Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-5893
(392 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC23G7.08c |rga7||GTPase activating protein Rga7|Schizosacchar... 29 0.19
SPAC1F12.09 |gpi17||pig-S|Schizosaccharomyces pombe|chr 1|||Manual 28 0.45
SPAC57A10.02 |cdr2||GIN4 family protein kinase Cdr2|Schizosaccha... 27 1.4
SPAC19E9.01c |nup40||nucleoporin Nup40|Schizosaccharomyces pombe... 26 2.4
SPAC22G7.06c |ura1||carbamoyl-phosphate synthase |Schizosaccharo... 25 3.2
SPBC1105.10 |rav1||RAVE complex subunit Rav1 |Schizosaccharomyce... 25 4.2
SPCC1682.15 |mug122||PX/PXA domain protein|Schizosaccharomyces p... 25 4.2
SPBC18H10.16 |||amino acid permease, unknown 9|Schizosaccharomyc... 25 4.2
SPBC25H2.13c |cdc20|pol2|DNA polymerase epsilon catalytic subuni... 25 5.5
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 25 5.5
SPBC354.07c |||oxysterol binding protein |Schizosaccharomyces po... 25 5.5
SPBC1604.01 |mug158|SPBC1677.01c|sulfatase modifying factor 1 re... 24 7.3
SPCC1919.10c |myo52||myosin type V|Schizosaccharomyces pombe|chr... 24 7.3
SPAC31G5.02 |||conserved fungal protein|Schizosaccharomyces pomb... 24 7.3
SPBC4B4.05 |smg1||Sm snRNP core protein Smg1|Schizosaccharomyces... 24 7.3
SPAP11E10.02c |mam3|SPAPB1A10.01c|cell agglutination protein Mam... 24 9.7
SPAC1F3.02c |mkh1||MEK kinase |Schizosaccharomyces pombe|chr 1||... 24 9.7
SPBC23G7.13c |||urea transporter |Schizosaccharomyces pombe|chr ... 24 9.7
SPBC106.08c |mug2||DUF1773 family protein 1|Schizosaccharomyces ... 24 9.7
SPAC227.03c |||mitochondrial NAD+ transporter|Schizosaccharomyce... 24 9.7
SPAC25B8.12c |||nucleotide-sugar phosphatase |Schizosaccharomyce... 24 9.7
SPAC29A4.16 |hal4|sat4, ppk10|halotolerence protein 4|Schizosacc... 24 9.7
SPCC1281.01 |ags1|mok1, SPCC338.01c, SPCC17A7.01|alpha-1,4-gluca... 24 9.7
>SPBC23G7.08c |rga7||GTPase activating protein
Rga7|Schizosaccharomyces pombe|chr 2|||Manual
Length = 695
Score = 29.5 bits (63), Expect = 0.19
Identities = 16/38 (42%), Positives = 21/38 (55%)
Frame = +2
Query: 122 TLPGKYSTA*RTRRPHSDPPSLTVSNRVSRTWTPASVS 235
TLP +T +T R + PPS SNR + + P SVS
Sbjct: 455 TLPPIQTTTIQTSREVAPPPSSINSNRAASPFRPTSVS 492
>SPAC1F12.09 |gpi17||pig-S|Schizosaccharomyces pombe|chr 1|||Manual
Length = 554
Score = 28.3 bits (60), Expect = 0.45
Identities = 13/46 (28%), Positives = 21/46 (45%)
Frame = +1
Query: 154 NKKTSFGSTLLDCIQSGVENLDSGVGIYAPDAESYSVFAELFDPII 291
N+ S+ + Q + + IY PD Y ++A LF PI+
Sbjct: 479 NEALSYSNNAFSKSQEALFHPSMVTTIYFPDESKYGIYAPLFAPIL 524
>SPAC57A10.02 |cdr2||GIN4 family protein kinase
Cdr2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 775
Score = 26.6 bits (56), Expect = 1.4
Identities = 16/39 (41%), Positives = 22/39 (56%), Gaps = 2/39 (5%)
Frame = -3
Query: 144 VEYFPGKVLLQQRLRVGSLELAETSLQFLEG--CGVDHC 34
VEY PG L LR GS +T+ +FL CG+++C
Sbjct: 87 VEYMPGGELFDCMLRKGSFTEQDTA-KFLWQILCGLEYC 124
>SPAC19E9.01c |nup40||nucleoporin Nup40|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 371
Score = 25.8 bits (54), Expect = 2.4
Identities = 8/20 (40%), Positives = 14/20 (70%)
Frame = +1
Query: 286 IIEDYHNGFKKTDKHPPKNW 345
I++ ++ FK + KH P+NW
Sbjct: 304 IVQHKNDIFKSSQKHQPRNW 323
>SPAC22G7.06c |ura1||carbamoyl-phosphate synthase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2244
Score = 25.4 bits (53), Expect = 3.2
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = -3
Query: 264 HGVRLGVRRVDTDAGVQVLDTRLDTV 187
