Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-5892
(773 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY155490-1|AAO12861.1| 342|Apis mellifera Ammar1 transposase pr... 256 1e-70
L10433-1|AAA27732.1| 149|Apis mellifera transposase protein. 177 7e-47
L10430-1|AAA27731.1| 150|Apis mellifera transposase protein. 173 2e-45
EF493864-1|ABP65286.1| 247|Apis mellifera triosephoshpate isome... 27 0.15
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 24 1.8
AY588474-1|AAT94401.1| 104|Apis mellifera defensin 2 protein. 23 3.2
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 23 3.2
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 23 3.2
DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated... 23 4.2
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 23 4.2
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 23 4.2
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 23 4.2
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 23 4.2
>AY155490-1|AAO12861.1| 342|Apis mellifera Ammar1 transposase
protein.
Length = 342
Score = 256 bits (628), Expect = 1e-70
Identities = 118/204 (57%), Positives = 147/204 (72%), Gaps = 3/204 (1%)
Frame = +2
Query: 8 DSLVRRNETEPFLKKQITGDENWITYDKNVRKRSLSKAGQASQTVAKSELTRNKVMLCVW 187
D L +RNE +PFLK+ ITGDE W+ Y+ RKRS S+ + +QT +K+ + R KV+L VW
Sbjct: 134 DLLKKRNENDPFLKRLITGDEKWVVYNNIKRKRSWSRPREPAQTTSKAGIHRKKVLLSVW 193
Query: 188 WDWKGIIHYELLPPGRAIDSELYCEQLMRLKQGVERKRPELINRRGVVFHHDNARPHTSL 367
WD+KGI+++ELLPP R I+S +Y EQL +L VE KRPEL NR+GVVFHHDNARPHTSL
Sbjct: 194 WDYKGIVYFELLPPNRTINSVVYIEQLTKLNNAVEEKRPELTNRKGVVFHHDNARPHTSL 253
Query: 368 ATKQKSRELGWEVLMHPPYSADLAPSDFHLFRSLQNSLGSVRLTSREDCQNQLSRYFDQK 547
T+QK ELGW+VL HPPYS DLAPSD+ LFRSLQNSL + +D ++ L ++F K
Sbjct: 254 VTRQKLLELGWDVLPHPPYSPDLAPSDYFLFRSLQNSLNGKNFNNDDDIKSYLIQFFANK 313
Query: 548 PQNFYS---MSLPTRWPKVSKQNG 610
Q FY M LP RW KV QNG
Sbjct: 314 NQKFYERGIMMLPERWQKVIDQNG 337
>L10433-1|AAA27732.1| 149|Apis mellifera transposase protein.
Length = 149
Score = 177 bits (432), Expect = 7e-47
Identities = 80/138 (57%), Positives = 102/138 (73%)
Frame = +2
Query: 8 DSLVRRNETEPFLKKQITGDENWITYDKNVRKRSLSKAGQASQTVAKSELTRNKVMLCVW 187
D L +RNE +PFLK+ ITGDE W+ + RKR S+ + +QT +K+ + R KV+L VW
Sbjct: 13 DLLKKRNENDPFLKRPITGDEKWVVNNIK-RKRWWSRPREPAQTTSKAGIHRKKVLLSVW 71
Query: 188 WDWKGIIHYELLPPGRAIDSELYCEQLMRLKQGVERKRPELINRRGVVFHHDNARPHTSL 367
WD+KGI+++ELL P R I+S +Y EQL +L VE KRPEL NR+ VVFHHDNARPHTSL
Sbjct: 72 WDYKGIVYFELLSPNRTINSVVYIEQLTKLNNAVEEKRPELTNRKSVVFHHDNARPHTSL 131
Query: 368 ATKQKSRELGWEVLMHPP 421
T+QK ELGW+VL HPP
Sbjct: 132 VTRQKLLELGWDVLPHPP 149
>L10430-1|AAA27731.1| 150|Apis mellifera transposase protein.
Length = 150
Score = 173 bits (421), Expect = 2e-45
Identities = 76/136 (55%), Positives = 101/136 (74%)
Frame = +2
Query: 8 DSLVRRNETEPFLKKQITGDENWITYDKNVRKRSLSKAGQASQTVAKSELTRNKVMLCVW 187
D L +R+E +PFLK+ ITGDE W+ Y+ RKRS S+ +++QT +K+ + R KV+L VW
Sbjct: 13 DLLKKRSENDPFLKRLITGDEKWVVYNNIKRKRSWSRPRESAQTTSKAGIHRKKVLLLVW 72
Query: 188 WDWKGIIHYELLPPGRAIDSELYCEQLMRLKQGVERKRPELINRRGVVFHHDNARPHTSL 367
WD KGI+++ELLPP R I+S +Y E L +L +E KR EL NR+GVVFHHD+ARPHT L
Sbjct: 73 WDHKGIVYFELLPPNRTINSVVYIEHLTKLNNAIEEKRFELTNRKGVVFHHDDARPHTYL 132
Query: 368 ATKQKSRELGWEVLMH 415
T+QK ELGW+VL H
Sbjct: 133 VTRQKLLELGWDVLPH 148
>EF493864-1|ABP65286.1| 247|Apis mellifera triosephoshpate
isomerase protein.
