Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-5893
         (392 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.   210   3e-57
EF032397-1|ABM97933.1|  200|Apis mellifera arginine kinase protein.   187   5e-50
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    25   0.24 
AJ555537-1|CAD88245.1|  210|Apis mellifera putative chemosensory...    24   0.54 
AF514804-1|AAM51823.1|  537|Apis mellifera neuronal nicotinic ac...    22   2.2  
AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.          21   3.8  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    21   3.8  
DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chlor...    21   5.1  
DQ667185-1|ABG75737.1|  447|Apis mellifera glutamate-gated chlor...    21   5.1  
DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor pr...    21   6.7  
AF023666-1|AAC14552.1|  363|Apis mellifera sn-glycerol-3-phospha...    20   8.8  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             20   8.8  

>AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.
          Length = 355

 Score =  210 bits (514), Expect = 3e-57
 Identities = 95/118 (80%), Positives = 107/118 (90%)
 Frame = +1

Query: 37  MVDAATLEKLEAGFSKLQGSDSKSLLKKYLTREVFDSLKNKKTSFGSTLLDCIQSGVENL 216
           MVD A L+KLE GFSKL  SDSKSLLKKYL+++VFD LK KKTSF STLLDCIQSG+ENL
Sbjct: 1   MVDQAVLDKLETGFSKLSSSDSKSLLKKYLSKDVFDQLKTKKTSFDSTLLDCIQSGIENL 60

Query: 217 DSGVGIYAPDAESYSVFAELFDPIIEDYHNGFKKTDKHPPKNWGDVDTLGNLDPVGEF 390
           DSGVGIYAPDAE+Y++FA+LFDPIIEDYH GFKKTDKHPPK++GDVD+LGNLDP  EF
Sbjct: 61  DSGVGIYAPDAEAYTLFADLFDPIIEDYHGGFKKTDKHPPKDFGDVDSLGNLDPANEF 118


>EF032397-1|ABM97933.1|  200|Apis mellifera arginine kinase protein.
          Length = 200

 Score =  187 bits (455), Expect = 5e-50
 Identities = 83/102 (81%), Positives = 94/102 (92%)
 Frame = +1

Query: 85  LQGSDSKSLLKKYLTREVFDSLKNKKTSFGSTLLDCIQSGVENLDSGVGIYAPDAESYSV 264
           L  SDSKSLLKKYL+++VFD LK KKTSF STLLDCIQSG+ENLDSGVGIYAPDAE+Y++
Sbjct: 1   LSSSDSKSLLKKYLSKDVFDQLKTKKTSFDSTLLDCIQSGIENLDSGVGIYAPDAEAYTL 60

Query: 265 FAELFDPIIEDYHNGFKKTDKHPPKNWGDVDTLGNLDPVGEF 390
           FA+LFDPIIEDYH GFKKTDKHPPK++GDVD+LGNLDP  EF
Sbjct: 61  FADLFDPIIEDYHGGFKKTDKHPPKDFGDVDSLGNLDPANEF 102


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 25.4 bits (53), Expect = 0.24
 Identities = 20/64 (31%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
 Frame = -3

Query: 372 EVAERVHVSPVLGRVLVGLLEAIVVVLDDRVKQLGEHGVRLGVRRV-DTDAGVQVLDTRL 196
           E  +R+   PV+ +  V  LEA++  LD    Q    GVR+G   + D D     L+  +
Sbjct: 127 ERQDRLTCGPVMPQGGVQALEAMLYTLDKLNTQDIVPGVRIGAHILDDCDNDTYGLEMSV 186

Query: 195 DTVK 184
           D +K
Sbjct: 187 DFIK 190



 Score = 20.6 bits (41), Expect = 6.7
 Identities = 10/28 (35%), Positives = 16/28 (57%)
 Frame = +2

Query: 185 LTVSNRVSRTWTPASVSTRRTPSRTPCS 268
           LT +NR+SR +  +  S +R    +P S
Sbjct: 740 LTKTNRISRIFNASKHSAKRPSFISPRS 767


>AJ555537-1|CAD88245.1|  210|Apis mellifera putative chemosensory
           receptor 2 protein.
          Length = 210

 Score = 24.2 bits (50), Expect = 0.54
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = +3

Query: 132 GSIRQPEEQEDLIRIHPP 185
           GS  QP+EQE L  + PP
Sbjct: 33  GSAEQPKEQEPLPPVTPP 50


>AF514804-1|AAM51823.1|  537|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha-3 protein.
          Length = 537

 Score = 22.2 bits (45), Expect = 2.2
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = +2

Query: 200 RVSRTWTPASVSTRRTPSRTP 262
           +V   W P  +  RRTP  TP
Sbjct: 352 QVFLNWMPRLLMMRRTPYSTP 372


>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score = 21.4 bits (43), Expect = 3.8
 Identities = 8/19 (42%), Positives = 9/19 (47%)
 Frame = +3

Query: 288 HRGLPQWLQEDRQAPAQEL 344
           H G   W QED  A  + L
Sbjct: 405 HHGSKSWTQEDMDAALEAL 423


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 21.4 bits (43), Expect = 3.8
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = +2

Query: 221 PASVSTRRTPSRTPCSPS 274
           P  V  R TP+ T C P+
Sbjct: 199 PILVRARETPNYTACPPT 216


>DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chloride
           channel protein.
          Length = 447

 Score = 21.0 bits (42), Expect = 5.1
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = -1

Query: 161 FLFFRLSNTSLVRYFFSSDLESD 93
           F+F  L   +LV Y   SD+ SD
Sbjct: 314 FVFGALLEFALVNYASRSDMHSD 336


>DQ667185-1|ABG75737.1|  447|Apis mellifera glutamate-gated chloride
           channel protein.
          Length = 447

 Score = 21.0 bits (42), Expect = 5.1
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = -1

Query: 161 FLFFRLSNTSLVRYFFSSDLESD 93
           F+F  L   +LV Y   SD+ SD
Sbjct: 314 FVFGALLEFALVNYASRSDMHSD 336


>DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor
           protein.
          Length = 459

 Score = 20.6 bits (41), Expect = 6.7
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = +1

Query: 274 LFDPIIEDYHNGFKKTDKHPPKN 342
           L++ +   Y N FK+T +  P N
Sbjct: 315 LYNVMSAKYRNAFKETCRCSPSN 337


>AF023666-1|AAC14552.1|  363|Apis mellifera sn-glycerol-3-phosphate
           dehydrogenase protein.
          Length = 363

 Score = 20.2 bits (40), Expect = 8.8
 Identities = 8/21 (38%), Positives = 10/21 (47%)
 Frame = -3

Query: 63  FLEGCGVDHCCGFCWHLNNRQ 1
           F E CGV      C+   NR+
Sbjct: 253 FFESCGVADLIATCYGGRNRK 273


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 20.2 bits (40), Expect = 8.8
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = +3

Query: 297 LPQWLQEDRQAP 332
           LPQW    R+AP
Sbjct: 484 LPQWCLPPREAP 495


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.313    0.133    0.382 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 105,571
Number of Sequences: 438
Number of extensions: 2237
Number of successful extensions: 13
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used:  9638226
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.0 bits)