Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-5889
         (828 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY062208-1|AAL58569.1|  503|Anopheles gambiae cytochrome P450 CY...    25   2.2  
CR954257-6|CAJ14157.1|  375|Anopheles gambiae RrnaAD, ribosomal ...    24   5.0  
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            24   6.6  
U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra...    23   8.7  

>AY062208-1|AAL58569.1|  503|Anopheles gambiae cytochrome P450
           CYP6M1 protein.
          Length = 503

 Score = 25.4 bits (53), Expect = 2.2
 Identities = 12/30 (40%), Positives = 14/30 (46%)
 Frame = -3

Query: 391 KQLYLGEKTKPHPKLMFYLHGTKIIQVKYH 302
           KQ Y  E+  PHPK  F+    K    K H
Sbjct: 26  KQSYWKERGVPHPKPTFFFGSFKDAGTKIH 55


>CR954257-6|CAJ14157.1|  375|Anopheles gambiae RrnaAD, ribosomal RNA
           adenine dimethylaseprotein.
          Length = 375

 Score = 24.2 bits (50), Expect = 5.0
 Identities = 15/37 (40%), Positives = 22/37 (59%)
 Frame = +3

Query: 153 KRLSHLP*IIRSKS*LFSLSREIGILVLATSLFSYLS 263
           K L +L   I  +S LFSL R    LV++  LFS+++
Sbjct: 111 KYLRYLMNSITQQSELFSLGRYEMFLVMSPLLFSHIA 147


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 23.8 bits (49), Expect = 6.6
 Identities = 8/19 (42%), Positives = 15/19 (78%)
 Frame = +3

Query: 402 MSGTP*QCDNFSIFILLLY 458
           ++GTP Q D F++ +L+L+
Sbjct: 309 VTGTPAQQDRFNVLLLILF 327


>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 1049

 Score = 23.4 bits (48), Expect = 8.7
 Identities = 7/21 (33%), Positives = 15/21 (71%)
 Frame = +3

Query: 423 CDNFSIFILLLYFESQLSANI 485
           C+N  ++++++Y   QLS+ I
Sbjct: 178 CNNAHLYVMVVYIPPQLSSEI 198


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 785,647
Number of Sequences: 2352
Number of extensions: 15072
Number of successful extensions: 27
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 88150236
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)