Length = 247
Score = 27.5 bits (58), Expect = 0.15
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +2
Query: 74 WITYDKNVRKRSLSKAGQASQTVAKSELT 160
++TY KN+ ++S AGQ + VAK T
Sbjct: 46 YLTYAKNILPNNISIAGQNTYKVAKGAFT 74
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 23.8 bits (49), Expect = 1.8
Identities = 9/25 (36%), Positives = 14/25 (56%), Gaps = 1/25 (4%)
Frame = +3
Query: 492 G*HH-ERTAKTNCRGILIRSPKIFI 563
G HH +R C G+ +R P +F+
Sbjct: 381 GSHHGQRVMVRTCNGLELRDPSLFV 405
>AY588474-1|AAT94401.1| 104|Apis mellifera defensin 2 protein.
Length = 104
Score = 23.0 bits (47), Expect = 3.2
Identities = 12/39 (30%), Positives = 18/39 (46%)
Frame = -1
Query: 230 LVVTAHSE*CPSNPTTHTASPCCELTLISPQSVKPDRPL 114
L+ H+ C S P P EL I ++++PD L
Sbjct: 10 LIAIVHAS-CASVPKVVYDGPIYELRQIEEENIEPDTEL 47
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 23.0 bits (47), Expect = 3.2
Identities = 19/73 (26%), Positives = 28/73 (38%)
Frame = -1
Query: 236 PCLVVTAHSE*CPSNPTTHTASPCCELTLISPQSVKPDRPLTTTFFARSCRT*SNFHHQL 57
P L V + P P T TL+ V PD +F R + FH L
Sbjct: 1488 PVLSVRTQGQ-APGIPPAATFLSPNSTTLVLRLHVWPDNGCPILYFTIQYRPINEFHWTL 1546
Query: 56 SASSKMVRFHYVV 18
++S ++ +VV
Sbjct: 1547 VSNSVKMQRRFVV 1559
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 23.0 bits (47), Expect = 3.2
Identities = 19/73 (26%), Positives = 28/73 (38%)
Frame = -1
Query: 236 PCLVVTAHSE*CPSNPTTHTASPCCELTLISPQSVKPDRPLTTTFFARSCRT*SNFHHQL 57
P L V + P P T TL+ V PD +F R + FH L
Sbjct: 1484 PVLSVRTQGQ-APGIPPAATFLSPNSTTLVLRLHVWPDNGCPILYFTIQYRPINEFHWTL 1542
Query: 56 SASSKMVRFHYVV 18
++S ++ +VV
Sbjct: 1543 VSNSVKMQRRFVV 1555
>DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 469
Score = 22.6 bits (46), Expect = 4.2
Identities = 6/18 (33%), Positives = 13/18 (72%)
Frame = -2
Query: 91 LVVRDPIFITSYLLLQKW 38
+++ D + +T Y L++KW
Sbjct: 179 IILADELHLTEYKLVEKW 196
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 22.6 bits (46), Expect = 4.2
Identities = 11/32 (34%), Positives = 13/32 (40%)
Frame = -1
Query: 203 CPSNPTTHTASPCCELTLISPQSVKPDRPLTT 108
C NP THT + C L + P R T
Sbjct: 430 CGPNPCTHTTTNGCTAELRKKEPPHPIRVAKT 461
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 22.6 bits (46), Expect = 4.2
Identities = 11/32 (34%), Positives = 13/32 (40%)
Frame = -1
Query: 203 CPSNPTTHTASPCCELTLISPQSVKPDRPLTT 108
C NP THT + C L + P R T
Sbjct: 416 CGPNPCTHTTTNGCTAELRKKEPPHPIRVAKT 447
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 22.6 bits (46), Expect = 4.2
Identities = 11/32 (34%), Positives = 13/32 (40%)
Frame = -1
Query: 203 CPSNPTTHTASPCCELTLISPQSVKPDRPLTT 108
C NP THT + C L + P R T
Sbjct: 450 CGPNPCTHTTTNGCTAELRKKEPPHPIRVAKT 481
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 22.6 bits (46), Expect = 4.2
Identities = 11/32 (34%), Positives = 13/32 (40%)
Frame = -1
Query: 203 CPSNPTTHTASPCCELTLISPQSVKPDRPLTT 108
C NP THT + C L + P R T
Sbjct: 399 CGPNPCTHTTTNGCTAELRKKEPPHPIRVAKT 430
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 214,885
Number of Sequences: 438
Number of extensions: 4480
Number of successful extensions: 18
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24275400
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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