSRTNMSSVKTPETV 1326
Query: 296 V 294
V
Sbjct: 1327 V 1327
>BX248307-2|CAM25929.1| 2089|Homo sapiens mediator of DNA damage
checkpoint 1 protein.
Length = 2089
Score = 32.7 bits (71), Expect = 1.2
Identities = 20/61 (32%), Positives = 28/61 (45%)
Frame = -3
Query: 476 EETNSRRTRGAHSARVYPVVPTHPATRRRALVTRPRLPKPTARHVPADIDDNEPKARNSV 297
+ T R+ R + PVVPT P R RP PKPT+R + + + K +V
Sbjct: 1267 QATRGRKNRSSVKTPE-PVVPTAPELRPSTSTDRPVTPKPTSRTTRSRTNMSSVKTPETV 1325
Query: 296 V 294
V
Sbjct: 1326 V 1326
>BC082974-1|AAH82974.1| 1151|Homo sapiens PLEKHG4 protein protein.
Length = 1151
Score = 32.7 bits (71), Expect = 1.2
Identities = 23/66 (34%), Positives = 34/66 (51%), Gaps = 2/66 (3%)
Frame = +2
Query: 389 LADGLPGVLAQRDRRGRCVLLVFASN--WSPQACSLISVFRALLLTIERTLRDIQNQANG 562
LA G+ + RD +GR VLL+ A + W CS + R LL R++ + QA G
Sbjct: 150 LASGMATLPGTRDVQGRAVLLLCAHSPAWLQSECSSQELIRLLLYL--RSIPRPEVQALG 207
Query: 563 YVIIVD 580
++VD
Sbjct: 208 LTVLVD 213
>BC063501-1|AAH63501.1| 1191|Homo sapiens PLEKHG4 protein protein.
Length = 1191
Score = 32.7 bits (71), Expect = 1.2
Identities = 23/66 (34%), Positives = 34/66 (51%), Gaps = 2/66 (3%)
Frame = +2
Query: 389 LADGLPGVLAQRDRRGRCVLLVFASN--WSPQACSLISVFRALLLTIERTLRDIQNQANG 562
LA G+ + RD +GR VLL+ A + W CS + R LL R++ + QA G
Sbjct: 190 LASGMATLPGTRDVQGRAVLLLCAHSPAWLQSECSSQELIRLLLYL--RSIPRPEVQALG 247
Query: 563 YVIIVD 580
++VD
Sbjct: 248 LTVLVD 253
>BA000025-70|BAB63322.1| 2090|Homo sapiens KIAA0170 protein.
Length = 2090
Score = 32.7 bits (71), Expect = 1.2
Identities = 20/61 (32%), Positives = 28/61 (45%)
Frame = -3
Query: 476 EETNSRRTRGAHSARVYPVVPTHPATRRRALVTRPRLPKPTARHVPADIDDNEPKARNSV 297
+ T R+ R + PVVPT P R RP PKPT+R + + + K +V
Sbjct: 1268 QATRGRKNRSSVKTPE-PVVPTAPELRPSTSTDRPVTPKPTSRTTRSRTNMSSVKTPETV 1326
Query: 296 V 294
V
Sbjct: 1327 V 1327
>AL845353-22|CAI41891.1| 2089|Homo sapiens mediator of DNA damage
checkpoint 1 protein.
Length = 2089
Score = 32.7 bits (71), Expect = 1.2
Identities = 20/61 (32%), Positives = 28/61 (45%)
Frame = -3
Query: 476 EETNSRRTRGAHSARVYPVVPTHPATRRRALVTRPRLPKPTARHVPADIDDNEPKARNSV 297
+ T R+ R + PVVPT P R RP PKPT+R + + + K +V
Sbjct: 1267 QATRGRKNRSSVKTPE-PVVPTAPELRPSTSTDRPVTPKPTSRTTRSRTNMSSVKTPETV 1325
Query: 296 V 294
V
Sbjct: 1326 V 1326
>AL845353-21|CAI41890.1| 1244|Homo sapiens mediator of DNA damage
checkpoint 1 protein.
Length = 1244
Score = 32.7 bits (71), Expect = 1.2
Identities = 20/61 (32%), Positives = 28/61 (45%)
Frame = -3
Query: 476 EETNSRRTRGAHSARVYPVVPTHPATRRRALVTRPRLPKPTARHVPADIDDNEPKARNSV 297
+ T R+ R + PVVPT P R RP PKPT+R + + + K +V
Sbjct: 657 QATRGRKNRSSVKTPE-PVVPTAPELRPSTSTDRPVTPKPTSRTTRSRTNMSSVKTPETV 715
Query: 296 V 294
V
Sbjct: 716 V 716
>AL662848-3|CAI17440.1| 2089|Homo sapiens mediator of DNA damage
checkpoint 1 protein.