+ L VRR+ T+AG++ ++DTV
Sbjct: 962 NSTELAVRRIRTEAGIRPFVKQIDTV 987
>SPBC1105.10 |rav1||RAVE complex subunit Rav1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1297
Score = 25.0 bits (52), Expect = 4.2
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = -3
Query: 387 LTDGVEVAERVHVSPVLGRVLVG 319
+TD E+ H SP LG+ L+G
Sbjct: 1254 VTDKQSAVEKTHDSPKLGKTLMG 1276
>SPCC1682.15 |mug122||PX/PXA domain protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 749
Score = 25.0 bits (52), Expect = 4.2
Identities = 10/33 (30%), Positives = 17/33 (51%)
Frame = +1
Query: 283 PIIEDYHNGFKKTDKHPPKNWGDVDTLGNLDPV 381
P+++D +NGF KH + + L N+ V
Sbjct: 423 PLVDDIYNGFDVDKKHQSSSVPTLPNLTNISRV 455
>SPBC18H10.16 |||amino acid permease, unknown 9|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1050
Score = 25.0 bits (52), Expect = 4.2
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +1
Query: 331 PPKNWGDV 354
PPKNWGDV
Sbjct: 521 PPKNWGDV 528
>SPBC25H2.13c |cdc20|pol2|DNA polymerase epsilon catalytic subunit a
Pol2 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 2199
Score = 24.6 bits (51), Expect = 5.5
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = -1
Query: 233 IPTPESKFSTPDWIQSR 183
I P ++F PDW+Q R
Sbjct: 1152 ISNPVTRFPLPDWLQKR 1168
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 24.6 bits (51), Expect = 5.5
Identities = 17/51 (33%), Positives = 24/51 (47%)
Frame = +2
Query: 116 RSTLPGKYSTA*RTRRPHSDPPSLTVSNRVSRTWTPASVSTRRTPSRTPCS 268
R + G+ ++ R P S PP L VSN +S +P S + P P S
Sbjct: 950 RPSNDGRKASGPRPAAPPSIPPPLPVSNILS---SPTSEPPKDHPPSAPLS 997
>SPBC354.07c |||oxysterol binding protein |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 399
Score = 24.6 bits (51), Expect = 5.5
Identities = 12/51 (23%), Positives = 25/51 (49%)
Frame = -3
Query: 363 ERVHVSPVLGRVLVGLLEAIVVVLDDRVKQLGEHGVRLGVRRVDTDAGVQV 211
E+ ++P+LG + G ++ ++ +Q+ HG V +AG+ V
Sbjct: 107 EKKPLNPILGELFYGSWDSSKGKVELTAEQVSHHGPESAAHVVCKEAGITV 157
>SPBC1604.01 |mug158|SPBC1677.01c|sulfatase modifying factor 1
related|Schizosaccharomyces pombe|chr 2|||Manual
Length = 773
Score = 24.2 bits (50), Expect = 7.3
Identities = 25/80 (31%), Positives = 34/80 (42%), Gaps = 10/80 (12%)
Frame = +1
Query: 148 LKNKKTSFGSTLLDCIQSGVENLDSGVGIYAPDAES------YSVFAELFDPIIE----D 297
L + TS GS L S EN D + +A D E S F+ PI D
Sbjct: 532 LTTQYTSVGSNLQSSDLSAHENTDE-LFYFAWDNEKPMRKKLVSSFSIANRPISNGEYLD 590
Query: 298 YHNGFKKTDKHPPKNWGDVD 357
+ N KT++ PK W ++D
Sbjct: 591 FINKKSKTERVYPKQWAEID 610
>SPCC1919.10c |myo52||myosin type V|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1516
Score = 24.2 bits (50), Expect = 7.3
Identities = 18/67 (26%), Positives = 29/67 (43%), Gaps = 1/67 (1%)
Frame = -1
Query: 221 ESKFSTPD-WIQSRRVDPNEVFLFFRLSNTSLVRYFFSSDLESDPWSLLKPASNFSRVAA 45
E K S D +I S+ + + +SLV++ ++ +LKP + F V A
Sbjct: 355 EVKHSRNDAYIDSKNENLINATSLLGVDPSSLVKWLTKRKIKMASEGILKPLNEFQAVVA 414
Query: 44 STIVAAF 24
VA F
Sbjct: 415 RDSVAKF 421
>SPAC31G5.02 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 232
Score = 24.2 bits (50), Expect = 7.3
Identities = 11/41 (26%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Frame = +1
Query: 181 LLDCIQSGVENLDSG-VGIYAPDAESYSVFAELFDPIIEDY 300
L + + ++N D VG ++ +E+ + FDP+ ED+
Sbjct: 15 LTQYVGAEIDNYDENLVGTWSSKSETVLTGPDFFDPLDEDF 55
>SPBC4B4.05 |smg1||Sm snRNP core protein Smg1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 77
Score = 24.2 bits (50), Expect = 7.3
