Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-5888
         (579 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U28424-1|AAC50502.1|  504|Homo sapiens p58 protein.                    33   0.96 
BC047936-1|AAH47936.2|  504|Homo sapiens DnaJ (Hsp40) homolog, s...    33   0.96 
AY795482-1|AAV40838.1|  504|Homo sapiens DnaJ (Hsp40) homolog, s...    33   0.96 
AL138955-1|CAH70090.1|  504|Homo sapiens DnaJ (Hsp40) homolog, s...    33   0.96 
BC104213-1|AAI04214.1|  228|Homo sapiens ENDOGL1 protein protein.      29   9.0  
BC104212-1|AAI04213.1|  228|Homo sapiens ENDOGL1 protein protein.      29   9.0  
AB020523-1|BAA76752.1|  368|Homo sapiens endonuclease G-like pro...    29   9.0  

>U28424-1|AAC50502.1|  504|Homo sapiens p58 protein.
          Length = 504

 Score = 32.7 bits (71), Expect = 0.96
 Identities = 30/109 (27%), Positives = 54/109 (49%), Gaps = 5/109 (4%)
 Frame = +1

Query: 121 DNVNLYEVLSNSRLLQP-YIKCILDKDRCAPDAKELKEHIREALETECAKCTEAQKKGTR 297
           DNVN  +  + + L++  Y + I D +  A +  E  + IRE LE       ++QK+   
Sbjct: 338 DNVNALKDRAEAYLIEEMYDEAIQDYET-AQEHNENDQQIREGLEKAQRLLKQSQKRDYY 396

Query: 298 RVIGHLINNES----KSWNELTAKYDPENKFTAKYEKELREIKA*DTNA 432
           +++G   N +     K++ +L  ++ P+N F  + EK+  E K  D  A
Sbjct: 397 KILGVKRNAKKQEIIKAYRKLALQWHPDN-FQNEEEKKKAEKKFIDIAA 444


>BC047936-1|AAH47936.2|  504|Homo sapiens DnaJ (Hsp40) homolog,
           subfamily C, member 3 protein.
          Length = 504

 Score = 32.7 bits (71), Expect = 0.96
 Identities = 30/109 (27%), Positives = 54/109 (49%), Gaps = 5/109 (4%)
 Frame = +1

Query: 121 DNVNLYEVLSNSRLLQP-YIKCILDKDRCAPDAKELKEHIREALETECAKCTEAQKKGTR 297
           DNVN  +  + + L++  Y + I D +  A +  E  + IRE LE       ++QK+   
Sbjct: 338 DNVNALKDRAEAYLIEEMYDEAIQDYET-AQEHNENDQQIREGLEKAQRLLKQSQKRDYY 396

Query: 298 RVIGHLINNES----KSWNELTAKYDPENKFTAKYEKELREIKA*DTNA 432
           +++G   N +     K++ +L  ++ P+N F  + EK+  E K  D  A
Sbjct: 397 KILGVKRNAKKQEIIKAYRKLALQWHPDN-FQNEEEKKKAEKKFIDIAA 444


>AY795482-1|AAV40838.1|  504|Homo sapiens DnaJ (Hsp40) homolog,
           subfamily C, member 3 protein.
          Length = 504

 Score = 32.7 bits (71), Expect = 0.96
 Identities = 30/109 (27%), Positives = 54/109 (49%), Gaps = 5/109 (4%)
 Frame = +1

Query: 121 DNVNLYEVLSNSRLLQP-YIKCILDKDRCAPDAKELKEHIREALETECAKCTEAQKKGTR 297
           DNVN  +  + + L++  Y + I D +  A +  E  + IRE LE       ++QK+   
Sbjct: 338 DNVNALKDRAEAYLIEEMYDEAIQDYET-AQEHNENDQQIREGLEKAQRLLKQSQKRDYY 396

Query: 298 RVIGHLINNES----KSWNELTAKYDPENKFTAKYEKELREIKA*DTNA 432
           +++G   N +     K++ +L  ++ P+N F  + EK+  E K  D  A
Sbjct: 397 KILGVKRNAKKQEIIKAYRKLALQWHPDN-FQNEEEKKKAEKKFIDIAA 444


>AL138955-1|CAH70090.1|  504|Homo sapiens DnaJ (Hsp40) homolog,
           subfamily C, member 3 protein.
          Length = 504

 Score = 32.7 bits (71), Expect = 0.96
 Identities = 30/109 (27%), Positives = 54/109 (49%), Gaps = 5/109 (4%)
 Frame = +1

Query: 121 DNVNLYEVLSNSRLLQP-YIKCILDKDRCAPDAKELKEHIREALETECAKCTEAQKKGTR 297
           DNVN  +  + + L++  Y + I D +  A +  E  + IRE LE       ++QK+   
Sbjct: 338 DNVNALKDRAEAYLIEEMYDEAIQDYET-AQEHNENDQQIREGLEKAQRLLKQSQKRDYY 396

Query: 298 RVIGHLINNES----KSWNELTAKYDPENKFTAKYEKELREIKA*DTNA 432
           +++G   N +     K++ +L  ++ P+N F  + EK+  E K  D  A
Sbjct: 397 KILGVKRNAKKQEIIKAYRKLALQWHPDN-FQNEEEKKKAEKKFIDIAA 444


>BC104213-1|AAI04214.1|  228|Homo sapiens ENDOGL1 protein protein.
          Length = 228

 Score = 29.5 bits (63), Expect = 9.0
 Identities = 15/44 (34%), Positives = 27/44 (61%), Gaps = 2/44 (4%)
 Frame = +1

Query: 292 TRRVIG--HLINNESKSWNELTAKYDPENKFTAKYEKELREIKA 417
           TR++ G   ++  E    N   A+ +P++ F ++YEK+L E+KA
Sbjct: 173 TRKIEGARSVLRLEKIMENLKNAEIEPDDYFMSRYEKKLEELKA 216


>BC104212-1|AAI04213.1|  228|Homo sapiens ENDOGL1 protein protein.
          Length = 228

 Score = 29.5 bits (63), Expect = 9.0
 Identities = 15/44 (34%), Positives = 27/44 (61%), Gaps = 2/44 (4%)
 Frame = +1

Query: 292 TRRVIG--HLINNESKSWNELTAKYDPENKFTAKYEKELREIKA 417
           TR++ G   ++  E    N   A+ +P++ F ++YEK+L E+KA
Sbjct: 173 TRKIEGARSVLRLEKIMENLKNAEIEPDDYFMSRYEKKLEELKA 216


>AB020523-1|BAA76752.1|  368|Homo sapiens endonuclease G-like
           protein-1 protein.
          Length = 368

 Score = 29.5 bits (63), Expect = 9.0
 Identities = 15/44 (34%), Positives = 27/44 (61%), Gaps = 2/44 (4%)
 Frame = +1

Query: 292 TRRVIG--HLINNESKSWNELTAKYDPENKFTAKYEKELREIKA 417
           TR++ G   ++  E    N   A+ +P++ F ++YEK+L E+KA
Sbjct: 313 TRKIEGARSVLRLEKIMENLKNAEIEPDDYFMSRYEKKLEELKA 356


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 78,337,872
Number of Sequences: 237096
Number of extensions: 1527660
Number of successful extensions: 3343
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 3252
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3341
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5985693436
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)