Length = 2089
Score = 32.7 bits (71), Expect = 1.2
Identities = 20/61 (32%), Positives = 28/61 (45%)
Frame = -3
Query: 476 EETNSRRTRGAHSARVYPVVPTHPATRRRALVTRPRLPKPTARHVPADIDDNEPKARNSV 297
+ T R+ R + PVVPT P R RP PKPT+R + + + K +V
Sbjct: 1267 QATRGRKNRSSVKTPE-PVVPTAPELRPSTSTDRPVTPKPTSRTTRSRTNMSSVKTPETV 1325
Query: 296 V 294
V
Sbjct: 1326 V 1326
>AL662797-7|CAI18195.1| 2089|Homo sapiens mediator of DNA damage
checkpoint 1 protein.
Length = 2089
Score = 32.7 bits (71), Expect = 1.2
Identities = 20/61 (32%), Positives = 28/61 (45%)
Frame = -3
Query: 476 EETNSRRTRGAHSARVYPVVPTHPATRRRALVTRPRLPKPTARHVPADIDDNEPKARNSV 297
+ T R+ R + PVVPT P R RP PKPT+R + + + K +V
Sbjct: 1267 QATRGRKNRSSVKTPE-PVVPTAPELRPSTSTDRPVTPKPTSRTTRSRTNMSSVKTPETV 1325
Query: 296 V 294
V
Sbjct: 1326 V 1326
>AK024475-1|BAB15765.1| 1194|Homo sapiens FLJ00068 protein protein.
Length = 1194
Score = 32.7 bits (71), Expect = 1.2
Identities = 23/66 (34%), Positives = 34/66 (51%), Gaps = 2/66 (3%)
Frame = +2
Query: 389 LADGLPGVLAQRDRRGRCVLLVFASN--WSPQACSLISVFRALLLTIERTLRDIQNQANG 562
LA G+ + RD +GR VLL+ A + W CS + R LL R++ + QA G
Sbjct: 193 LASGMATLPGTRDVQGRAVLLLCAHSPAWLQSECSSQELIRLLLYL--RSIPRPEVQALG 250
Query: 563 YVIIVD 580
++VD
Sbjct: 251 LTVLVD 256
>AB197663-1|BAE07054.1| 1191|Homo sapiens puratrophin-1 protein.
Length = 1191
Score = 32.7 bits (71), Expect = 1.2
Identities = 23/66 (34%), Positives = 34/66 (51%), Gaps = 2/66 (3%)
Frame = +2
Query: 389 LADGLPGVLAQRDRRGRCVLLVFASN--WSPQACSLISVFRALLLTIERTLRDIQNQANG 562
LA G+ + RD +GR VLL+ A + W CS + R LL R++ + QA G
Sbjct: 190 LASGMATLPGTRDVQGRAVLLLCAHSPAWLQSECSSQELIRLLLYL--RSIPRPEVQALG 247
Query: 563 YVIIVD 580
++VD
Sbjct: 248 LTVLVD 253
>AB103605-1|BAF31266.1| 2089|Homo sapiens KIAA0170 protein protein.
Length = 2089
Score = 32.7 bits (71), Expect = 1.2
Identities = 20/61 (32%), Positives = 28/61 (45%)
Frame = -3
Query: 476 EETNSRRTRGAHSARVYPVVPTHPATRRRALVTRPRLPKPTARHVPADIDDNEPKARNSV 297
+ T R+ R + PVVPT P R RP PKPT+R + + + K +V
Sbjct: 1267 QATRGRKNRSSVKTPE-PVVPTAPELRPSTSTDRPVTPKPTSRTTRSRTNMSSVKTPETV 1325
Query: 296 V 294
V
Sbjct: 1326 V 1326
>AB088099-1|BAC54931.1| 2089|Homo sapiens homologue to Drosophila
photoreceptor protein calphotin protein.
Length = 2089
Score = 32.7 bits (71), Expect = 1.2
Identities = 20/61 (32%), Positives = 28/61 (45%)
Frame = -3
Query: 476 EETNSRRTRGAHSARVYPVVPTHPATRRRALVTRPRLPKPTARHVPADIDDNEPKARNSV 297
+ T R+ R + PVVPT P R RP PKPT+R + + + K +V
Sbjct: 1267 QATRGRKNRSSVKTPE-PVVPTAPELRPSTSTDRPVTPKPTSRTTRSRTNMSSVKTPETV 1325
Query: 296 V 294
V
Sbjct: 1326 V 1326
>BC051719-1|AAH51719.1| 304|Homo sapiens B3GALT6 protein protein.
Length = 304
Score = 30.3 bits (65), Expect = 6.6
Identities = 14/29 (48%), Positives = 20/29 (68%), Gaps = 1/29 (3%)
Frame = -2
Query: 429 LSRCANTPGNPSA-SARNTPPSAEAHSSS 346
L+RCA PG+P A S R+ PP A A +++
Sbjct: 4 LARCAAEPGDPRAMSGRSPPPPAPARAAA 32
>AY050570-1|AAL11442.1| 329|Homo sapiens
beta-1,3-galactosyltransferase-6 protein.