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +1
Query: 112 LKKYLTREVFDSLKNKKTSFG 174
LKKYL R+VF L + +G
Sbjct: 9 LKKYLDRQVFVQLNGSRKVYG 29
>SPAP11E10.02c |mam3|SPAPB1A10.01c|cell agglutination protein
Mam3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1082
Score = 23.8 bits (49), Expect = 9.7
Identities = 15/46 (32%), Positives = 21/46 (45%)
Frame = -1
Query: 140 NTSLVRYFFSSDLESDPWSLLKPASNFSRVAASTIVAAFAGT*TTV 3
+TS FS+D+ + P +L PAS+ S T TTV
Sbjct: 249 STSEATVSFSTDIPATPSTLSSPASSSSSYLVETSSTLTDSVFTTV 294
>SPAC1F3.02c |mkh1||MEK kinase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1116
Score = 23.8 bits (49), Expect = 9.7
Identities = 10/25 (40%), Positives = 17/25 (68%)
Frame = +1
Query: 97 DSKSLLKKYLTREVFDSLKNKKTSF 171
DS+++ KK L+++ K K+TSF
Sbjct: 206 DSRNINKKTLSKQPVSEHKEKQTSF 230
>SPBC23G7.13c |||urea transporter |Schizosaccharomyces pombe|chr
2|||Manual
Length = 664
Score = 23.8 bits (49), Expect = 9.7
Identities = 19/48 (39%), Positives = 23/48 (47%)
Frame = -1
Query: 167 EVFLFFRLSNTSLVRYFFSSDLESDPWSLLKPASNFSRVAASTIVAAF 24
E + F RL T +F S + E L AS S+VAA I AAF
Sbjct: 518 EKYDFNRLLAT-FAMHFSSEEDEIQQTKKLNRASVISKVAALIITAAF 564
>SPBC106.08c |mug2||DUF1773 family protein 1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 296
Score = 23.8 bits (49), Expect = 9.7
Identities = 11/31 (35%), Positives = 14/31 (45%)
Frame = +1
Query: 253 SYSVFAELFDPIIEDYHNGFKKTDKHPPKNW 345
SY+ A + DYH TD PKN+
Sbjct: 57 SYAGLARHESHVDTDYHGQALNTDNQDPKNY 87
>SPAC227.03c |||mitochondrial NAD+ transporter|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 371
Score = 23.8 bits (49), Expect = 9.7
Identities = 13/44 (29%), Positives = 22/44 (50%)
Frame = +2
Query: 140 STA*RTRRPHSDPPSLTVSNRVSRTWTPASVSTRRTPSRTPCSP 271
+T + R +D PS V R+ R W + + +PS+ P +P
Sbjct: 179 ATTVQFRNLQTDAPS--VKWRMPRFWLKRRTNVKSSPSQHPVNP 220
>SPAC25B8.12c |||nucleotide-sugar phosphatase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 303
Score = 23.8 bits (49), Expect = 9.7
Identities = 12/43 (27%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
Frame = +1
Query: 49 ATLEKLEAGFSKLQGSDSKSLLKKYLTREVFDSLKNKKT-SFG 174
AT + LE + + +K +Y+T + +KN+ SFG
Sbjct: 198 ATTQALEFCIELIPSNSNKGTALQYITSNILPEVKNENVISFG 240
>SPAC29A4.16 |hal4|sat4, ppk10|halotolerence protein
4|Schizosaccharomyces pombe|chr 1|||Manual
Length = 636
Score = 23.8 bits (49), Expect = 9.7
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = +2
Query: 221 PASVSTRRTPSRTP 262
PA VST TPSR P
Sbjct: 193 PAPVSTTATPSRNP 206
>SPCC1281.01 |ags1|mok1, SPCC338.01c, SPCC17A7.01|alpha-1,4-glucan
synthase Ags1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 2410
Score = 23.8 bits (49), Expect = 9.7
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = -1
Query: 329 CLSVFLKPLW*SSMIGSNSS 270
C+SVFL+ W SS+ G + S
Sbjct: 2202 CISVFLQNFWLSSLNGRSWS 2221
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.313 0.133 0.382
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,618,366
Number of Sequences: 5004
Number of extensions: 31973
Number of successful extensions: 103
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 102
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 103
length of database: 2,362,478
effective HSP length: 66
effective length of database: 2,032,214
effective search space used: 130061696
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
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