Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-5899
         (673 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X72575-1|CAA51167.1|  168|Apis mellifera Apidaecin precursor pro...    23   2.6  
DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    23   3.5  
AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.       21   8.1  
AY855337-1|AAW47987.1|  510|Apis mellifera tyrosine hydroxylase ...    21   8.1  
AY569781-1|AAS75781.1|  461|Apis mellifera neuronal nicotinic ac...    21   8.1  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             21   8.1  

>X72575-1|CAA51167.1|  168|Apis mellifera Apidaecin precursor
           protein.
          Length = 168

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 11/32 (34%), Positives = 15/32 (46%), Gaps = 1/32 (3%)
 Frame = -3

Query: 407 PATRRRALVTRPRLPKPTARHVP-ADIDDNEP 315
           P   R   + +PR P P  R  P A+  +N P
Sbjct: 98  PGNNRPVYIPQPRPPHPRLRREPEAEPGNNRP 129



 Score = 23.0 bits (47), Expect = 2.6
 Identities = 11/32 (34%), Positives = 15/32 (46%), Gaps = 1/32 (3%)
 Frame = -3

Query: 407 PATRRRALVTRPRLPKPTARHVP-ADIDDNEP 315
           P   R   + +PR P P  R  P A+  +N P
Sbjct: 124 PGNNRPVYIPQPRPPHPRLRREPEAEPGNNRP 155


>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 10/43 (23%), Positives = 22/43 (51%)
 Frame = -1

Query: 379 HAPVCRSPQLVMFPPILMITNQKLETLLYVVFTRV*KSPQKIV 251
           +  +C+   L  FP I + + Q +ET++        + PQ+++
Sbjct: 90  YGALCKEEALWNFPMISVFSRQDIETIIRRNSRYPLRPPQEVI 132


>AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.
          Length = 349

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 7/20 (35%), Positives = 14/20 (70%)
 Frame = -1

Query: 94  VFGVLVHYWFS*V*VMRPFT 35
           +FG+++ YWF  V ++  +T
Sbjct: 206 LFGMIMMYWFPLVVIIYTYT 225


>AY855337-1|AAW47987.1|  510|Apis mellifera tyrosine hydroxylase
           protein.
          Length = 510

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 6/16 (37%), Positives = 10/16 (62%)
 Frame = +3

Query: 195 RRWIRASTSPYETKAD 242
           RRW+   + P+E + D
Sbjct: 454 RRWVSTMSRPFEVRYD 469


>AY569781-1|AAS75781.1|  461|Apis mellifera neuronal nicotinic
           acetylcholine Apisa7-2 subunit protein.
          Length = 461

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 10/28 (35%), Positives = 15/28 (53%)
 Frame = +1

Query: 484 LINFSL*SSASYH*THTEGYPEPSQRIR 567
           L+NFS   +  Y+    E YP+ +  IR
Sbjct: 181 LVNFSARRNVEYYSCCPEPYPDITYEIR 208


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = +1

Query: 544  PEPSQRIRNYSGLDRV 591
            P PS R RN  G DR+
Sbjct: 1379 PSPSDRGRNDDGSDRL 1394


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 190,149
Number of Sequences: 438
Number of extensions: 4235
Number of successful extensions: 10
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20343105
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)