Length = 329
Score = 30.3 bits (65), Expect = 6.6
Identities = 14/29 (48%), Positives = 20/29 (68%), Gaps = 1/29 (3%)
Frame = -2
Query: 429 LSRCANTPGNPSA-SARNTPPSAEAHSSS 346
L+RCA PG+P A S R+ PP A A +++
Sbjct: 29 LARCAAEPGDPRAMSGRSPPPPAPARAAA 57
>AL162741-12|CAI23255.1| 329|Homo sapiens UDP-Gal:betaGal beta
1,3-galactosyltransferase polypeptide 6 protein.
Length = 329
Score = 30.3 bits (65), Expect = 6.6
Identities = 14/29 (48%), Positives = 20/29 (68%), Gaps = 1/29 (3%)
Frame = -2
Query: 429 LSRCANTPGNPSA-SARNTPPSAEAHSSS 346
L+RCA PG+P A S R+ PP A A +++
Sbjct: 29 LARCAAEPGDPRAMSGRSPPPPAPARAAA 57
>AF488691-1|AAN45858.1| 1004|Homo sapiens friend of GATA-1 protein.
Length = 1004
Score = 30.3 bits (65), Expect = 6.6
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = +1
Query: 172 TGAFGPKRGGGFEPQPRPTRQKPMS 246
T GPK G EP+PRPT ++P S
Sbjct: 60 TSPGGPKELEGQEPEPRPTEEEPGS 84
>AB202097-1|BAE78617.1| 2089|Homo sapiens mediator of DNA damage
checkpoint 1 protein.
Length = 2089
Score = 30.3 bits (65), Expect = 6.6
Identities = 23/64 (35%), Positives = 30/64 (46%), Gaps = 4/64 (6%)
Frame = -3
Query: 473 ETNSRRTRGA--HSARVYP--VVPTHPATRRRALVTRPRLPKPTARHVPADIDDNEPKAR 306
E S+ TRG S+ P VVPT P R RP PKPT+R + + + K
Sbjct: 1263 EPTSQATRGRKNRSSVKTPETVVPTAPELRPSTSTDRPVTPKPTSRTTRSRTNMSSVKTP 1322
Query: 305 NSVV 294
+VV
Sbjct: 1323 ETVV 1326
>U43586-1|AAC50354.1| 635|Homo sapiens KSR1 protein.
Length = 635
Score = 29.9 bits (64), Expect = 8.7
Identities = 14/48 (29%), Positives = 22/48 (45%)
Frame = -3
Query: 485 SMLEETNSRRTRGAHSARVYPVVPTHPATRRRALVTRPRLPKPTARHV 342
++ + T + AH+ + PT P RR + PR P P +R V
Sbjct: 7 ALTQHTAHTQHTSAHTQHSFITPPTTPQLRRHTKLKPPRTPPPPSRKV 54
>AY335946-1|AAQ16552.1| 445|Homo sapiens homeodomain protein IRXB3
protein.
Length = 445
Score = 29.9 bits (64), Expect = 8.7
Identities = 15/34 (44%), Positives = 17/34 (50%), Gaps = 2/34 (5%)
Frame = -2
Query: 438 RPRLSRCANTPGNPSASAR--NTPPSAEAHSSSC 343
RPR C PG P ASAR + P + SSC
Sbjct: 372 RPRSPECRMIPGQPPASARRLSVPRDSACDESSC 405
>AY335937-1|AAQ16543.1| 445|Homo sapiens homeodomain protein IRXB3
protein.
Length = 445
Score = 29.9 bits (64), Expect = 8.7
Identities = 15/34 (44%), Positives = 17/34 (50%), Gaps = 2/34 (5%)
Frame = -2
Query: 438 RPRLSRCANTPGNPSASAR--NTPPSAEAHSSSC 343
RPR C PG P ASAR + P + SSC
Sbjct: 372 RPRSPECRMIPGQPPASARRLSVPRDSACDESSC 405
>AK125053-1|BAC86033.1| 446|Homo sapiens protein ( Homo sapiens
cDNA FLJ43063 fis, clone BRTHA3008310, moderately
similar to Mus musculus mRNA for iroquois homeobox
protein 6. ).
Length = 446
Score = 29.9 bits (64), Expect = 8.7
Identities = 15/34 (44%), Positives = 17/34 (50%), Gaps = 2/34 (5%)
Frame = -2
Query: 438 RPRLSRCANTPGNPSASAR--NTPPSAEAHSSSC 343
RPR C PG P ASAR + P + SSC
Sbjct: 372 RPRSPECRMIPGQPPASARRLSVPRDSACDESSC 405
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 97,105,066
Number of Sequences: 237096
Number of extensions: 2156187
Number of successful extensions: 10491
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 9921
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10466
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7647512560
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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