Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-5898
         (700 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT015259-1|AAT94488.1| 1201|Drosophila melanogaster LD42253p pro...    38   0.017
BT001504-1|AAN71259.1|  712|Drosophila melanogaster LD35834p pro...    38   0.017
AF019250-1|AAB66813.1| 1201|Drosophila melanogaster kinesin-rela...    38   0.017
AE013599-387|AAF59270.1| 1201|Drosophila melanogaster CG1708-PA ...    38   0.017
AY075309-1|AAL68176.1|  420|Drosophila melanogaster AT31826p pro...    31   1.5  
AE014297-4599|AAF57051.1|  420|Drosophila melanogaster CG2224-PA...    31   1.5  
DQ431010-1|ABD85475.1|  470|Drosophila melanogaster male germlin...    29   8.0  

>BT015259-1|AAT94488.1| 1201|Drosophila melanogaster LD42253p
           protein.
          Length = 1201

 Score = 37.5 bits (83), Expect = 0.017
 Identities = 21/77 (27%), Positives = 39/77 (50%)
 Frame = +3

Query: 435 ILQTTLPTSARTRTAMEKVSPFRKSMAQREGKEQKIGTLTGIAQEQQPVL*E*IKNEKRK 614
           I Q  L  +A T    +     RK +A+ EGK++++  +    Q +Q ++ E +KN   +
Sbjct: 643 IRQAALAAAAATAPIEQLQKKLRKLVAEIEGKQRQLREIEETIQVKQNIIAELVKNSDTR 702

Query: 615 AHRKKNQYYVRNGIELE 665
           +H K+  +  R  +E E
Sbjct: 703 SHAKQRFHKKRAKLEAE 719


>BT001504-1|AAN71259.1|  712|Drosophila melanogaster LD35834p
           protein.
          Length = 712

 Score = 37.5 bits (83), Expect = 0.017
 Identities = 21/77 (27%), Positives = 39/77 (50%)
 Frame = +3

Query: 435 ILQTTLPTSARTRTAMEKVSPFRKSMAQREGKEQKIGTLTGIAQEQQPVL*E*IKNEKRK 614
           I Q  L  +A T    +     RK +A+ EGK++++  +    Q +Q ++ E +KN   +
Sbjct: 154 IRQAALAAAAATAPIEQLQKKLRKLVAEIEGKQRQLREIEETIQVKQNIIAELVKNSDTR 213

Query: 615 AHRKKNQYYVRNGIELE 665
           +H K+  +  R  +E E
Sbjct: 214 SHAKQRFHKKRAKLEAE 230


>AF019250-1|AAB66813.1| 1201|Drosophila melanogaster kinesin-related
           protein protein.
          Length = 1201

 Score = 37.5 bits (83), Expect = 0.017
 Identities = 21/77 (27%), Positives = 39/77 (50%)
 Frame = +3

Query: 435 ILQTTLPTSARTRTAMEKVSPFRKSMAQREGKEQKIGTLTGIAQEQQPVL*E*IKNEKRK 614
           I Q  L  +A T    +     RK +A+ EGK++++  +    Q +Q ++ E +KN   +
Sbjct: 643 IRQAALAAAAATAPIEQLQKKLRKLVAEIEGKQRQLREIEETIQVKQNIIAELVKNSDTR 702

Query: 615 AHRKKNQYYVRNGIELE 665
           +H K+  +  R  +E E
Sbjct: 703 SHAKQRFHKKRAKLEAE 719


>AE013599-387|AAF59270.1| 1201|Drosophila melanogaster CG1708-PA
           protein.
          Length = 1201

 Score = 37.5 bits (83), Expect = 0.017
 Identities = 21/77 (27%), Positives = 39/77 (50%)
 Frame = +3

Query: 435 ILQTTLPTSARTRTAMEKVSPFRKSMAQREGKEQKIGTLTGIAQEQQPVL*E*IKNEKRK 614
           I Q  L  +A T    +     RK +A+ EGK++++  +    Q +Q ++ E +KN   +
Sbjct: 643 IRQAALAAAAATAPIEQLQKKLRKLVAEIEGKQRQLREIEETIQVKQNIIAELVKNSDTR 702

Query: 615 AHRKKNQYYVRNGIELE 665
           +H K+  +  R  +E E
Sbjct: 703 SHAKQRFHKKRAKLEAE 719


>AY075309-1|AAL68176.1|  420|Drosophila melanogaster AT31826p
           protein.
          Length = 420

 Score = 31.1 bits (67), Expect = 1.5
 Identities = 23/59 (38%), Positives = 30/59 (50%)
 Frame = -2

Query: 531 LSPLVGPYFFETGSPSPLRYESGLMLAASSEEFEDKSDDRSSIFTVSWLPSSR*KDSLL 355
           L  +V P  F TG+   L   SGL+L A+SE   DK+ +    F  +  PS    DSLL
Sbjct: 186 LDQVVYPNDFPTGANRSLP-GSGLLLPAASEAATDKTTNSKPSFDRNQKPSYNRTDSLL 243


>AE014297-4599|AAF57051.1|  420|Drosophila melanogaster CG2224-PA
           protein.
          Length = 420

 Score = 31.1 bits (67), Expect = 1.5
 Identities = 23/59 (38%), Positives = 30/59 (50%)
 Frame = -2

Query: 531 LSPLVGPYFFETGSPSPLRYESGLMLAASSEEFEDKSDDRSSIFTVSWLPSSR*KDSLL 355
           L  +V P  F TG+   L   SGL+L A+SE   DK+ +    F  +  PS    DSLL
Sbjct: 186 LDQVVYPNDFPTGANRSLP-GSGLLLPAASEAAADKTTNSKPSFDRNQKPSYNRTDSLL 243


>DQ431010-1|ABD85475.1|  470|Drosophila melanogaster male germline
           specific protein protein.
          Length = 470

 Score = 28.7 bits (61), Expect = 8.0
 Identities = 20/65 (30%), Positives = 34/65 (52%)
 Frame = +1

Query: 493 ARFEKVWPNERGKSRRSAL*QG*PRSSSLSFESK*KTKNAKHIGRRTNIMSETVSN*KSR 672
           A+ + V+ + R +  R ++     +S  LS E K + K+   IGR++  +SE  S  KSR
Sbjct: 407 AQEQGVFASTRTRLSRKSVRNSESKSERLS-EKKSERKSENKIGRKSERLSERRSERKSR 465

Query: 673 TCRXP 687
             + P
Sbjct: 466 NSKMP 470


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,957,414
Number of Sequences: 53049
Number of extensions: 661153
Number of successful extensions: 1640
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1566
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1640
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3067209849
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)